Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
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Accession | NC_008687 |
Length | 1,730,097 |
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The map label for this gene is yjdJ [C]
Identifier: 119386216
GI number: 119386216
Start: 649884
End: 650186
Strand: Direct
Name: yjdJ [C]
Synonym: Pden_3505
Alternate gene names: 119386216
Gene position: 649884-650186 (Clockwise)
Preceding gene: 119386215
Following gene: 119386217
Centisome position: 37.56
GC content: 63.37
Gene sequence:
>303_bases ATGTCCCGGAACATCGTGCAGATTTCCTATGAAGACCAGGATCGCAAGGGCCGCTATGTGGCCCGCATCGAGGGGGTGGA GGGCGAAGGCGAGCTGACCATCTCGAAAGTGTCGGACGTGCTCATCATTGCCGACCACACCTATGTTCCCGATACGATGC GGGGCAGCGGCGCGGCCTCGGCGCTGGTGAACCGGCTCATCGAGGATGCCCGTGCCAAGGGGCAGCGGATCGTGCCGCTG TGCCCCTTCGTGCGCGCGCAGTCCCTTCGCCATCCGGAATGGTCCGATGTCATCCAGAACTGA
Upstream 100 bases:
>100_bases TCCGGCGCCAATGCGCCGGGCGCCCGGAAGCGGAAACCATGGCCGGACGCACCCGAGCGACGCCGCGTCGGCCAGCTAAG CGAAAACAAGGATTGGAACC
Downstream 100 bases:
>100_bases CCCCGCCGGCCCGGTCAAGTTCATCGCGCTGGAACTGATCGCCTCGGCCATGATCCTGACCGGATTCCGGCGTTGGCTGG GCGCGCTGGCGCTTGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Acetyltransferase; YjdJ Protein; Acetyltransferase-Like
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MSRNIVQISYEDQDRKGRYVARIEGVEGEGELTISKVSDVLIIADHTYVPDTMRGSGAASALVNRLIEDARAKGQRIVPL CPFVRAQSLRHPEWSDVIQN
Sequences:
>Translated_100_residues MSRNIVQISYEDQDRKGRYVARIEGVEGEGELTISKVSDVLIIADHTYVPDTMRGSGAASALVNRLIEDARAKGQRIVPL CPFVRAQSLRHPEWSDVIQN >Mature_99_residues SRNIVQISYEDQDRKGRYVARIEGVEGEGELTISKVSDVLIIADHTYVPDTMRGSGAASALVNRLIEDARAKGQRIVPLC PFVRAQSLRHPEWSDVIQN
Specific function: Unknown
COG id: COG2388
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11165; Mature: 11034
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNIVQISYEDQDRKGRYVARIEGVEGEGELTISKVSDVLIIADHTYVPDTMRGSGAAS CCCCEEEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCHHH ALVNRLIEDARAKGQRIVPLCPFVRAQSLRHPEWSDVIQN HHHHHHHHHHHHCCCEECCCCCHHHHHCCCCCCHHHHHCC >Mature Secondary Structure SRNIVQISYEDQDRKGRYVARIEGVEGEGELTISKVSDVLIIADHTYVPDTMRGSGAAS CCCEEEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCHHH ALVNRLIEDARAKGQRIVPLCPFVRAQSLRHPEWSDVIQN HHHHHHHHHHHHCCCEECCCCCHHHHHCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA