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The map label for this gene is ycjP [H]

Identifier: 119715116

GI number: 119715116

Start: 909811

End: 910665

Strand: Direct

Name: ycjP [H]

Synonym: Noca_0871

Alternate gene names: 119715116

Gene position: 909811-910665 (Clockwise)

Preceding gene: 119715115

Following gene: 119715117

Centisome position: 18.25

GC content: 68.77

Gene sequence:

>855_bases
ATGAGACCGAGCCGGGCCTACCTCATCTGGATCCACGTGGCCGCCGTGGTCATGGCGCTGGTCGTCCTCGCCCCCTTCGC
CTGGCTGCTGATCTCCAGCATCTCGCCGTCCTCCGAGCTGCTCTCGCCGCACCCGCACTGGTGGCCCGACCACCCGACGC
TCGAGCGGTACCGCGCGATCTTCTCCTCCGGCAGCGGCGGCGGGGACGTGGCCGCCAACTTCCGCGCCGCGATGATCAAT
AGCTTCGTGGTCGCGTCCGCCACCACCGCGGTCTCGCTGGTCGTCGGCGTCCTCGGGGGCTATGCCTTCGCCCGCCTGCG
GTTCCGGTTCCGGCGGACCTCGCTGTTCGCGTTCCTGGCGATCTACATGCTCCCCCCGATCGCCCTGGTGATCCCGCTGT
ACCTGGCGCTGGCCAACCTCGGGCTGCTGGACACGAAGATCGGCCTCGTCATCACCTACGGCTCGATCGTCACCCCGTTC
TGCCTGTGGACGATGAGCAACTACTTCCTGAGCCTGCCCGCCGGCCTCGAGGAGGCCGCCCGCGTCGACGGGGCCAGCCG
GATGGGGGCGCTCTGGTGGGTGATCCTCCCGCTCGCGCGGCCGGGGATCCTGACCACCGGCATGTTCGGGTTCCTGCTGG
CCTGGGACGAGTTCCTCTACGCCCTGATCTTCACCTCGAGCACGGACGCGAAGACCATCCCGGTCGCCATCGCCGAGTTC
ACCGGCAAGCACTCCTCCGACTTCGGGCTGATCGCCGCCGGAGGAGTGCTGGCCACCATCCCGCCCGTCATCCTCGCGCT
GGTCTTCCAGCGCTACATCGTCGGAGGCCTCACCTCCGGAGCAGTGAAAGGCTGA

Upstream 100 bases:

>100_bases
GGTACGGCGCCGCGCTGGCGTACCTGATCGTGCTGGCCGTCTTCGCGTTGGCCATGGCGTACCTGCGGATCCTCCGTCAG
AACGAGCTGGCAGGTGTCGA

Downstream 100 bases:

>100_bases
TCACGAATGCGATTCCCCGATGGCATCGACGCGCAACCGGAGGTGCTGCGGACCAGCGCCGCAGCCGTCCGCGAGGCGCT
GCAGCGGATCCCCCCGATCG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MRPSRAYLIWIHVAAVVMALVVLAPFAWLLISSISPSSELLSPHPHWWPDHPTLERYRAIFSSGSGGGDVAANFRAAMIN
SFVVASATTAVSLVVGVLGGYAFARLRFRFRRTSLFAFLAIYMLPPIALVIPLYLALANLGLLDTKIGLVITYGSIVTPF
CLWTMSNYFLSLPAGLEEAARVDGASRMGALWWVILPLARPGILTTGMFGFLLAWDEFLYALIFTSSTDAKTIPVAIAEF
TGKHSSDFGLIAAGGVLATIPPVILALVFQRYIVGGLTSGAVKG

Sequences:

>Translated_284_residues
MRPSRAYLIWIHVAAVVMALVVLAPFAWLLISSISPSSELLSPHPHWWPDHPTLERYRAIFSSGSGGGDVAANFRAAMIN
SFVVASATTAVSLVVGVLGGYAFARLRFRFRRTSLFAFLAIYMLPPIALVIPLYLALANLGLLDTKIGLVITYGSIVTPF
CLWTMSNYFLSLPAGLEEAARVDGASRMGALWWVILPLARPGILTTGMFGFLLAWDEFLYALIFTSSTDAKTIPVAIAEF
TGKHSSDFGLIAAGGVLATIPPVILALVFQRYIVGGLTSGAVKG
>Mature_284_residues
MRPSRAYLIWIHVAAVVMALVVLAPFAWLLISSISPSSELLSPHPHWWPDHPTLERYRAIFSSGSGGGDVAANFRAAMIN
SFVVASATTAVSLVVGVLGGYAFARLRFRFRRTSLFAFLAIYMLPPIALVIPLYLALANLGLLDTKIGLVITYGSIVTPF
CLWTMSNYFLSLPAGLEEAARVDGASRMGALWWVILPLARPGILTTGMFGFLLAWDEFLYALIFTSSTDAKTIPVAIAEF
TGKHSSDFGLIAAGGVLATIPPVILALVFQRYIVGGLTSGAVKG

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=265, Percent_Identity=33.5849056603774, Blast_Score=146, Evalue=1e-36,
Organism=Escherichia coli, GI1789860, Length=234, Percent_Identity=29.4871794871795, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1790464, Length=211, Percent_Identity=31.2796208530806, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30537; Mature: 30537

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPSRAYLIWIHVAAVVMALVVLAPFAWLLISSISPSSELLSPHPHWWPDHPTLERYRAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHHH
FSSGSGGGDVAANFRAAMINSFVVASATTAVSLVVGVLGGYAFARLRFRFRRTSLFAFLA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYMLPPIALVIPLYLALANLGLLDTKIGLVITYGSIVTPFCLWTMSNYFLSLPAGLEEAA
HHHHHHHHHHHHHHHHHHHCCHHHHCHHHEEEEHHHHHHHHHHHHHHHHEECCCCHHHHH
RVDGASRMGALWWVILPLARPGILTTGMFGFLLAWDEFLYALIFTSSTDAKTIPVAIAEF
HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
TGKHSSDFGLIAAGGVLATIPPVILALVFQRYIVGGLTSGAVKG
CCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRPSRAYLIWIHVAAVVMALVVLAPFAWLLISSISPSSELLSPHPHWWPDHPTLERYRAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHHH
FSSGSGGGDVAANFRAAMINSFVVASATTAVSLVVGVLGGYAFARLRFRFRRTSLFAFLA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYMLPPIALVIPLYLALANLGLLDTKIGLVITYGSIVTPFCLWTMSNYFLSLPAGLEEAA
HHHHHHHHHHHHHHHHHHHCCHHHHCHHHEEEEHHHHHHHHHHHHHHHHEECCCCHHHHH
RVDGASRMGALWWVILPLARPGILTTGMFGFLLAWDEFLYALIFTSSTDAKTIPVAIAEF
HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
TGKHSSDFGLIAAGGVLATIPPVILALVFQRYIVGGLTSGAVKG
CCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]