| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714903
Identifier: 119714903
GI number: 119714903
Start: 694654
End: 695829
Strand: Reverse
Name: 119714903
Synonym: Noca_0655
Alternate gene names: NA
Gene position: 695829-694654 (Counterclockwise)
Preceding gene: 119714904
Following gene: 119714901
Centisome position: 13.96
GC content: 73.89
Gene sequence:
>1176_bases GTGAGGACCTGGGTCCCCGGCGCGGCCGGCTCCGGGTTCGACGTCGACCACCTGCCGTACGGCGTGTTCTCCCGCGCCGG GGAGGAGCCGCGGGTCGGCGTCCGCATCGGCGACCAGGTGCTCGACCTGGCACCGGTCGCCGCCGCCGAGATGCTCGACG TCCACCGCGTCCTCGAGGAGCGCTCGCTGAACGCGCTGATGGCGGAAGGGCGCCGGGTCCGCGAGTCGGTGCGCGCCTGG GTCACCGGGCTGCTCAGCGACGAGGCCGAGCGCGACCTGGTCGAGCCGCACCTGGTCCCGCTCGCAGAGGTCGCCCTGCA CCTGCCGGTCGAGGTGGCCGACTACGTCGACTTCTACGCGAGCGAGCACCACGCCTCCAACGTCGGCCGGATCTTCCGCC CCGACGCCGAGCCCTTGCTGCCGAACTGGAAGCACCTGCCGGTCGGCTACCACGGTCGCGCCGGCACGGTGGTCGCGTCC GGCACCCCCGTCGTCCGCCCGTGCGGGCAGCGGCGCGGCGACGCAGGCCCGACGTACGGCCCCTCGACACGGCTCGACAT CGAGGCCGAGCTCGGCTTCGTGGTCGGCACGCCGTCCGAGCTCGGGACTCCGGTGCGGTACGACGCGTTCGCCGACCACG TGTTCGGCGTGGTCGGCCTCAACGACTGGTCGGCGCGCGACATCCAGGCCTGGGAGTACGTACCCCTGGGGCCGTTCCTC GGCAAGTCCTTCGCGACCTCGGTGTCCCAGTGGGTGACGCCGCTCGAGGCGCTCGACGCGGCGTGGGTCGACCTGCCCGG CCAGGACCCGGAGCCGTTGCCCTACCTGGGCCCCGGCGCCACCCGGGGGCTCGACATCGACGTCGAGGTGGTCGTCAACG GCGAGGTCGTCAGCCGGCCGCCCTACCGCACGATGTACTGGTCGCCGGCGCAGCTGCTCGCCCATCTCACGGTGAACGGA GCGAGCCTGCGCACCGGCGACCTCTACGCGTCGGGCACCATCAGCGGCCCGGAGCCGGACCAGCGCGGCTCACTGCTGGA GCTGGGCTGGGGCGCCGACGACGCGTTCCTCGACGACGGCGACGAGGTCGTGCTCCGCTACGCCGCACCCGGCACGTCCG GCGGCCGGATCACGCTCGGTGAGGTGGCCGGGGTCATCGCGCCCGCACGCACCTGA
Upstream 100 bases:
>100_bases TCGACCTCGCGGGTGCCCGGCGCTGGTTCACCTCCTTCGGGTCGTGCTCGATCGACGAGCCGTTCGAGGACCTGGTCGCG CTCGGCCTGCTGGAGCTCTC
Downstream 100 bases:
>100_bases GCGGGCTCCGGCTCCACCGCCACCCCCGCGACCGACCCCGCAGCGGGGATCCACTCCGCCGACACGATCCGCTCGATCCG GGCTCGTGAGCGGCGGGTCA
Product: fumarylacetoacetate hydrolase
Products: acetoacetate; fumarate
Alternate protein names: Fumarylacetoacetate Hydrolase; Fumarylacetoacetase Hydrolase; Hydroxylase; LOW QUALITY PROTEIN Fumarylacetoacetase
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MRTWVPGAAGSGFDVDHLPYGVFSRAGEEPRVGVRIGDQVLDLAPVAAAEMLDVHRVLEERSLNALMAEGRRVRESVRAW VTGLLSDEAERDLVEPHLVPLAEVALHLPVEVADYVDFYASEHHASNVGRIFRPDAEPLLPNWKHLPVGYHGRAGTVVAS GTPVVRPCGQRRGDAGPTYGPSTRLDIEAELGFVVGTPSELGTPVRYDAFADHVFGVVGLNDWSARDIQAWEYVPLGPFL GKSFATSVSQWVTPLEALDAAWVDLPGQDPEPLPYLGPGATRGLDIDVEVVVNGEVVSRPPYRTMYWSPAQLLAHLTVNG ASLRTGDLYASGTISGPEPDQRGSLLELGWGADDAFLDDGDEVVLRYAAPGTSGGRITLGEVAGVIAPART
Sequences:
>Translated_391_residues MRTWVPGAAGSGFDVDHLPYGVFSRAGEEPRVGVRIGDQVLDLAPVAAAEMLDVHRVLEERSLNALMAEGRRVRESVRAW VTGLLSDEAERDLVEPHLVPLAEVALHLPVEVADYVDFYASEHHASNVGRIFRPDAEPLLPNWKHLPVGYHGRAGTVVAS GTPVVRPCGQRRGDAGPTYGPSTRLDIEAELGFVVGTPSELGTPVRYDAFADHVFGVVGLNDWSARDIQAWEYVPLGPFL GKSFATSVSQWVTPLEALDAAWVDLPGQDPEPLPYLGPGATRGLDIDVEVVVNGEVVSRPPYRTMYWSPAQLLAHLTVNG ASLRTGDLYASGTISGPEPDQRGSLLELGWGADDAFLDDGDEVVLRYAAPGTSGGRITLGEVAGVIAPART >Mature_391_residues MRTWVPGAAGSGFDVDHLPYGVFSRAGEEPRVGVRIGDQVLDLAPVAAAEMLDVHRVLEERSLNALMAEGRRVRESVRAW VTGLLSDEAERDLVEPHLVPLAEVALHLPVEVADYVDFYASEHHASNVGRIFRPDAEPLLPNWKHLPVGYHGRAGTVVAS GTPVVRPCGQRRGDAGPTYGPSTRLDIEAELGFVVGTPSELGTPVRYDAFADHVFGVVGLNDWSARDIQAWEYVPLGPFL GKSFATSVSQWVTPLEALDAAWVDLPGQDPEPLPYLGPGATRGLDIDVEVVVNGEVVSRPPYRTMYWSPAQLLAHLTVNG ASLRTGDLYASGTISGPEPDQRGSLLELGWGADDAFLDDGDEVVLRYAAPGTSGGRITLGEVAGVIAPART
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4557587, Length=415, Percent_Identity=45.3012048192771, Blast_Score=344, Evalue=8e-95, Organism=Caenorhabditis elegans, GI17568863, Length=417, Percent_Identity=46.7625899280576, Blast_Score=327, Evalue=8e-90, Organism=Drosophila melanogaster, GI24657182, Length=412, Percent_Identity=43.6893203883495, Blast_Score=324, Evalue=7e-89,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.2
Molecular weight: Translated: 41930; Mature: 41930
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTWVPGAAGSGFDVDHLPYGVFSRAGEEPRVGVRIGDQVLDLAPVAAAEMLDVHRVLEE CCCCCCCCCCCCCCHHCCCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH RSLNALMAEGRRVRESVRAWVTGLLSDEAERDLVEPHLVPLAEVALHLPVEVADYVDFYA HHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHH SEHHASNVGRIFRPDAEPLLPNWKHLPVGYHGRAGTVVASGTPVVRPCGQRRGDAGPTYG HHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC PSTRLDIEAELGFVVGTPSELGTPVRYDAFADHVFGVVGLNDWSARDIQAWEYVPLGPFL CCCEEEEEEECEEEEECHHHHCCCEEHHHHHHHHEEEEECCCCCCCCCCCEEEEECCHHH GKSFATSVSQWVTPLEALDAAWVDLPGQDPEPLPYLGPGATRGLDIDVEVVVNGEVVSRP HHHHHHHHHHHHCHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEECCC PYRTMYWSPAQLLAHLTVNGASLRTGDLYASGTISGPEPDQRGSLLELGWGADDAFLDDG CCCEEEECHHHHHHHHEECCCEEECCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCC DEVVLRYAAPGTSGGRITLGEVAGVIAPART CEEEEEEECCCCCCCEEEHHHHHHHHCCCCC >Mature Secondary Structure MRTWVPGAAGSGFDVDHLPYGVFSRAGEEPRVGVRIGDQVLDLAPVAAAEMLDVHRVLEE CCCCCCCCCCCCCCHHCCCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH RSLNALMAEGRRVRESVRAWVTGLLSDEAERDLVEPHLVPLAEVALHLPVEVADYVDFYA HHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHH SEHHASNVGRIFRPDAEPLLPNWKHLPVGYHGRAGTVVASGTPVVRPCGQRRGDAGPTYG HHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC PSTRLDIEAELGFVVGTPSELGTPVRYDAFADHVFGVVGLNDWSARDIQAWEYVPLGPFL CCCEEEEEEECEEEEECHHHHCCCEEHHHHHHHHEEEEECCCCCCCCCCCEEEEECCHHH GKSFATSVSQWVTPLEALDAAWVDLPGQDPEPLPYLGPGATRGLDIDVEVVVNGEVVSRP HHHHHHHHHHHHCHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEECCC PYRTMYWSPAQLLAHLTVNGASLRTGDLYASGTISGPEPDQRGSLLELGWGADDAFLDDG CCCEEEECHHHHHHHHEECCCEEECCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCC DEVVLRYAAPGTSGGRITLGEVAGVIAPART CEEEEEEECCCCCCCEEEHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-fumarylacetoacetate; H2O
Specific reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA