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The map label for this gene is ribF [H]

Identifier: 119386370

GI number: 119386370

Start: 812015

End: 812944

Strand: Direct

Name: ribF [H]

Synonym: Pden_3662

Alternate gene names: 119386370

Gene position: 812015-812944 (Clockwise)

Preceding gene: 119386369

Following gene: 119386371

Centisome position: 46.93

GC content: 68.82

Gene sequence:

>930_bases
TTGCGCATCCATCACGACTGGAAAGCTCTGCCGCTCGATGCCCGCGGGGCCACCGTCGCCATGGGCAATTTCGACGGCAT
CCATCTTGGCCATCGTTCGGTGATCGACGCGGCGCGCGCCGCCTGCGACGCGCCCCTGGGCGTCATCACCTTCGAGCCGC
ATCCGCGCGAATTCTTCGCACCCGACGCGCCCCCCTTCCGGCTGATGAACGTGGAGTCGCGGGCGAACCGGCTGGCCCGG
CTAGGGGTGGATCATCTTTACGAACTGCCCTTCGACGCCGTGCTGGCGGGGCTTGCGCCCGAATCCTTTGCGCGCGAGGT
GCTGGTCGAGGGCCTGGGCGTGCGCCATGTCACCGTGGGCACCGATTTCTGCTTTGGTCGCAAGCGTTCGGGCGATGCGC
AGACGCTGGCCCGGCTGGGGCGCGAGATGGGCTTCGGCGTCACCGTCGCGCCGCTCATCGGCGACGGCGCGGTGCAATAC
AGCTCGACCGCCATCCGCAAGGCGCTGGCCGAGGGCCGCACCCGCGATGCCGAGCGGATGCTGGGCCATTGGCACCGCAT
CGACGGCGAGGTGCTGCATGGCGACAAGCGCGGCCGCGACCTGGGCTATCCGACCGCGAACATGGGGGTGGACGGGTTGC
ACCTGCCGGCGCTTGGCATCTATGCCGTGCTGGTCGACGTGCTGACCGGGCCGGACCGCGGCAGCTACAAGGGCGTGGCC
AGCCTTGGCGTGCGCCCGATGTTCGGCGAGAACCGGCCCAACCTGGAAGTGCATATCTTCGATTTCGCGGCCGATCTTTA
CGGCCAGCACCTGTCGGTCGCGCTGGTCGAATACCTGCGCCCCGAGGCGAAGTTCGACAGCCTCGAGGCACTCGTCTCGC
AGATGGACCGCGACAGTGCCCGGGCGCGCGAGATCCTGGCGACCCGCTGA

Upstream 100 bases:

>100_bases
TCGTCGGCGATACGGTCGTCCTGAAAGGTGAGGCCGTCGTTCTGGCGCCAAGCCGTAAATTCGACTGACAGGGCCGGCCT
TCGGCCCATCGGGGGCCCGA

Downstream 100 bases:

>100_bases
TGCGCGAGCGATTCTGGGAACTGCCGCTGGCACGGCTCGACAAGGAGGAATGGGAGGCGCTTTGCGACGGCTGCGGCAAA
TGTTGCCTCAACAAAATCGA

Product: riboflavin biosynthesis protein RibF

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MRIHHDWKALPLDARGATVAMGNFDGIHLGHRSVIDAARAACDAPLGVITFEPHPREFFAPDAPPFRLMNVESRANRLAR
LGVDHLYELPFDAVLAGLAPESFAREVLVEGLGVRHVTVGTDFCFGRKRSGDAQTLARLGREMGFGVTVAPLIGDGAVQY
SSTAIRKALAEGRTRDAERMLGHWHRIDGEVLHGDKRGRDLGYPTANMGVDGLHLPALGIYAVLVDVLTGPDRGSYKGVA
SLGVRPMFGENRPNLEVHIFDFAADLYGQHLSVALVEYLRPEAKFDSLEALVSQMDRDSARAREILATR

Sequences:

>Translated_309_residues
MRIHHDWKALPLDARGATVAMGNFDGIHLGHRSVIDAARAACDAPLGVITFEPHPREFFAPDAPPFRLMNVESRANRLAR
LGVDHLYELPFDAVLAGLAPESFAREVLVEGLGVRHVTVGTDFCFGRKRSGDAQTLARLGREMGFGVTVAPLIGDGAVQY
SSTAIRKALAEGRTRDAERMLGHWHRIDGEVLHGDKRGRDLGYPTANMGVDGLHLPALGIYAVLVDVLTGPDRGSYKGVA
SLGVRPMFGENRPNLEVHIFDFAADLYGQHLSVALVEYLRPEAKFDSLEALVSQMDRDSARAREILATR
>Mature_309_residues
MRIHHDWKALPLDARGATVAMGNFDGIHLGHRSVIDAARAACDAPLGVITFEPHPREFFAPDAPPFRLMNVESRANRLAR
LGVDHLYELPFDAVLAGLAPESFAREVLVEGLGVRHVTVGTDFCFGRKRSGDAQTLARLGREMGFGVTVAPLIGDGAVQY
SSTAIRKALAEGRTRDAERMLGHWHRIDGEVLHGDKRGRDLGYPTANMGVDGLHLPALGIYAVLVDVLTGPDRGSYKGVA
SLGVRPMFGENRPNLEVHIFDFAADLYGQHLSVALVEYLRPEAKFDSLEALVSQMDRDSARAREILATR

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Homo sapiens, GI269973877, Length=124, Percent_Identity=40.3225806451613, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1786208, Length=305, Percent_Identity=39.672131147541, Blast_Score=210, Evalue=1e-55,
Organism=Drosophila melanogaster, GI24644927, Length=125, Percent_Identity=38.4, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 33750; Mature: 33750

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIHHDWKALPLDARGATVAMGNFDGIHLGHRSVIDAARAACDAPLGVITFEPHPREFFA
CCCCCCCCCCCCCCCCCEEEECCCCCEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
PDAPPFRLMNVESRANRLARLGVDHLYELPFDAVLAGLAPESFAREVLVEGLGVRHVTVG
CCCCCEEEEECHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCEEEEEEC
TDFCFGRKRSGDAQTLARLGREMGFGVTVAPLIGDGAVQYSSTAIRKALAEGRTRDAERM
CCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHH
LGHWHRIDGEVLHGDKRGRDLGYPTANMGVDGLHLPALGIYAVLVDVLTGPDRGSYKGVA
HHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHH
SLGVRPMFGENRPNLEVHIFDFAADLYGQHLSVALVEYLRPEAKFDSLEALVSQMDRDSA
HHCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHH
RAREILATR
HHHHHHCCC
>Mature Secondary Structure
MRIHHDWKALPLDARGATVAMGNFDGIHLGHRSVIDAARAACDAPLGVITFEPHPREFFA
CCCCCCCCCCCCCCCCCEEEECCCCCEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC
PDAPPFRLMNVESRANRLARLGVDHLYELPFDAVLAGLAPESFAREVLVEGLGVRHVTVG
CCCCCEEEEECHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHCCCEEEEEEC
TDFCFGRKRSGDAQTLARLGREMGFGVTVAPLIGDGAVQYSSTAIRKALAEGRTRDAERM
CCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHH
LGHWHRIDGEVLHGDKRGRDLGYPTANMGVDGLHLPALGIYAVLVDVLTGPDRGSYKGVA
HHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHH
SLGVRPMFGENRPNLEVHIFDFAADLYGQHLSVALVEYLRPEAKFDSLEALVSQMDRDSA
HHCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHH
RAREILATR
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]