| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is yjdI [C]
Identifier: 119715069
GI number: 119715069
Start: 867678
End: 867911
Strand: Reverse
Name: yjdI [C]
Synonym: Noca_0824
Alternate gene names: 119715069
Gene position: 867911-867678 (Counterclockwise)
Preceding gene: 119715070
Following gene: 119715068
Centisome position: 17.41
GC content: 71.37
Gene sequence:
>234_bases ATGACCAGTAAGCGCTACACCGGCCCGCTCGTCGACGTCACCGACGAGCGGGAGCTGTGCATCCACTCCGCGGTGTGCGT GCGTGGCATGCCCGCGGTGTTCGACACCAGTCGCCGGCCGTGGATCGACCCGAGGGAGGCCGCCACCCCCGACCTCGCCG ACCAGCTGCGCGCCGTGGTGGCGCGGTGCCCGTCAGGTGCGCTGCAGATCGTGGAGCACGGGGAGGACCAGTAG
Upstream 100 bases:
>100_bases GCCTCGATGATCAACGCGTTCAACCGGGTCTCGATCCTCAGCCACCACCCGGTCACCCACCGGGAGTCGTTCGGCGCGCC ACCCGTCAGGAGGGACACCC
Downstream 100 bases:
>100_bases CGTTCCGGACCCAGCCCTCCGGCCGGCGAGACGTCAGCCGTGCTGGACGAAGCCAGCCACGATGCGGTTGAGCTCGTCGG CGTGGTCGAGCGGGGGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MTSKRYTGPLVDVTDERELCIHSAVCVRGMPAVFDTSRRPWIDPREAATPDLADQLRAVVARCPSGALQIVEHGEDQ
Sequences:
>Translated_77_residues MTSKRYTGPLVDVTDERELCIHSAVCVRGMPAVFDTSRRPWIDPREAATPDLADQLRAVVARCPSGALQIVEHGEDQ >Mature_76_residues TSKRYTGPLVDVTDERELCIHSAVCVRGMPAVFDTSRRPWIDPREAATPDLADQLRAVVARCPSGALQIVEHGEDQ
Specific function: Unknown
COG id: COG3592
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8506; Mature: 8375
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKRYTGPLVDVTDERELCIHSAVCVRGMPAVFDTSRRPWIDPREAATPDLADQLRAVV CCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHH ARCPSGALQIVEHGEDQ HHCCCCHHHHHHCCCCC >Mature Secondary Structure TSKRYTGPLVDVTDERELCIHSAVCVRGMPAVFDTSRRPWIDPREAATPDLADQLRAVV CCCCCCCCEECCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHH ARCPSGALQIVEHGEDQ HHCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA