| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715175
Identifier: 119715175
GI number: 119715175
Start: 977981
End: 978487
Strand: Direct
Name: 119715175
Synonym: Noca_0930
Alternate gene names: NA
Gene position: 977981-978487 (Clockwise)
Preceding gene: 119715174
Following gene: 119715176
Centisome position: 19.62
GC content: 73.96
Gene sequence:
>507_bases GTGACCACCTGCTGGAACAATGGCCGGGTGATCGACCCCGAGGACATCGCCGCTGTCGAGGCCCAGCTCGGTCGTGAGCC CCGGGCCATCCACGAGGTCGGCCACCGCTGCCCGTGCGGCAACCCGGATGTCGTCACCACCGAGCCCCGGCTCCCCAACG GCACCCCGTTCCCGACGACCTTCTACCTGACCTGCCCGCGGGCGGCCTCGCGGATCGGGACGCTCGAGGGCTCGGGGCTG ATGAAGCAGATGCAGGACCGGCTCGCGGACGACCCGGACCTGGCGGCGGCGTACCGCCGCGCGCACGAGCGCTACCTCGA GGCCCGGGCCGCGTTGGGGTCGGTGCCCGAGATCGAGGGCATCTCCGCGGGCGGCATGCCGGACCGGGTCAAGTGCCTGC ACGTGCTCGCCGGCCAGGCTCTCGCCCAGGGCCGCGGCGTCAACCCGCTGGGCGACGAGGTCCTCGACCTCCTCGGCCCC TGGTGGGGGTCCGGCCCGTGCGTGTAG
Upstream 100 bases:
>100_bases GGGCGTGGTGGTCCACGGCCTGGGAGTCGGTCAGGACGGCCGGCGTCCCGCCGGCCGCCGAGCCGGAGCCGTCGACGAAG ATCACCGGCACCGACTGAGC
Downstream 100 bases:
>100_bases CGCCCGTCGCAGCCATCGACTGCGGCACCAACACGATCAAGCTCCTGGTGGGCACCGTGCCCGAGGCGGGGGGCCTCGAG GTCGACGTGCGGGAGATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTTCWNNGRVIDPEDIAAVEAQLGREPRAIHEVGHRCPCGNPDVVTTEPRLPNGTPFPTTFYLTCPRAASRIGTLEGSGL MKQMQDRLADDPDLAAAYRRAHERYLEARAALGSVPEIEGISAGGMPDRVKCLHVLAGQALAQGRGVNPLGDEVLDLLGP WWGSGPCV
Sequences:
>Translated_168_residues MTTCWNNGRVIDPEDIAAVEAQLGREPRAIHEVGHRCPCGNPDVVTTEPRLPNGTPFPTTFYLTCPRAASRIGTLEGSGL MKQMQDRLADDPDLAAAYRRAHERYLEARAALGSVPEIEGISAGGMPDRVKCLHVLAGQALAQGRGVNPLGDEVLDLLGP WWGSGPCV >Mature_167_residues TTCWNNGRVIDPEDIAAVEAQLGREPRAIHEVGHRCPCGNPDVVTTEPRLPNGTPFPTTFYLTCPRAASRIGTLEGSGLM KQMQDRLADDPDLAAAYRRAHERYLEARAALGSVPEIEGISAGGMPDRVKCLHVLAGQALAQGRGVNPLGDEVLDLLGPW WGSGPCV
Specific function: Unknown
COG id: COG1507
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18024; Mature: 17892
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTCWNNGRVIDPEDIAAVEAQLGREPRAIHEVGHRCPCGNPDVVTTEPRLPNGTPFPTT CCEECCCCEEECHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCEE FYLTCPRAASRIGTLEGSGLMKQMQDRLADDPDLAAAYRRAHERYLEARAALGSVPEIEG EEEECCHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC ISAGGMPDRVKCLHVLAGQALAQGRGVNPLGDEVLDLLGPWWGSGPCV CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTCWNNGRVIDPEDIAAVEAQLGREPRAIHEVGHRCPCGNPDVVTTEPRLPNGTPFPTT CEECCCCEEECHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCEE FYLTCPRAASRIGTLEGSGLMKQMQDRLADDPDLAAAYRRAHERYLEARAALGSVPEIEG EEEECCHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC ISAGGMPDRVKCLHVLAGQALAQGRGVNPLGDEVLDLLGPWWGSGPCV CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA