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The map label for this gene is xerC [C]

Identifier: 119714859

GI number: 119714859

Start: 636373

End: 637611

Strand: Reverse

Name: xerC [C]

Synonym: Noca_0602

Alternate gene names: 119714859

Gene position: 637611-636373 (Counterclockwise)

Preceding gene: 119714861

Following gene: 119714858

Centisome position: 12.79

GC content: 68.12

Gene sequence:

>1239_bases
GTGACGAAGAGATCGGCGACGGCCCGGCCGTATCCGGTTCGGATCCAGCGGGTGCCGGTGGGCCCGCTGGCACCGACTGT
GTTGGACGAATGTCGGCGGTGGTTCGCGGCGAAGGGGTACTCGCCGGGCTCAGCGGCCGCAGCCGTGAATCTGGCCCAGC
GGCTGAGCGCCTGGATGGAGTTGGCTGGCGCTGGCATCGATGAGATCGACGAGGACCTGCTCGATCGGTTCGTGACAGCG
GAGCGTTCCCGCGAACGGCCGTGCTCCTCGGTGAAGCCCTGGATCGGTGCGCTCCGCCGATGCCTGACAGATTCCGGCTA
CTTGCAGGCAGACGGAGTCGACGAGGACCGGTCCACACCGACACAGGTTGCGGCGGCGCAATGGTGCGAGTGGATGCGGG
TCCAGCGCGGGCTGACCGAGAAGTCCATCGTTCGGTATCGCTACTACGCAGTCGGTCTTCTGGACCAGGTGACGACGGCC
GACGGGTCGGTGAGCTGGGACCGGCTCAACGCGACGATGATCAACGCGTACGTGGCTGACCGTGGCCGTGGCTACGGTGT
TGCCGCCAAGGCTCACGTGGTGGGCTCGGTCCGTTGCCTGCTGCGGTGGGCGCTGAGCACCGGTCGCTTGGACCGGGACC
TGAGCGCCGGGATCCTCAAACCGTCCGGGACCAAACGATCCCTCCCGCGGGGAGTGACCGCCGACCAGGTCGCGGCATTA
CTCGCCGTCTGCGACCCGACCACGGCGATCGGGGCACGAGACCGTGCACTGGTGTTGATGCTGGTCCGGCTCGGCCTGCG
GGCCGGTGAGGCCGCCCATCTGATGCTCGATGACATCGACTGGGCAGGCGGCCAGGTGAGAGTCACCGGCAAGGGCCGCG
AGCACGTGCTACCCCTACCCGTCGACGTGGGGCAGGCATTGGAAGCCTGGCTGCGACTTCGACCTGAGGCGCTGGATCGC
GCCGTGTTCGTGCGCCTGCGGGCACCACGCCAGATGATGACGGCCTCGGGAACCTCAGGGGTCATCGCCCGCCTGTCGAG
CATGGCCGGCATCGAGCCGATCCACGCACACCGGCTCCGCCACACCGCCGCGATGGACGTCCTGGCCGCGGGCGGCACGC
TGAGCGAAGCCAAGGAACTGCTGGGCCACGTCTACACCGTCACCACGATGACCTACGCCAAGGTCGACCTTGCCTCGCTA
CGCGAGCTGGTCGTCCCGTTCGGACAGGTACCGCGATGA

Upstream 100 bases:

>100_bases
GGTCGTGCAGGTCAGTGACGTGGAGTGGCTATGGAAGGTCGGCATAGTCCCGGCGTCGTGATCACGCTTCAGACACACGA
AGTGTCTGGAGGTGAGGTTC

Downstream 100 bases:

>100_bases
CCGCCCCCGCGAAGACGCCGGCGGCGTCGGCGCCGACACCGACGTTGCGTGATCGGCTCGATGAGTACCTGGTGATGCGC
CGGGCGTTGGGGTTCCAGCT

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MTKRSATARPYPVRIQRVPVGPLAPTVLDECRRWFAAKGYSPGSAAAAVNLAQRLSAWMELAGAGIDEIDEDLLDRFVTA
ERSRERPCSSVKPWIGALRRCLTDSGYLQADGVDEDRSTPTQVAAAQWCEWMRVQRGLTEKSIVRYRYYAVGLLDQVTTA
DGSVSWDRLNATMINAYVADRGRGYGVAAKAHVVGSVRCLLRWALSTGRLDRDLSAGILKPSGTKRSLPRGVTADQVAAL
LAVCDPTTAIGARDRALVLMLVRLGLRAGEAAHLMLDDIDWAGGQVRVTGKGREHVLPLPVDVGQALEAWLRLRPEALDR
AVFVRLRAPRQMMTASGTSGVIARLSSMAGIEPIHAHRLRHTAAMDVLAAGGTLSEAKELLGHVYTVTTMTYAKVDLASL
RELVVPFGQVPR

Sequences:

>Translated_412_residues
MTKRSATARPYPVRIQRVPVGPLAPTVLDECRRWFAAKGYSPGSAAAAVNLAQRLSAWMELAGAGIDEIDEDLLDRFVTA
ERSRERPCSSVKPWIGALRRCLTDSGYLQADGVDEDRSTPTQVAAAQWCEWMRVQRGLTEKSIVRYRYYAVGLLDQVTTA
DGSVSWDRLNATMINAYVADRGRGYGVAAKAHVVGSVRCLLRWALSTGRLDRDLSAGILKPSGTKRSLPRGVTADQVAAL
LAVCDPTTAIGARDRALVLMLVRLGLRAGEAAHLMLDDIDWAGGQVRVTGKGREHVLPLPVDVGQALEAWLRLRPEALDR
AVFVRLRAPRQMMTASGTSGVIARLSSMAGIEPIHAHRLRHTAAMDVLAAGGTLSEAKELLGHVYTVTTMTYAKVDLASL
RELVVPFGQVPR
>Mature_411_residues
TKRSATARPYPVRIQRVPVGPLAPTVLDECRRWFAAKGYSPGSAAAAVNLAQRLSAWMELAGAGIDEIDEDLLDRFVTAE
RSRERPCSSVKPWIGALRRCLTDSGYLQADGVDEDRSTPTQVAAAQWCEWMRVQRGLTEKSIVRYRYYAVGLLDQVTTAD
GSVSWDRLNATMINAYVADRGRGYGVAAKAHVVGSVRCLLRWALSTGRLDRDLSAGILKPSGTKRSLPRGVTADQVAALL
AVCDPTTAIGARDRALVLMLVRLGLRAGEAAHLMLDDIDWAGGQVRVTGKGREHVLPLPVDVGQALEAWLRLRPEALDRA
VFVRLRAPRQMMTASGTSGVIARLSSMAGIEPIHAHRLRHTAAMDVLAAGGTLSEAKELLGHVYTVTTMTYAKVDLASLR
ELVVPFGQVPR

Specific function: Site-Specific Tyrosine Recombinase, Which Acts By Catalyzing The Cutting And Rejoining Of The Recombining DNA Molecules. Binds Cooperatively To Specific DNA Consensus Sequences That Are Separated From Xerd Binding Sites By A Short Central Region, Forming

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1790244, Length=287, Percent_Identity=27.8745644599303, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1789261, Length=239, Percent_Identity=32.2175732217573, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 44768; Mature: 44637

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRSATARPYPVRIQRVPVGPLAPTVLDECRRWFAAKGYSPGSAAAAVNLAQRLSAWME
CCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LAGAGIDEIDEDLLDRFVTAERSRERPCSSVKPWIGALRRCLTDSGYLQADGVDEDRSTP
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCH
TQVAAAQWCEWMRVQRGLTEKSIVRYRYYAVGLLDQVTTADGSVSWDRLNATMINAYVAD
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
RGRGYGVAAKAHVVGSVRCLLRWALSTGRLDRDLSAGILKPSGTKRSLPRGVTADQVAAL
CCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LAVCDPTTAIGARDRALVLMLVRLGLRAGEAAHLMLDDIDWAGGQVRVTGKGREHVLPLP
HHHCCCCHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEECCCCCCEECCC
VDVGQALEAWLRLRPEALDRAVFVRLRAPRQMMTASGTSGVIARLSSMAGIEPIHAHRLR
CCHHHHHHHHHHCCHHHHHHHHHEEECCCHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH
HTAAMDVLAAGGTLSEAKELLGHVYTVTTMTYAKVDLASLRELVVPFGQVPR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TKRSATARPYPVRIQRVPVGPLAPTVLDECRRWFAAKGYSPGSAAAAVNLAQRLSAWME
CCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LAGAGIDEIDEDLLDRFVTAERSRERPCSSVKPWIGALRRCLTDSGYLQADGVDEDRSTP
HHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCH
TQVAAAQWCEWMRVQRGLTEKSIVRYRYYAVGLLDQVTTADGSVSWDRLNATMINAYVAD
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
RGRGYGVAAKAHVVGSVRCLLRWALSTGRLDRDLSAGILKPSGTKRSLPRGVTADQVAAL
CCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
LAVCDPTTAIGARDRALVLMLVRLGLRAGEAAHLMLDDIDWAGGQVRVTGKGREHVLPLP
HHHCCCCHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEECCCCCCEECCC
VDVGQALEAWLRLRPEALDRAVFVRLRAPRQMMTASGTSGVIARLSSMAGIEPIHAHRLR
CCHHHHHHHHHHCCHHHHHHHHHEEECCCHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH
HTAAMDVLAAGGTLSEAKELLGHVYTVTTMTYAKVDLASLRELVVPFGQVPR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]