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The map label for this gene is rutD [H]

Identifier: 119357396

GI number: 119357396

Start: 1809842

End: 1810669

Strand: Direct

Name: rutD [H]

Synonym: Cpha266_1595

Alternate gene names: 119357396

Gene position: 1809842-1810669 (Clockwise)

Preceding gene: 119357391

Following gene: 119357398

Centisome position: 57.75

GC content: 52.05

Gene sequence:

>828_bases
ATGAAGCAGATCCCCCGATCAATCAGTCCGGAAATTGCAGCATCTCAGCTTCAGGTCATGGACATAACGATGAACTGCCG
TGTGCTTGGCAGTGGTCACCCGCTTCTGATGATCATGGGTTACGGAAGCACAATGAACCTGTGGGAATCAACGCTGCTTG
AAAAGCTTGCTGAACACTTCAAGGTCATTGTGTTCGACAATCGGGGAATTGGCGGCACGCAAACGGGAACGCAGCCTTTT
TCCATCGGGCAGTTTGCCGAAGACAGTGCAGCGCTTCTGCAATCGCTGGATGTCGAACATGCGCATGTGCTTGGATGGTC
GATGGGATCGCTGATCGCACAGGAACTCGCCTTGCGGCATCCCTCCCTGATCAGCAAACTGATTCTCTACGCTGCCCATT
GCGATGCAAAAATGTTTCCGCCTTCACCTGAGGTGCTGACAATGCTCACCGACACATCCGGAACACCTGAAGAGCGCGGC
ATGCGATACATCAGCACGCTTTTTCCCGAAAACTGGCTCCATGGTAATGGTCAGCGCATGAAAGAGATCTTTTTTCGGCC
CATGGGTACAATACCTGAAGAGAGCGTCGGCAGGCAGGCCGCGGCAATTGACGAATGGAACGGAACAACCGGAAAGCTTG
GAGAGATCACCTGCCCGACGCTTCTGATTACCGGTTCTGAGGATAAACTGACGGTTCCTGATAATGCGAGGTATATGTCC
GAAAGGATTCCCGATGCTGAACTGATCATTATCGAAAACGGCGGCCATGGCCTTATGTTCCAGTATCCTGAAATTTTCCG
CGACAGCGTAATCGGCTTTCTCGGATAA

Upstream 100 bases:

>100_bases
AACGCAATTCGTTACATTGAAAACATCCACTCTTCGGATTACTGTAAGGCAGCGCAAATGCCTTCCAAAAACCTTCACCA
CAAAACAGGGAGCGTTCATT

Downstream 100 bases:

>100_bases
GCGAAACATGATACCATAGAGGGCGACGAACATGAAAAGCGAGCTGTTAAACCGGAAGCACCCGTTCGCCTTCCGCCAGA
TTCGTCTCCTTCATAAGCAA

Product: alpha/beta hydrolase fold

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MKQIPRSISPEIAASQLQVMDITMNCRVLGSGHPLLMIMGYGSTMNLWESTLLEKLAEHFKVIVFDNRGIGGTQTGTQPF
SIGQFAEDSAALLQSLDVEHAHVLGWSMGSLIAQELALRHPSLISKLILYAAHCDAKMFPPSPEVLTMLTDTSGTPEERG
MRYISTLFPENWLHGNGQRMKEIFFRPMGTIPEESVGRQAAAIDEWNGTTGKLGEITCPTLLITGSEDKLTVPDNARYMS
ERIPDAELIIIENGGHGLMFQYPEIFRDSVIGFLG

Sequences:

>Translated_275_residues
MKQIPRSISPEIAASQLQVMDITMNCRVLGSGHPLLMIMGYGSTMNLWESTLLEKLAEHFKVIVFDNRGIGGTQTGTQPF
SIGQFAEDSAALLQSLDVEHAHVLGWSMGSLIAQELALRHPSLISKLILYAAHCDAKMFPPSPEVLTMLTDTSGTPEERG
MRYISTLFPENWLHGNGQRMKEIFFRPMGTIPEESVGRQAAAIDEWNGTTGKLGEITCPTLLITGSEDKLTVPDNARYMS
ERIPDAELIIIENGGHGLMFQYPEIFRDSVIGFLG
>Mature_275_residues
MKQIPRSISPEIAASQLQVMDITMNCRVLGSGHPLLMIMGYGSTMNLWESTLLEKLAEHFKVIVFDNRGIGGTQTGTQPF
SIGQFAEDSAALLQSLDVEHAHVLGWSMGSLIAQELALRHPSLISKLILYAAHCDAKMFPPSPEVLTMLTDTSGTPEERG
MRYISTLFPENWLHGNGQRMKEIFFRPMGTIPEESVGRQAAAIDEWNGTTGKLGEITCPTLLITGSEDKLTVPDNARYMS
ERIPDAELIIIENGGHGLMFQYPEIFRDSVIGFLG

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 30323; Mature: 30323

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIPRSISPEIAASQLQVMDITMNCRVLGSGHPLLMIMGYGSTMNLWESTLLEKLAEHF
CCCCCCCCCCHHHHCEEEEEEEEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHC
KVIVFDNRGIGGTQTGTQPFSIGQFAEDSAALLQSLDVEHAHVLGWSMGSLIAQELALRH
EEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
PSLISKLILYAAHCDAKMFPPSPEVLTMLTDTSGTPEERGMRYISTLFPENWLHGNGQRM
HHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHH
KEIFFRPMGTIPEESVGRQAAAIDEWNGTTGKLGEITCPTLLITGSEDKLTVPDNARYMS
HHHHHCCCCCCCHHHHCCHHHHHCCCCCCCCCCCCEECCEEEEECCCCCEECCCCHHHHH
ERIPDAELIIIENGGHGLMFQYPEIFRDSVIGFLG
HCCCCCEEEEEECCCCCEEEECHHHHHHHHHHHCC
>Mature Secondary Structure
MKQIPRSISPEIAASQLQVMDITMNCRVLGSGHPLLMIMGYGSTMNLWESTLLEKLAEHF
CCCCCCCCCCHHHHCEEEEEEEEEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHC
KVIVFDNRGIGGTQTGTQPFSIGQFAEDSAALLQSLDVEHAHVLGWSMGSLIAQELALRH
EEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
PSLISKLILYAAHCDAKMFPPSPEVLTMLTDTSGTPEERGMRYISTLFPENWLHGNGQRM
HHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHH
KEIFFRPMGTIPEESVGRQAAAIDEWNGTTGKLGEITCPTLLITGSEDKLTVPDNARYMS
HHHHHCCCCCCCHHHHCCHHHHHCCCCCCCCCCCCEECCEEEEECCCCCEECCCCHHHHH
ERIPDAELIIIENGGHGLMFQYPEIFRDSVIGFLG
HCCCCCEEEEEECCCCCEEEECHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA