Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119715088

Identifier: 119715088

GI number: 119715088

Start: 882097

End: 882534

Strand: Reverse

Name: 119715088

Synonym: Noca_0843

Alternate gene names: NA

Gene position: 882534-882097 (Counterclockwise)

Preceding gene: 119715089

Following gene: 119715087

Centisome position: 17.7

GC content: 72.37

Gene sequence:

>438_bases
ATGAGCACGCCCGCGGACCGCCGGCTCCGGCCGGTGTCCTCCCCGAGCCCGGATGCCGTGCCGTTCTGGGAGGCGGCGAC
ACGGCACGCGCTGGTGCTCCCCCACTGCCTGGACTGTGACGAGCCGTTCTTCTACCCCCGCGCCCTGTGCCCCGCCTGCG
GCAGCCGGAACCTGGCCTGGGTGACGGCGAGTGGGCGCGGAGTCCTGCACTCGTTCTGCGTGCAGTACCACTGCGACGTA
CCGGGTCTCGCCGAGGCCGTCCCGTTCGTCACCGCCCTCGTCGACCTCGCCGAGGGACCGCGGATGATGGGCTTCCTCCT
GGACGCCCCGGAAGACCCGGAGGCCATCTCCTGTGACGTCGCGGTGACGGTGGAGTTCGTGGACCTCGACGACGGGCACG
CCGCGGTCGGGTTCCGAGCCGTCCCGCGCGAGCCATGA

Upstream 100 bases:

>100_bases
AGTGCGACGACCGTCAGGTGCCGGCGGCGGAGGTGGCCCTCGTCAACGGCATGGGCGGCTATCTGTCCAGCTCCGCCACG
GCGATCCTGGGCAGGCGCTG

Downstream 100 bases:

>100_bases
GCGCGACCAAGCTGCCGACGTGGCTGGTCTCCAGCCCGCACCGGCGTACCCCTCCCGATCCGGCGGACCCGTCCCGCCGC
CCGCACGGCACGCACCACGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSTPADRRLRPVSSPSPDAVPFWEAATRHALVLPHCLDCDEPFFYPRALCPACGSRNLAWVTASGRGVLHSFCVQYHCDV
PGLAEAVPFVTALVDLAEGPRMMGFLLDAPEDPEAISCDVAVTVEFVDLDDGHAAVGFRAVPREP

Sequences:

>Translated_145_residues
MSTPADRRLRPVSSPSPDAVPFWEAATRHALVLPHCLDCDEPFFYPRALCPACGSRNLAWVTASGRGVLHSFCVQYHCDV
PGLAEAVPFVTALVDLAEGPRMMGFLLDAPEDPEAISCDVAVTVEFVDLDDGHAAVGFRAVPREP
>Mature_144_residues
STPADRRLRPVSSPSPDAVPFWEAATRHALVLPHCLDCDEPFFYPRALCPACGSRNLAWVTASGRGVLHSFCVQYHCDVP
GLAEAVPFVTALVDLAEGPRMMGFLLDAPEDPEAISCDVAVTVEFVDLDDGHAAVGFRAVPREP

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15647; Mature: 15516

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPADRRLRPVSSPSPDAVPFWEAATRHALVLPHCLDCDEPFFYPRALCPACGSRNLAW
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEECCCCCCCCCCCCCHHHHHHCCCCCCEEE
VTASGRGVLHSFCVQYHCDVPGLAEAVPFVTALVDLAEGPRMMGFLLDAPEDPEAISCDV
EEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEE
AVTVEFVDLDDGHAAVGFRAVPREP
EEEEEEEECCCCCEEEEEECCCCCC
>Mature Secondary Structure 
STPADRRLRPVSSPSPDAVPFWEAATRHALVLPHCLDCDEPFFYPRALCPACGSRNLAW
CCCCCCCCCCCCCCCCCCCCCHHHHCCCEEECCCCCCCCCCCCCHHHHHHCCCCCCEEE
VTASGRGVLHSFCVQYHCDVPGLAEAVPFVTALVDLAEGPRMMGFLLDAPEDPEAISCDV
EEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEE
AVTVEFVDLDDGHAAVGFRAVPREP
EEEEEEEECCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA