Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
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Accession | NC_008687 |
Length | 1,730,097 |
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The map label for this gene is 119386153
Identifier: 119386153
GI number: 119386153
Start: 583029
End: 583505
Strand: Direct
Name: 119386153
Synonym: Pden_3441
Alternate gene names: NA
Gene position: 583029-583505 (Clockwise)
Preceding gene: 119386152
Following gene: 119386154
Centisome position: 33.7
GC content: 70.65
Gene sequence:
>477_bases ATGCGTCGCTTTTTCATGATCACCGCGATCGCGGCAACGACCTTGGGCAGCAGCCAGATGGCCATGGCCGAGACCCGCCC GGACGGCCCGCCGCCGGAATGCCGGCAGAACGACCGCAAATGCCCCGCGCCCCCGTCCAAGGACGCTCGCAAGAAAGGGG AACGGTCCAAGGGCGAGCACCGGCCGCCGCCTTCGGCAGAAGCCCGGCGCGACGGGCACAAGCCGCGCCAGGCGCCGGAT CACCGCCCGGGAGAGGGGCGGGAAGCGAAAGGCAAGCCTCCGGCGGATGGGCGCCAAGCCCTGCGCGTGGGCGACAGCGG CCGCGACGGCCGTGCCTTCCAGCGCGCCGGCAACAGCCGCTATGCCCCTGCACCGCGCGGGCAGGAATATCGCGTGATCC GCGACCAACTCGTGCTGGTGGACCAGAAGAGCAAGCGGATCGTTTCCATCCTCGGCCCGATCCACGCGCAACGCTGA
Upstream 100 bases:
>100_bases CCCGGCATCAACCCGCGCCGGCGCGCTGAGCCGGCCCGCGTCGGGCAAAGGCGCCCGACGCGCCCTTCTTCCAGACCGCA GAACAGCAAGGACAGATGCA
Downstream 100 bases:
>100_bases AGGGGAAGCCCATGAAAAGGATGATGATCCTGGTGGCCATGACGCTGCTGAACCTGGCCACGACTCCTGCCTTGGCCGAG CCCGCCGCGCATTGCGGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MRRFFMITAIAATTLGSSQMAMAETRPDGPPPECRQNDRKCPAPPSKDARKKGERSKGEHRPPPSAEARRDGHKPRQAPD HRPGEGREAKGKPPADGRQALRVGDSGRDGRAFQRAGNSRYAPAPRGQEYRVIRDQLVLVDQKSKRIVSILGPIHAQR
Sequences:
>Translated_158_residues MRRFFMITAIAATTLGSSQMAMAETRPDGPPPECRQNDRKCPAPPSKDARKKGERSKGEHRPPPSAEARRDGHKPRQAPD HRPGEGREAKGKPPADGRQALRVGDSGRDGRAFQRAGNSRYAPAPRGQEYRVIRDQLVLVDQKSKRIVSILGPIHAQR >Mature_158_residues MRRFFMITAIAATTLGSSQMAMAETRPDGPPPECRQNDRKCPAPPSKDARKKGERSKGEHRPPPSAEARRDGHKPRQAPD HRPGEGREAKGKPPADGRQALRVGDSGRDGRAFQRAGNSRYAPAPRGQEYRVIRDQLVLVDQKSKRIVSILGPIHAQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17473; Mature: 17473
Theoretical pI: Translated: 11.57; Mature: 11.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFFMITAIAATTLGSSQMAMAETRPDGPPPECRQNDRKCPAPPSKDARKKGERSKGEH CCCEEEHHHHHHHHCCCCHHHHHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHCCCCCCCC RPPPSAEARRDGHKPRQAPDHRPGEGREAKGKPPADGRQALRVGDSGRDGRAFQRAGNSR CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCCHHHHHCCCCC YAPAPRGQEYRVIRDQLVLVDQKSKRIVSILGPIHAQR CCCCCCCCCHHHHHHHHHEECCCCHHHHHHHHHHHCCC >Mature Secondary Structure MRRFFMITAIAATTLGSSQMAMAETRPDGPPPECRQNDRKCPAPPSKDARKKGERSKGEH CCCEEEHHHHHHHHCCCCHHHHHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHCCCCCCCC RPPPSAEARRDGHKPRQAPDHRPGEGREAKGKPPADGRQALRVGDSGRDGRAFQRAGNSR CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCCCCCHHHHHCCCCC YAPAPRGQEYRVIRDQLVLVDQKSKRIVSILGPIHAQR CCCCCCCCCHHHHHHHHHEECCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA