| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715092
Identifier: 119715092
GI number: 119715092
Start: 886380
End: 886730
Strand: Reverse
Name: 119715092
Synonym: Noca_0847
Alternate gene names: NA
Gene position: 886730-886380 (Counterclockwise)
Preceding gene: 119715093
Following gene: 119715091
Centisome position: 17.78
GC content: 70.09
Gene sequence:
>351_bases ATGGATGCTTCCATCGACTGGTCGGACCTCCCGGTGCACGCCCCGATCACGGGGATCACCGGGCAGGTCCGGCTGGGAGC GGAGCTCTCCGCCGCTCTCTTCCGGCTCAGCCCAGGCGCGGTCGTGCCGCGGCACCACCACGTGAACGAGGAGTTCGGCC AGGTGCTCGAGGGCAGCCTCGAGCTGGAGGTGGACGCCGAGGTGTCCCGCCTCGCCGTCGGGGACAGCTTCCTGATCCCC GGGAACGTCCCCCATGCGGCGGTGGCCGGTGCCGACGGCTGTCTCCTCCTCGAGTGCTACGCGCCACCTCGCAACCCGTT CCTTCCCGCAGAACCAGGGGCATCCTCATGA
Upstream 100 bases:
>100_bases CCCCGGAGGGCGGCTGGAAGGTCGCCCTGGTCAAGGACCCGGACGGGGTCGTCGTCCAGGTCACCGAGCTGCTCGCCGCC CCGGCGGCGGGCTGATCACC
Downstream 100 bases:
>100_bases CGACCACGACGGACGCTTCGGACCTGGCGGTCTACGACCTCTTCGTGGACGGCCGCTGGCAGCCCTCGCGGACCGGGCGC ACCTCGGAACGGACCAGTCC
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MDASIDWSDLPVHAPITGITGQVRLGAELSAALFRLSPGAVVPRHHHVNEEFGQVLEGSLELEVDAEVSRLAVGDSFLIP GNVPHAAVAGADGCLLLECYAPPRNPFLPAEPGASS
Sequences:
>Translated_116_residues MDASIDWSDLPVHAPITGITGQVRLGAELSAALFRLSPGAVVPRHHHVNEEFGQVLEGSLELEVDAEVSRLAVGDSFLIP GNVPHAAVAGADGCLLLECYAPPRNPFLPAEPGASS >Mature_116_residues MDASIDWSDLPVHAPITGITGQVRLGAELSAALFRLSPGAVVPRHHHVNEEFGQVLEGSLELEVDAEVSRLAVGDSFLIP GNVPHAAVAGADGCLLLECYAPPRNPFLPAEPGASS
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12087; Mature: 12087
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDASIDWSDLPVHAPITGITGQVRLGAELSAALFRLSPGAVVPRHHHVNEEFGQVLEGSL CCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCE ELEVDAEVSRLAVGDSFLIPGNVPHAAVAGADGCLLLECYAPPRNPFLPAEPGASS EEEECCCEEEEECCCCEEECCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MDASIDWSDLPVHAPITGITGQVRLGAELSAALFRLSPGAVVPRHHHVNEEFGQVLEGSL CCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCE ELEVDAEVSRLAVGDSFLIPGNVPHAAVAGADGCLLLECYAPPRNPFLPAEPGASS EEEECCCEEEEECCCCEEECCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA