Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119386274

Identifier: 119386274

GI number: 119386274

Start: 715570

End: 715953

Strand: Direct

Name: 119386274

Synonym: Pden_3565

Alternate gene names: NA

Gene position: 715570-715953 (Clockwise)

Preceding gene: 119386273

Following gene: 119386275

Centisome position: 41.36

GC content: 67.19

Gene sequence:

>384_bases
ATGCGACTGATGTTTCTTGTCCCGCTGTTGCTGCCGATGCCGGCGGCGGCCTTTACGGCCCAGAACGGCATGACGGTAAC
GCAGATCGGCCCGACCGAGATCGCGGTCGCCCATGAGGCAAGACGAGACGACACCGATTATTGGTGCGCTGCGGGCGACT
TTGCGCGGCGGGTCCTGGGGCAGCCCAGCCAGACGCGGATCTGGCGCGCCACGCCCAAGCCGCGCAAGGCGGGGCAAGGC
ATCGTCTTCACTCTCGATCCCGCGCAAAAGGCCGAAGGGGCCGGGTTGTCCGAGTTCGGTTCGGGACCGCAGGACGGCTC
CCTGTCGGCCGGGATGGCCGTGGGAAGCTTTTGCCGCGTGCGCATGCCGTTCTGGCGGGATTGA

Upstream 100 bases:

>100_bases
GGGTACGCCCAGGGTTTCCGGAAATCTTTGCACCCGGCGAATATTGGCTCTGTCCCTGCCCATGAAGCAGTATACTCTGG
ATGTCCCAGGGGAATGTGCG

Downstream 100 bases:

>100_bases
GCGCCGGGGCCTTGGCCGCGCCCTCTCTGCCGATCGTCCTGCGCTTTCTCCAAGGCGTCGCGGTCGGAGGCGCCCCGGAG
CTTGCGAGGGGGCTATGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MRLMFLVPLLLPMPAAAFTAQNGMTVTQIGPTEIAVAHEARRDDTDYWCAAGDFARRVLGQPSQTRIWRATPKPRKAGQG
IVFTLDPAQKAEGAGLSEFGSGPQDGSLSAGMAVGSFCRVRMPFWRD

Sequences:

>Translated_127_residues
MRLMFLVPLLLPMPAAAFTAQNGMTVTQIGPTEIAVAHEARRDDTDYWCAAGDFARRVLGQPSQTRIWRATPKPRKAGQG
IVFTLDPAQKAEGAGLSEFGSGPQDGSLSAGMAVGSFCRVRMPFWRD
>Mature_127_residues
MRLMFLVPLLLPMPAAAFTAQNGMTVTQIGPTEIAVAHEARRDDTDYWCAAGDFARRVLGQPSQTRIWRATPKPRKAGQG
IVFTLDPAQKAEGAGLSEFGSGPQDGSLSAGMAVGSFCRVRMPFWRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13754; Mature: 13754

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLMFLVPLLLPMPAAAFTAQNGMTVTQIGPTEIAVAHEARRDDTDYWCAAGDFARRVLG
CCHHHHHHHHHCCCCHHEECCCCEEEEEECCCEEEEECCCCCCCCCEEEECHHHHHHHHC
QPSQTRIWRATPKPRKAGQGIVFTLDPAQKAEGAGLSEFGSGPQDGSLSAGMAVGSFCRV
CCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHCCCCCCCCCCCCCHHHCCHHEE
RMPFWRD
CCCCCCC
>Mature Secondary Structure
MRLMFLVPLLLPMPAAAFTAQNGMTVTQIGPTEIAVAHEARRDDTDYWCAAGDFARRVLG
CCHHHHHHHHHCCCCHHEECCCCEEEEEECCCEEEEECCCCCCCCCEEEECHHHHHHHHC
QPSQTRIWRATPKPRKAGQGIVFTLDPAQKAEGAGLSEFGSGPQDGSLSAGMAVGSFCRV
CCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHCCCCCCCCCCCCCHHHCCHHEE
RMPFWRD
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA