Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

Click here to switch to the map view.

The map label for this gene is 119386365

Identifier: 119386365

GI number: 119386365

Start: 808582

End: 808917

Strand: Direct

Name: 119386365

Synonym: Pden_3657

Alternate gene names: NA

Gene position: 808582-808917 (Clockwise)

Preceding gene: 119386364

Following gene: 119386366

Centisome position: 46.74

GC content: 70.54

Gene sequence:

>336_bases
ATGGCGGATGAGCTTTGGCGCGAGGAACGCGAATTCTGGCTGGCCGGCGTGGCCGAGGCGGCACGCAAGCTTGACGGCTC
CTGCCTGATGGCCTTTGCGTCCAAGGGCATCATGAACCGCGCCGCCGTGGTCGCCGCGCTGCAATCCGCCCCGCGCTGGC
AAGAGGTGACCCTGGCCGACCGCGCCAGCATCGAGACCGACGAGGTCTGCGTGCTGGCCTATCACGCCACGGCCCGCCGC
GCCGGGGCCGACACCTATCGCGCGCTCTGCACCACCACCTGGATCCGCCGCGCCGGCGACTGGCGCATCCTGCAACACCA
GCAGACCCCGGTCTGA

Upstream 100 bases:

>100_bases
GGCTTTGGCGCGCTGCACCTGCCGGGCGATCATGGCGTGCTGCGACTTCTGGAAAACAGGGGCTGGACCATCAGCCCGGT
CACGGTGGAGGGGATAGGCG

Downstream 100 bases:

>100_bases
TGCTGCAGGACCTGCGCAGGCACCTGCGCTTCCTGCTGAGCTTTGCGCTTGGCCTTGCCGCGGGGCTGGCGCTTTACCGG
ATGCAACTCGTGGACAGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MADELWREEREFWLAGVAEAARKLDGSCLMAFASKGIMNRAAVVAALQSAPRWQEVTLADRASIETDEVCVLAYHATARR
AGADTYRALCTTTWIRRAGDWRILQHQQTPV

Sequences:

>Translated_111_residues
MADELWREEREFWLAGVAEAARKLDGSCLMAFASKGIMNRAAVVAALQSAPRWQEVTLADRASIETDEVCVLAYHATARR
AGADTYRALCTTTWIRRAGDWRILQHQQTPV
>Mature_110_residues
ADELWREEREFWLAGVAEAARKLDGSCLMAFASKGIMNRAAVVAALQSAPRWQEVTLADRASIETDEVCVLAYHATARRA
GADTYRALCTTTWIRRAGDWRILQHQQTPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12450; Mature: 12319

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADELWREEREFWLAGVAEAARKLDGSCLMAFASKGIMNRAAVVAALQSAPRWQEVTLAD
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEECCC
RASIETDEVCVLAYHATARRAGADTYRALCTTTWIRRAGDWRILQHQQTPV
CCCCCCCCEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCCCCC
>Mature Secondary Structure 
ADELWREEREFWLAGVAEAARKLDGSCLMAFASKGIMNRAAVVAALQSAPRWQEVTLAD
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEECCC
RASIETDEVCVLAYHATARRAGADTYRALCTTTWIRRAGDWRILQHQQTPV
CCCCCCCCEEEEEECHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA