| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386310
Identifier: 119386310
GI number: 119386310
Start: 751752
End: 753809
Strand: Direct
Name: 119386310
Synonym: Pden_3602
Alternate gene names: NA
Gene position: 751752-753809 (Clockwise)
Preceding gene: 119386309
Following gene: 119386311
Centisome position: 43.45
GC content: 60.93
Gene sequence:
>2058_bases ATGCCCGAGAGTTTTGAAGAAAAGGTCAACCGGGTTCTGCGCGACCATGAGGGTTTCACCGGGGACGGGCGCGGCGGCGT TGGCGATCTGCCCGTTGGTGACAGGTCCACCGCCAGAAAGCCCATCGACAAGCGCGGCCTGCGGGAACTGTTCCTTGCTC CGGTTGGATATGCCGCGCTGGCAGAGGCGGCGGCGGATCGTGCCGCGCTGTATGATGGATTCTGGATAGACAGCATCCCA GACCTGCGCGTAGATACCAGCTTGTCCTATAGCGGCGACGGCGCGGTCTCTGTTGGCGGATTTGTCGTTACCCGAGATAT GGGCGCTGTGTTCCGCGTTCTGTCGTCCTCCGCAACGAGGCCGCATCTCGTTACGGCCGGCGGTGTCAAGCTGGAAGTGG CATACTGGCCGCGCGATGATCGGGGCGCGCTTGCAGAGATTGGCGTGCGGGCGCAGAACGGGCAGGCGGTTTATCTAGCC GGCTATGGGGATAGCACGGTCGTAGGAACGGACAGCACTGAGACCTACAACAACTGGCCGAACCGTCTGGGCAGCATCCT TCGGGCAATGACTGGAAACGAGAGCGTCACCGTTTATAACTGCGGCGACAACGGCAAGCGGGTATCGGACTGGTGGGCGT GGGACAATCTTGCGGCAAAGATTACCACCCCGTATCCGAATACGCAGTATGTGCTGACCTGCTGGGGCACCAACGATATC AAATATGACGGGCTGCCCGACTGGAACCCGGCGCTGTTCAAGTCGCGCTATGCCGCCCATATCAACCAGATCCGCCTTGC TGGCATGGTTCCTATCATGGTCACGCCGTGGCCGGTTTCGGCGGCTCCGATGCGTCCTCTGGCGACCTATCAGGGCGAAT TGCTTAATGCGGTTCGCGAACTGGCCGACGAACTGATGGTCGATTTGATTGACACGAACGCCATGCTGAAAAACTGGCAG CGTGACCGCACCGACCAATACCGGGTCGGTGACCAGCAATCGGACGGCGTGCATTATACCGATGTGCCGCACATCCTCAT CGCCGGATATATGGCTCGGCTGATTTACCAGCATCGGGTGATCGACGTGCGGCACGGTTCGCGCCTCGGGCCGCAGGATG CAAAATTCTCGGCTGATGTGACGGTTGCCTACAACCGCAATATGAGCAACGCTTGGGGGTTCTCGGCGCAACTTACCGCT GCGGCTGCGGTTCCGATGGCCGCCGAAATCTGGGTCTGGTCGGATCGCGCCCGGAAGGCCGTCTATGTCAGCCCGGACAG ATCGGTTGTCTCGGGCGGAAACCCGGCATTCGCCTATGTCGGCCTTGCAGGAACCGGGACCGATGCGGGGGTTGAAATTG GATTCGGCAATGCGGGGGTCACGACCACCGAACGGCCGGCCGAGAACCATATCTATGTGAATGAACTGCCGTTCGGCTTG TCACGGCTGCGCTTCCGGGCCTCCGGGGCCGGAACGGTCGAATTTGGCGGATGGCTGATCGTGGATCAGTTCGACCCGGT TTCTGTTTCCGCTTATTCCATTGCATCGGAACGTCAACTGTTCCTGCCCGAGTTTGCGGATAGTCGCCCCGAGGTGGTTC CGAAGGCCGGCGCGATTACCAATCTTGCCTTGATCGGCAACATTCCTGTCGGGTGGGGTGTCGTGATCGGAACCCAATAC GTCTACGCCAATGATTCGAACACCGGGCCGTCGCGCCGCAAAATGAGCATCGTCGCTCTGCGCGCGTCCTCAGGGGCCGA TATTCTGCGGGTGCTAAGTGGCGCGTCCGCAGGTGTGTTCGCCGCTACCTCGATCAAAACCAGTGGTTCCGGGTCGTGGG CGGGGCAGATCACGATCCATTGCACCACTGACGGCAGCGGCAATGCCGATATTCAAGTGCGGGCGGACGGAGCGATCATC GCCCGCCACACCAATGGCGGCACCGATCCGTTCATGTCACCATATGGCCGCATGGGCGGCCTCTACCGGGATAATACTCT GGTCAGCGATCCGGGCGGACGACAGGCCGTCGCCACGCTGATCCCGATGCCGACCTAA
Upstream 100 bases:
>100_bases AGGGCACGCCGGCCGGGCCTGCGAATATTACCACGCCCTGACTTGACAGCACATCAGCGACCTAGGATCGCTTTGGCGAC CCCTTTGTATTGGAGGCGAG
Downstream 100 bases:
>100_bases CCAACCCCGCCATCAGACTATGACCGGGCCCGCTTTTGGCGGGCCTTTTTTGCATGGAGTGACGCATGCAGGTAGCACGC ATCAAGCGCGGCGCCACATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 685; Mature: 684
Protein sequence:
>685_residues MPESFEEKVNRVLRDHEGFTGDGRGGVGDLPVGDRSTARKPIDKRGLRELFLAPVGYAALAEAAADRAALYDGFWIDSIP DLRVDTSLSYSGDGAVSVGGFVVTRDMGAVFRVLSSSATRPHLVTAGGVKLEVAYWPRDDRGALAEIGVRAQNGQAVYLA GYGDSTVVGTDSTETYNNWPNRLGSILRAMTGNESVTVYNCGDNGKRVSDWWAWDNLAAKITTPYPNTQYVLTCWGTNDI KYDGLPDWNPALFKSRYAAHINQIRLAGMVPIMVTPWPVSAAPMRPLATYQGELLNAVRELADELMVDLIDTNAMLKNWQ RDRTDQYRVGDQQSDGVHYTDVPHILIAGYMARLIYQHRVIDVRHGSRLGPQDAKFSADVTVAYNRNMSNAWGFSAQLTA AAAVPMAAEIWVWSDRARKAVYVSPDRSVVSGGNPAFAYVGLAGTGTDAGVEIGFGNAGVTTTERPAENHIYVNELPFGL SRLRFRASGAGTVEFGGWLIVDQFDPVSVSAYSIASERQLFLPEFADSRPEVVPKAGAITNLALIGNIPVGWGVVIGTQY VYANDSNTGPSRRKMSIVALRASSGADILRVLSGASAGVFAATSIKTSGSGSWAGQITIHCTTDGSGNADIQVRADGAII ARHTNGGTDPFMSPYGRMGGLYRDNTLVSDPGGRQAVATLIPMPT
Sequences:
>Translated_685_residues MPESFEEKVNRVLRDHEGFTGDGRGGVGDLPVGDRSTARKPIDKRGLRELFLAPVGYAALAEAAADRAALYDGFWIDSIP DLRVDTSLSYSGDGAVSVGGFVVTRDMGAVFRVLSSSATRPHLVTAGGVKLEVAYWPRDDRGALAEIGVRAQNGQAVYLA GYGDSTVVGTDSTETYNNWPNRLGSILRAMTGNESVTVYNCGDNGKRVSDWWAWDNLAAKITTPYPNTQYVLTCWGTNDI KYDGLPDWNPALFKSRYAAHINQIRLAGMVPIMVTPWPVSAAPMRPLATYQGELLNAVRELADELMVDLIDTNAMLKNWQ RDRTDQYRVGDQQSDGVHYTDVPHILIAGYMARLIYQHRVIDVRHGSRLGPQDAKFSADVTVAYNRNMSNAWGFSAQLTA AAAVPMAAEIWVWSDRARKAVYVSPDRSVVSGGNPAFAYVGLAGTGTDAGVEIGFGNAGVTTTERPAENHIYVNELPFGL SRLRFRASGAGTVEFGGWLIVDQFDPVSVSAYSIASERQLFLPEFADSRPEVVPKAGAITNLALIGNIPVGWGVVIGTQY VYANDSNTGPSRRKMSIVALRASSGADILRVLSGASAGVFAATSIKTSGSGSWAGQITIHCTTDGSGNADIQVRADGAII ARHTNGGTDPFMSPYGRMGGLYRDNTLVSDPGGRQAVATLIPMPT >Mature_684_residues PESFEEKVNRVLRDHEGFTGDGRGGVGDLPVGDRSTARKPIDKRGLRELFLAPVGYAALAEAAADRAALYDGFWIDSIPD LRVDTSLSYSGDGAVSVGGFVVTRDMGAVFRVLSSSATRPHLVTAGGVKLEVAYWPRDDRGALAEIGVRAQNGQAVYLAG YGDSTVVGTDSTETYNNWPNRLGSILRAMTGNESVTVYNCGDNGKRVSDWWAWDNLAAKITTPYPNTQYVLTCWGTNDIK YDGLPDWNPALFKSRYAAHINQIRLAGMVPIMVTPWPVSAAPMRPLATYQGELLNAVRELADELMVDLIDTNAMLKNWQR DRTDQYRVGDQQSDGVHYTDVPHILIAGYMARLIYQHRVIDVRHGSRLGPQDAKFSADVTVAYNRNMSNAWGFSAQLTAA AAVPMAAEIWVWSDRARKAVYVSPDRSVVSGGNPAFAYVGLAGTGTDAGVEIGFGNAGVTTTERPAENHIYVNELPFGLS RLRFRASGAGTVEFGGWLIVDQFDPVSVSAYSIASERQLFLPEFADSRPEVVPKAGAITNLALIGNIPVGWGVVIGTQYV YANDSNTGPSRRKMSIVALRASSGADILRVLSGASAGVFAATSIKTSGSGSWAGQITIHCTTDGSGNADIQVRADGAIIA RHTNGGTDPFMSPYGRMGGLYRDNTLVSDPGGRQAVATLIPMPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73604; Mature: 73473
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPESFEEKVNRVLRDHEGFTGDGRGGVGDLPVGDRSTARKPIDKRGLRELFLAPVGYAAL CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHH AEAAADRAALYDGFWIDSIPDLRVDTSLSYSGDGAVSVGGFVVTRDMGAVFRVLSSSATR HHHHHHHHHHCCCEECCCCCCCEECCEECCCCCCCEEECCEEEEEHHHHHHHHHHCCCCC PHLVTAGGVKLEVAYWPRDDRGALAEIGVRAQNGQAVYLAGYGDSTVVGTDSTETYNNWP CEEEEECCEEEEEEECCCCCCCCHHHCCEEECCCCEEEEEECCCCEEEECCCCCCCCCCH NRLGSILRAMTGNESVTVYNCGDNGKRVSDWWAWDNLAAKITTPYPNTQYVLTCWGTNDI HHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEEECCCCE KYDGLPDWNPALFKSRYAAHINQIRLAGMVPIMVTPWPVSAAPMRPLATYQGELLNAVRE EECCCCCCCHHHHHHHHHHHHHEEEEEEECEEEEECCCCCCCCCCCHHHHHHHHHHHHHH LADELMVDLIDTNAMLKNWQRDRTDQYRVGDQQSDGVHYTDVPHILIAGYMARLIYQHRV HHHHHHHHHHCCHHHHHHHHHCCCCCEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHE IDVRHGSRLGPQDAKFSADVTVAYNRNMSNAWGFSAQLTAAAAVPMAAEIWVWSDRARKA EEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEHHHHHCCCEEEEEEECCCCCEE VYVSPDRSVVSGGNPAFAYVGLAGTGTDAGVEIGFGNAGVTTTERPAENHIYVNELPFGL EEECCCCCEECCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCH SRLRFRASGAGTVEFGGWLIVDQFDPVSVSAYSIASERQLFLPEFADSRPEVVPKAGAIT HHEEEECCCCCEEEECCEEEEECCCCCEEEEEEECCCCEEECCHHCCCCCCCCCCCCCEE NLALIGNIPVGWGVVIGTQYVYANDSNTGPSRRKMSIVALRASSGADILRVLSGASAGVF EEEEEECCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCHHHHHHCCCCCCEE AATSIKTSGSGSWAGQITIHCTTDGSGNADIQVRADGAIIARHTNGGTDPFMSPYGRMGG EEEEEEECCCCCEEEEEEEEEECCCCCCEEEEEEECCEEEEEECCCCCCCCCCCHHHCCC LYRDNTLVSDPGGRQAVATLIPMPT EEECCEEEECCCCCEEEEEEECCCC >Mature Secondary Structure PESFEEKVNRVLRDHEGFTGDGRGGVGDLPVGDRSTARKPIDKRGLRELFLAPVGYAAL CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHH AEAAADRAALYDGFWIDSIPDLRVDTSLSYSGDGAVSVGGFVVTRDMGAVFRVLSSSATR HHHHHHHHHHCCCEECCCCCCCEECCEECCCCCCCEEECCEEEEEHHHHHHHHHHCCCCC PHLVTAGGVKLEVAYWPRDDRGALAEIGVRAQNGQAVYLAGYGDSTVVGTDSTETYNNWP CEEEEECCEEEEEEECCCCCCCCHHHCCEEECCCCEEEEEECCCCEEEECCCCCCCCCCH NRLGSILRAMTGNESVTVYNCGDNGKRVSDWWAWDNLAAKITTPYPNTQYVLTCWGTNDI HHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCEEEEECCCCCCCEEEEEECCCCE KYDGLPDWNPALFKSRYAAHINQIRLAGMVPIMVTPWPVSAAPMRPLATYQGELLNAVRE EECCCCCCCHHHHHHHHHHHHHEEEEEEECEEEEECCCCCCCCCCCHHHHHHHHHHHHHH LADELMVDLIDTNAMLKNWQRDRTDQYRVGDQQSDGVHYTDVPHILIAGYMARLIYQHRV HHHHHHHHHHCCHHHHHHHHHCCCCCEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHE IDVRHGSRLGPQDAKFSADVTVAYNRNMSNAWGFSAQLTAAAAVPMAAEIWVWSDRARKA EEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEHHHHHCCCEEEEEEECCCCCEE VYVSPDRSVVSGGNPAFAYVGLAGTGTDAGVEIGFGNAGVTTTERPAENHIYVNELPFGL EEECCCCCEECCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCCH SRLRFRASGAGTVEFGGWLIVDQFDPVSVSAYSIASERQLFLPEFADSRPEVVPKAGAIT HHEEEECCCCCEEEECCEEEEECCCCCEEEEEEECCCCEEECCHHCCCCCCCCCCCCCEE NLALIGNIPVGWGVVIGTQYVYANDSNTGPSRRKMSIVALRASSGADILRVLSGASAGVF EEEEEECCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEEEECCCCCHHHHHHCCCCCCEE AATSIKTSGSGSWAGQITIHCTTDGSGNADIQVRADGAIIARHTNGGTDPFMSPYGRMGG EEEEEEECCCCCEEEEEEEEEECCCCCCEEEEEEECCEEEEEECCCCCCCCCCCHHHCCC LYRDNTLVSDPGGRQAVATLIPMPT EEECCEEEECCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA