Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is yjdI [C]

Identifier: 119715069

GI number: 119715069

Start: 867678

End: 867911

Strand: Reverse

Name: yjdI [C]

Synonym: Noca_0824

Alternate gene names: 119715069

Gene position: 867911-867678 (Counterclockwise)

Preceding gene: 119715070

Following gene: 119715068

Centisome position: 17.41

GC content: 71.37

Gene sequence:

>234_bases
ATGACCAGTAAGCGCTACACCGGCCCGCTCGTCGACGTCACCGACGAGCGGGAGCTGTGCATCCACTCCGCGGTGTGCGT
GCGTGGCATGCCCGCGGTGTTCGACACCAGTCGCCGGCCGTGGATCGACCCGAGGGAGGCCGCCACCCCCGACCTCGCCG
ACCAGCTGCGCGCCGTGGTGGCGCGGTGCCCGTCAGGTGCGCTGCAGATCGTGGAGCACGGGGAGGACCAGTAG

Upstream 100 bases:

>100_bases
GCCTCGATGATCAACGCGTTCAACCGGGTCTCGATCCTCAGCCACCACCCGGTCACCCACCGGGAGTCGTTCGGCGCGCC
ACCCGTCAGGAGGGACACCC

Downstream 100 bases:

>100_bases
CGTTCCGGACCCAGCCCTCCGGCCGGCGAGACGTCAGCCGTGCTGGACGAAGCCAGCCACGATGCGGTTGAGCTCGTCGG
CGTGGTCGAGCGGGGGCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MTSKRYTGPLVDVTDERELCIHSAVCVRGMPAVFDTSRRPWIDPREAATPDLADQLRAVVARCPSGALQIVEHGEDQ

Sequences:

>Translated_77_residues
MTSKRYTGPLVDVTDERELCIHSAVCVRGMPAVFDTSRRPWIDPREAATPDLADQLRAVVARCPSGALQIVEHGEDQ
>Mature_76_residues
TSKRYTGPLVDVTDERELCIHSAVCVRGMPAVFDTSRRPWIDPREAATPDLADQLRAVVARCPSGALQIVEHGEDQ

Specific function: Unknown

COG id: COG3592

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8506; Mature: 8375

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKRYTGPLVDVTDERELCIHSAVCVRGMPAVFDTSRRPWIDPREAATPDLADQLRAVV
CCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHH
ARCPSGALQIVEHGEDQ
HHCCCCHHHHHHCCCCC
>Mature Secondary Structure 
TSKRYTGPLVDVTDERELCIHSAVCVRGMPAVFDTSRRPWIDPREAATPDLADQLRAVV
CCCCCCCCEECCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHH
ARCPSGALQIVEHGEDQ
HHCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA