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The map label for this gene is fliR [H]

Identifier: 119714988

GI number: 119714988

Start: 791079

End: 791840

Strand: Reverse

Name: fliR [H]

Synonym: Noca_0741

Alternate gene names: 119714988

Gene position: 791840-791079 (Counterclockwise)

Preceding gene: 119714989

Following gene: 119714987

Centisome position: 15.88

GC content: 69.16

Gene sequence:

>762_bases
ATGACCCTGACCGTGGCGGGTGAGCCGCTCGTGGCCTACCTGCTCGCCTCGGTCCGCATCGTCTCCTGGCTCGCCGTGGT
CCCGCCGTTCTCGGGACGGGCGGTGCCGATGATGGCGAAGGTCGTGCTGGGTCTCGGGCTCGCCTTCGCCGCGGTCCCCG
ACGGCGGCTCGATCCCGCTCTCGACGGTGGGCCTGCTCCTCAACGTCGGCACCCAGGTGCTCATCGGGCTCGCCATGGGC
TTCGTCACCCAGCTGCTGTTCGGCGCGATCGCCGCGGCCGGCAGCCTGATCGACGTCTTCGGCGGCTTCTCGCTCGCGTC
CGGCTTCGACCCGCTGTCGATGAACGCCAACACGGTCTTCGGCAAGTTCCACCAGATGCTGGCCACGGTGCTGCTGTTCG
CCAGCGGTGGCCACCTCCTGGTGATCGGCGGGCTGCTGCGCACCTTCCACTTCCTCCCGCTCGGCACCTCCCCGGAGTGG
CAGACCGCGCCGGACGTCCTGCTCACCGCCTTCGGGATGTTCTTCACGACCGCGGTCCAGATCGCGCTGCCGATGATCGC
GGTGCTGTTCCTCTCCGACCTCGGGCTGGCACTGCTGACGAAGGTCGCCCCCCAGCTGAACGCCTTCAACGTGATGTTCC
CCGTCAAGGTCGGCATGACCCTGCTGCTGGTCGGCCTATGGTTCCCCGTCCTCCCGCAGGCCGTGGACCGGCTCGTCGAC
CTCAGCACCCAGGCGATGTCCTCGCTCGCAGGAGCGGGGTGA

Upstream 100 bases:

>100_bases
TCGCCCTGCTGCTCTCCGGCAACTGGATGATGCACACCCTCGTGTCGTTCACCAACGACCTGTTCGCGGGGATCCCCGCG
CTGCTCGGCTGAGCCGACCC

Downstream 100 bases:

>100_bases
TCGGCCGATGACCGGTGAGAAGTCGGAGAAGCCGACCGCCAAGCGCAACAAGGAGAACCGCAAGGAGGGTCAGGTCCCAC
GGAGCCCGGAGATCGGGGCC

Product: flagellar biosynthetic protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTLTVAGEPLVAYLLASVRIVSWLAVVPPFSGRAVPMMAKVVLGLGLAFAAVPDGGSIPLSTVGLLLNVGTQVLIGLAMG
FVTQLLFGAIAAAGSLIDVFGGFSLASGFDPLSMNANTVFGKFHQMLATVLLFASGGHLLVIGGLLRTFHFLPLGTSPEW
QTAPDVLLTAFGMFFTTAVQIALPMIAVLFLSDLGLALLTKVAPQLNAFNVMFPVKVGMTLLLVGLWFPVLPQAVDRLVD
LSTQAMSSLAGAG

Sequences:

>Translated_253_residues
MTLTVAGEPLVAYLLASVRIVSWLAVVPPFSGRAVPMMAKVVLGLGLAFAAVPDGGSIPLSTVGLLLNVGTQVLIGLAMG
FVTQLLFGAIAAAGSLIDVFGGFSLASGFDPLSMNANTVFGKFHQMLATVLLFASGGHLLVIGGLLRTFHFLPLGTSPEW
QTAPDVLLTAFGMFFTTAVQIALPMIAVLFLSDLGLALLTKVAPQLNAFNVMFPVKVGMTLLLVGLWFPVLPQAVDRLVD
LSTQAMSSLAGAG
>Mature_252_residues
TLTVAGEPLVAYLLASVRIVSWLAVVPPFSGRAVPMMAKVVLGLGLAFAAVPDGGSIPLSTVGLLLNVGTQVLIGLAMGF
VTQLLFGAIAAAGSLIDVFGGFSLASGFDPLSMNANTVFGKFHQMLATVLLFASGGHLLVIGGLLRTFHFLPLGTSPEWQ
TAPDVLLTAFGMFFTTAVQIALPMIAVLFLSDLGLALLTKVAPQLNAFNVMFPVKVGMTLLLVGLWFPVLPQAVDRLVDL
STQAMSSLAGAG

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

Organism=Escherichia coli, GI1788261, Length=214, Percent_Identity=34.1121495327103, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 26227; Mature: 26096

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTVAGEPLVAYLLASVRIVSWLAVVPPFSGRAVPMMAKVVLGLGLAFAAVPDGGSIPL
CEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHH
STVGLLLNVGTQVLIGLAMGFVTQLLFGAIAAAGSLIDVFGGFSLASGFDPLSMNANTVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHH
GKFHQMLATVLLFASGGHLLVIGGLLRTFHFLPLGTSPEWQTAPDVLLTAFGMFFTTAVQ
HHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
IALPMIAVLFLSDLGLALLTKVAPQLNAFNVMFPVKVGMTLLLVGLWFPVLPQAVDRLVD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSTQAMSSLAGAG
HHHHHHHHHCCCC
>Mature Secondary Structure 
TLTVAGEPLVAYLLASVRIVSWLAVVPPFSGRAVPMMAKVVLGLGLAFAAVPDGGSIPL
EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHH
STVGLLLNVGTQVLIGLAMGFVTQLLFGAIAAAGSLIDVFGGFSLASGFDPLSMNANTVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHH
GKFHQMLATVLLFASGGHLLVIGGLLRTFHFLPLGTSPEWQTAPDVLLTAFGMFFTTAVQ
HHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
IALPMIAVLFLSDLGLALLTKVAPQLNAFNVMFPVKVGMTLLLVGLWFPVLPQAVDRLVD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSTQAMSSLAGAG
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8299954; 9384377 [H]