Click here to switch to the map view.

The map label for this gene is ytxE [H]

Identifier: 119714995

GI number: 119714995

Start: 795644

End: 796552

Strand: Reverse

Name: ytxE [H]

Synonym: Noca_0748

Alternate gene names: 119714995

Gene position: 796552-795644 (Counterclockwise)

Preceding gene: 119714996

Following gene: 119714994

Centisome position: 15.98

GC content: 69.86

Gene sequence:

>909_bases
ATGACCGCCCCACCACGGCGCCGCAAGAAGCCACCGGAGGAGCCGGAGCACGACAACCACGAGCGGTGGCTCGTCACCTA
CGCCGACATGCTCACGCTGCTGATGGTGCTGTTCATCGTGATGTTCGCGATGAGCCAGGTCGACGAGGCGAAGTACAACG
CCCTCAAGTCCGGACTGGCGGAGGGCTTCGGCGCGGAGAGCTCGATCATGACCGGCAGCACGTCCGTGCTCGAGGACAAC
CTCGCCGAGACCGGCCCGGACTACGTCAGCAGCCAGGCGTTCCAGGCGATGCCCGCCGACCAGCAGCAGCTCGTCCGGGC
CGCGGTCACCGCCGAGGAGCGGCGGCGCCTCCAGGCGCAGTACGCCGAGGCCGCCGCCGAGGCCAAGCGGCTCGAGGCGG
TCCGCAAGCAGCTGATGAAGGCCCTGCGCGCGGCCGGTCTCGCCAAGGACGTGCAGGCCACCATCGACGACCGCGGCCTC
GTGGTCAGCCTGGTGTCCCGACATGTCGTGTTCGAGCCGGACATCGCCCAGCTGAGCGCGCGCGGCGAACGGGTCGTCGA
CACGCTCTCCCGCGTGCTCCGAGACGTGCCGAACGCGCTGCGGATCGACGGCCACACCAACCAGGAGCCGGTGAAGCCAC
GGTTCTTCGCCACTGACTGGGACCTGTCCGCAGCCCGCGCGGTGACCGTGCTGCGCCGGCTCAACGAGCACGGCGACGTG
CCGAAGAAGCGCCTGTCGCTCTCGGCGTTCGGCAACGAGCGGCCGCTGGTCGACCCGGCCACGCCCGGCTCGCAGGAGAT
CAACAAGCGGGTCGACATCGTCGTCCTCCCGCAAACCAGCTACGAGGCCACCCAGCTGATCGACGACGTGTTGGACGCCC
GACCGGGCGGACAGGGGGCAGAGGGATGA

Upstream 100 bases:

>100_bases
AGGGCGTCGCCGCCGTCCAGGCCGGCTCGAACCCGCGCATCGTCGCGCAGCGGCTGCGCTCGCTGCTCCCGGTCGGCCAA
CGCGAGGCGGAGGCCGCCTG

Downstream 100 bases:

>100_bases
GTGTGACCGCTATCAAGCGCAAGCAGAAGAACGACGACCAGGCCGCAGAGGGCGGTGAGAAGAAGGCGAAGGGGGGCAAG
AAGAAGCTCCTGCTGATCGT

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MTAPPRRRKKPPEEPEHDNHERWLVTYADMLTLLMVLFIVMFAMSQVDEAKYNALKSGLAEGFGAESSIMTGSTSVLEDN
LAETGPDYVSSQAFQAMPADQQQLVRAAVTAEERRRLQAQYAEAAAEAKRLEAVRKQLMKALRAAGLAKDVQATIDDRGL
VVSLVSRHVVFEPDIAQLSARGERVVDTLSRVLRDVPNALRIDGHTNQEPVKPRFFATDWDLSAARAVTVLRRLNEHGDV
PKKRLSLSAFGNERPLVDPATPGSQEINKRVDIVVLPQTSYEATQLIDDVLDARPGGQGAEG

Sequences:

>Translated_302_residues
MTAPPRRRKKPPEEPEHDNHERWLVTYADMLTLLMVLFIVMFAMSQVDEAKYNALKSGLAEGFGAESSIMTGSTSVLEDN
LAETGPDYVSSQAFQAMPADQQQLVRAAVTAEERRRLQAQYAEAAAEAKRLEAVRKQLMKALRAAGLAKDVQATIDDRGL
VVSLVSRHVVFEPDIAQLSARGERVVDTLSRVLRDVPNALRIDGHTNQEPVKPRFFATDWDLSAARAVTVLRRLNEHGDV
PKKRLSLSAFGNERPLVDPATPGSQEINKRVDIVVLPQTSYEATQLIDDVLDARPGGQGAEG
>Mature_301_residues
TAPPRRRKKPPEEPEHDNHERWLVTYADMLTLLMVLFIVMFAMSQVDEAKYNALKSGLAEGFGAESSIMTGSTSVLEDNL
AETGPDYVSSQAFQAMPADQQQLVRAAVTAEERRRLQAQYAEAAAEAKRLEAVRKQLMKALRAAGLAKDVQATIDDRGLV
VSLVSRHVVFEPDIAQLSARGERVVDTLSRVLRDVPNALRIDGHTNQEPVKPRFFATDWDLSAARAVTVLRRLNEHGDVP
KKRLSLSAFGNERPLVDPATPGSQEINKRVDIVVLPQTSYEATQLIDDVLDARPGGQGAEG

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 33276; Mature: 33145

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPPRRRKKPPEEPEHDNHERWLVTYADMLTLLMVLFIVMFAMSQVDEAKYNALKSGLA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGFGAESSIMTGSTSVLEDNLAETGPDYVSSQAFQAMPADQQQLVRAAVTAEERRRLQAQ
HCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
YAEAAAEAKRLEAVRKQLMKALRAAGLAKDVQATIDDRGLVVSLVSRHVVFEPDIAQLSA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHH
RGERVVDTLSRVLRDVPNALRIDGHTNQEPVKPRFFATDWDLSAARAVTVLRRLNEHGDV
CHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCC
PKKRLSLSAFGNERPLVDPATPGSQEINKRVDIVVLPQTSYEATQLIDDVLDARPGGQGA
CHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCC
EG
CC
>Mature Secondary Structure 
TAPPRRRKKPPEEPEHDNHERWLVTYADMLTLLMVLFIVMFAMSQVDEAKYNALKSGLA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGFGAESSIMTGSTSVLEDNLAETGPDYVSSQAFQAMPADQQQLVRAAVTAEERRRLQAQ
HCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
YAEAAAEAKRLEAVRKQLMKALRAAGLAKDVQATIDDRGLVVSLVSRHVVFEPDIAQLSA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHH
RGERVVDTLSRVLRDVPNALRIDGHTNQEPVKPRFFATDWDLSAARAVTVLRRLNEHGDV
CHHHHHHHHHHHHHHCCHHEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCC
PKKRLSLSAFGNERPLVDPATPGSQEINKRVDIVVLPQTSYEATQLIDDVLDARPGGQGA
CHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCC
EG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]