| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386547
Identifier: 119386547
GI number: 119386547
Start: 974059
End: 975390
Strand: Direct
Name: 119386547
Synonym: Pden_3840
Alternate gene names: NA
Gene position: 974059-975390 (Clockwise)
Preceding gene: 119386546
Following gene: 119386548
Centisome position: 56.3
GC content: 56.68
Gene sequence:
>1332_bases GTGACCTACAAAATCAATCTGACACCCCGAGCAGAGCGCGAGGCTATGATCGCCAAGAGGCGAGAGGCGTCGGATGAATT CGGCGAAACTATTTTTGATTTTCGCAGCGACAAATTCACGCCCAAGGTGATTTCCTTGCCCATCGACGTTCCCGTGTACC GCATGGAAAACTGCCGCACGTTCAGCGCGCAGCAGACGGAGATCGCCCGTGAAGGCCTGGCCAAGGACTTCTTCGAGAAG GGTCAGGAGCTGACCACCGCTCAGCAGGCGCAGCACGAAATCCTGGCGCGGCTCGCCAAGCAGGGCACCGACTCTGTTAC CCCAATCATCTCGGTTCTGGAAAAGGACGGCCAACGCGAGACGATCCTCATCACCAGCACAGGTGTTGTCGTTAACGGCA ACCGACGACTTGCCGCGATGCGCGAGCTCATGAAGCGTAAGGATGGATCGCTTGATGATCGCTTCACCAACATCAAGTGT GCCGTTTTACCGCCAGACGTTACGCGAGACGAAATCGACGATATCGAAGCCGATCTGCAAGCGCGGCCTCAAACGAAGCT CGACTATGACTGGATCGGCGATGCAAGGCTGATCCGCCGCCAGGTCGGGAAGAACAGATCCACGAAGGAGGTCGCTGACC GCCTTCGCCGCAGCAAGACCGACATCGAAAACGTCCTGCAAGCGCTCGATGAAGCAGACTTGTACCTCAGCGAGTGGGTC AAGAAGCCGGGAGAATACGACCTGCTTCAGGACGGGCAGCAGATATTTGGGGATCTCCCCAAAGCTATCGCCAAGAAGGA CGCGAACCTTCAGAACGCAAGCCGCGCGATTGCGTGGTGTCTCTATGAGAACCGCGACAGGATTAGCGGGCGTGTCTACC GCTTTAATGCGGCGTTCGGCAAGCTGGCACCCCAAGTGCTGGAAATTATGGAAGATCAGCTTGAGCTGCCCGCCGACGAT GATGACGATCAGGTCGATGATGATGACTTCGCCATCGATATCGACAGTGACGGCGATAGCAAAGACTACACGCCCATTAT CGAGGTTTTGCGGGACGAAGACACGAGGGACGAAGCGATCACCACTTTGATCGAAGCCTGCGAGACCGCCATTGAGCTGG ACAAAGGTCAGAAGAACGAAGAAGCCGCGCTAAAGGCGCTGGCGCAGGTCAACTCCAAGATCACGGGCATCGACATAAGT TCCGCAGGAACGCCTACTTTGCCAGCCATCCTCAAGCAAATTGGATCGATCCGCAAAGGTCTCGACAAGATCGAGGCCGC GATCCAAGCGCGCCAAGTCGGTCTTGCTGCCGATGATGACGGGGAGGAGTAA
Upstream 100 bases:
>100_bases TCGCCAACGCCGAGCGCGTTATCAAAGAGCTTGAGCTCTTCGACCGTGTAATCACCGTGCCCATCCTCGTGGTCGCGTTC GAGTAAGAAGGGGGACGCCA
Downstream 100 bases:
>100_bases GCCTGCGTGAGCGATACTCCGACAGCCGTAGCCATTCGATATAATCCCGATCACACAGGTACTTTCACAGTGCCTGACGA CGCGCTGGAAACCCCCATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MTYKINLTPRAEREAMIAKRREASDEFGETIFDFRSDKFTPKVISLPIDVPVYRMENCRTFSAQQTEIAREGLAKDFFEK GQELTTAQQAQHEILARLAKQGTDSVTPIISVLEKDGQRETILITSTGVVVNGNRRLAAMRELMKRKDGSLDDRFTNIKC AVLPPDVTRDEIDDIEADLQARPQTKLDYDWIGDARLIRRQVGKNRSTKEVADRLRRSKTDIENVLQALDEADLYLSEWV KKPGEYDLLQDGQQIFGDLPKAIAKKDANLQNASRAIAWCLYENRDRISGRVYRFNAAFGKLAPQVLEIMEDQLELPADD DDDQVDDDDFAIDIDSDGDSKDYTPIIEVLRDEDTRDEAITTLIEACETAIELDKGQKNEEAALKALAQVNSKITGIDIS SAGTPTLPAILKQIGSIRKGLDKIEAAIQARQVGLAADDDGEE
Sequences:
>Translated_443_residues MTYKINLTPRAEREAMIAKRREASDEFGETIFDFRSDKFTPKVISLPIDVPVYRMENCRTFSAQQTEIAREGLAKDFFEK GQELTTAQQAQHEILARLAKQGTDSVTPIISVLEKDGQRETILITSTGVVVNGNRRLAAMRELMKRKDGSLDDRFTNIKC AVLPPDVTRDEIDDIEADLQARPQTKLDYDWIGDARLIRRQVGKNRSTKEVADRLRRSKTDIENVLQALDEADLYLSEWV KKPGEYDLLQDGQQIFGDLPKAIAKKDANLQNASRAIAWCLYENRDRISGRVYRFNAAFGKLAPQVLEIMEDQLELPADD DDDQVDDDDFAIDIDSDGDSKDYTPIIEVLRDEDTRDEAITTLIEACETAIELDKGQKNEEAALKALAQVNSKITGIDIS SAGTPTLPAILKQIGSIRKGLDKIEAAIQARQVGLAADDDGEE >Mature_442_residues TYKINLTPRAEREAMIAKRREASDEFGETIFDFRSDKFTPKVISLPIDVPVYRMENCRTFSAQQTEIAREGLAKDFFEKG QELTTAQQAQHEILARLAKQGTDSVTPIISVLEKDGQRETILITSTGVVVNGNRRLAAMRELMKRKDGSLDDRFTNIKCA VLPPDVTRDEIDDIEADLQARPQTKLDYDWIGDARLIRRQVGKNRSTKEVADRLRRSKTDIENVLQALDEADLYLSEWVK KPGEYDLLQDGQQIFGDLPKAIAKKDANLQNASRAIAWCLYENRDRISGRVYRFNAAFGKLAPQVLEIMEDQLELPADDD DDQVDDDDFAIDIDSDGDSKDYTPIIEVLRDEDTRDEAITTLIEACETAIELDKGQKNEEAALKALAQVNSKITGIDISS AGTPTLPAILKQIGSIRKGLDKIEAAIQARQVGLAADDDGEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49653; Mature: 49522
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYKINLTPRAEREAMIAKRREASDEFGETIFDFRSDKFTPKVISLPIDVPVYRMENCRT CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHCCCCC FSAQQTEIAREGLAKDFFEKGQELTTAQQAQHEILARLAKQGTDSVTPIISVLEKDGQRE CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC TILITSTGVVVNGNRRLAAMRELMKRKDGSLDDRFTNIKCAVLPPDVTRDEIDDIEADLQ EEEEEECCEEEECCCHHHHHHHHHHHCCCCCCCHHCCEEEEEECCCCCHHHHHHHHHHHH ARPQTKLDYDWIGDARLIRRQVGKNRSTKEVADRLRRSKTDIENVLQALDEADLYLSEWV CCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKPGEYDLLQDGQQIFGDLPKAIAKKDANLQNASRAIAWCLYENRDRISGRVYRFNAAFG CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECHHH KLAPQVLEIMEDQLELPADDDDDQVDDDDFAIDIDSDGDSKDYTPIIEVLRDEDTRDEAI HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCHHHHH TTLIEACETAIELDKGQKNEEAALKALAQVNSKITGIDISSAGTPTLPAILKQIGSIRKG HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHH LDKIEAAIQARQVGLAADDDGEE HHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TYKINLTPRAEREAMIAKRREASDEFGETIFDFRSDKFTPKVISLPIDVPVYRMENCRT EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHCCCCC FSAQQTEIAREGLAKDFFEKGQELTTAQQAQHEILARLAKQGTDSVTPIISVLEKDGQRE CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC TILITSTGVVVNGNRRLAAMRELMKRKDGSLDDRFTNIKCAVLPPDVTRDEIDDIEADLQ EEEEEECCEEEECCCHHHHHHHHHHHCCCCCCCHHCCEEEEEECCCCCHHHHHHHHHHHH ARPQTKLDYDWIGDARLIRRQVGKNRSTKEVADRLRRSKTDIENVLQALDEADLYLSEWV CCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKPGEYDLLQDGQQIFGDLPKAIAKKDANLQNASRAIAWCLYENRDRISGRVYRFNAAFG CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECHHH KLAPQVLEIMEDQLELPADDDDDQVDDDDFAIDIDSDGDSKDYTPIIEVLRDEDTRDEAI HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCHHHHH TTLIEACETAIELDKGQKNEEAALKALAQVNSKITGIDISSAGTPTLPAILKQIGSIRKG HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHH LDKIEAAIQARQVGLAADDDGEE HHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA