| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386459
Identifier: 119386459
GI number: 119386459
Start: 888087
End: 888629
Strand: Direct
Name: 119386459
Synonym: Pden_3751
Alternate gene names: NA
Gene position: 888087-888629 (Clockwise)
Preceding gene: 119386458
Following gene: 119386460
Centisome position: 51.33
GC content: 67.96
Gene sequence:
>543_bases ATGAGCAAGCGAACCCCCGGACTTCCCCAGCGCCCGCGCGGCTTCTGGCCGACCCCTCGCGAGGCGGTGGTGCCTCTGAT CCCGCATCTGCCGCCTCGGGCGCGCTATGGCGAGCCCTGCGCAGGCGATGGGGCGCTGATCGGGCATCTGCGGGATCTGT GGCCGGCGGGCCGGTGCGTCTGGGCCTCTGACCTGGAGCCGCAAGGGCCGGGCATTGAAACGATGGCCGTGGCGGATATC GAGGCAGCGGATGACGTTGACCTGTGGATCACGAATGTTCCCTGGCCTGTCACCGGCGGAAAGGGCGACCCGGCGCTATC CATCATCAAGCACCTGATCGGCATCGCGCCGGCCTGGGTGCTGCTCCCCTGGGACTTCGCCGCCAACGGCTATTTCGGCC GTCTGATCGACCAGTGCAGCGACATCGTGCCCATCGGCCGCGTTTCGTGGCTCGGCAACGGCACGCCCGGCAAGGACAAC TGCTGCTGGATGCGCTTCGACGCCCAGAACCGATTCCCGGCAGTGGTGAGGGCCAGAGCATGA
Upstream 100 bases:
>100_bases TGCGCGACCTCGGCGCCATCGTCAGGAAGGGCGAATGGGGGGGGGGCGGCTGGGATAAGCCTGCGGTCCAGCTATCGCGC GAGGCTGGGAATCTGAGCTG
Downstream 100 bases:
>100_bases TCCTCCGCGTGAAACTGCCATGGGCTAAGACCAGCGAGCTTTCCGCGAACAGTCGCTTGCACTGGCGCAAGCGGGCGAAG CTGGTCAAGGCGCAGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSKRTPGLPQRPRGFWPTPREAVVPLIPHLPPRARYGEPCAGDGALIGHLRDLWPAGRCVWASDLEPQGPGIETMAVADI EAADDVDLWITNVPWPVTGGKGDPALSIIKHLIGIAPAWVLLPWDFAANGYFGRLIDQCSDIVPIGRVSWLGNGTPGKDN CCWMRFDAQNRFPAVVRARA
Sequences:
>Translated_180_residues MSKRTPGLPQRPRGFWPTPREAVVPLIPHLPPRARYGEPCAGDGALIGHLRDLWPAGRCVWASDLEPQGPGIETMAVADI EAADDVDLWITNVPWPVTGGKGDPALSIIKHLIGIAPAWVLLPWDFAANGYFGRLIDQCSDIVPIGRVSWLGNGTPGKDN CCWMRFDAQNRFPAVVRARA >Mature_179_residues SKRTPGLPQRPRGFWPTPREAVVPLIPHLPPRARYGEPCAGDGALIGHLRDLWPAGRCVWASDLEPQGPGIETMAVADIE AADDVDLWITNVPWPVTGGKGDPALSIIKHLIGIAPAWVLLPWDFAANGYFGRLIDQCSDIVPIGRVSWLGNGTPGKDNC CWMRFDAQNRFPAVVRARA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19649; Mature: 19518
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRTPGLPQRPRGFWPTPREAVVPLIPHLPPRARYGEPCAGDGALIGHLRDLWPAGRCV CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEE WASDLEPQGPGIETMAVADIEAADDVDLWITNVPWPVTGGKGDPALSIIKHLIGIAPAWV EECCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEE LLPWDFAANGYFGRLIDQCSDIVPIGRVSWLGNGTPGKDNCCWMRFDAQNRFPAVVRARA EEECCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCEEEECC >Mature Secondary Structure SKRTPGLPQRPRGFWPTPREAVVPLIPHLPPRARYGEPCAGDGALIGHLRDLWPAGRCV CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEE WASDLEPQGPGIETMAVADIEAADDVDLWITNVPWPVTGGKGDPALSIIKHLIGIAPAWV EECCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEE LLPWDFAANGYFGRLIDQCSDIVPIGRVSWLGNGTPGKDNCCWMRFDAQNRFPAVVRARA EEECCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA