Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357371
Identifier: 119357371
GI number: 119357371
Start: 1784778
End: 1785647
Strand: Direct
Name: 119357371
Synonym: Cpha266_1569
Alternate gene names: NA
Gene position: 1784778-1785647 (Clockwise)
Preceding gene: 119357370
Following gene: 119357372
Centisome position: 56.95
GC content: 47.47
Gene sequence:
>870_bases GTGCCGAATTATTTTTTCAGAAACAAACTTCATCTCTCATCTCTTTCCGCGCTTGGGGCTGTGAGCTGGTCTGTTTATTT CGATATCCCGGTCAATGGATGGGCCATTTTGTCCGTCTTCATGCTTACTTTTTCAATCTACCAGGACAACCGGCTTACCG ATGATAACGAAGACTCGACGAACGATCCTGAAGGCCTGAAAAACGCTCTCAAGCACGAAACGCTTATCACCTATGTGACC TTCTACCTTCTCTCCTTCATATCGCTCCTTATCGCTTTTCAATTCGAACAACCTGCGTTCTGGACGACGGCGCTTATCAT CCTCATCGGTTTTCTGTATAATCACAAGTGCTTTCCGGCTTTTCTATCCAGACAGTTGAACGGCGCCCGTCGGCTGAAAG ACATCTACATCGTAAAAAATCTCACTCCTCCGCTCGACTGGGCGACTGCTCTTGTCTTTCTGCCCCTGTTTTTCGAGGGT CAAACACTATCGCCCAAGGCATGGATCAGTTGGGGATATGTGTTCGTATGCGCGTTTTTTGTAGAGGTAATGTGGGACAT GCGCGATCACCGGGGCGACCGGCAGAGCGGCATCAGAACGATTGCCAATACGTTATCCTTTTCGCAAACGAAACTGCTGC TCATCGTCACAAGCCTGATCTCCGGGCTTCTCCTGTTTTATTGTACCTTTATAAAATATCTTCCGGCATCCACCTATTTC CTTTTAGCCAATAATATCGCCGTTATAATAATCGCGAGTCTGTACAAGGAGAACGAGGTGGAGTTTATGCGGAAAATCAG TGACCTGACCATTCTTCTGGCCGCTCTCCTTTTTCTCTCTTTCGGCTTGATCGCCGCTTTTTCGAACTGA
Upstream 100 bases:
>100_bases CATCAACTTGATGCCACCTGTACCGGGTTAATACAAAAGCAGAAAGAAAAACTGGTTACGTACGACGCCATAAATCGGAT AACCGAAAAAAGAACGAAAC
Downstream 100 bases:
>100_bases CCCGATGCTTTTTTTTCATCATCTAAAACTTTGCGCCCTGTTCAAACCCAAAGCCATCGAATGGGGGGGGGGAATTTCAG TCGCTTCTGGCGACATCTGG
Product: UbiA prenyltransferase
Products: NA
Alternate protein names: Prenyltransferase
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MPNYFFRNKLHLSSLSALGAVSWSVYFDIPVNGWAILSVFMLTFSIYQDNRLTDDNEDSTNDPEGLKNALKHETLITYVT FYLLSFISLLIAFQFEQPAFWTTALIILIGFLYNHKCFPAFLSRQLNGARRLKDIYIVKNLTPPLDWATALVFLPLFFEG QTLSPKAWISWGYVFVCAFFVEVMWDMRDHRGDRQSGIRTIANTLSFSQTKLLLIVTSLISGLLLFYCTFIKYLPASTYF LLANNIAVIIIASLYKENEVEFMRKISDLTILLAALLFLSFGLIAAFSN
Sequences:
>Translated_289_residues MPNYFFRNKLHLSSLSALGAVSWSVYFDIPVNGWAILSVFMLTFSIYQDNRLTDDNEDSTNDPEGLKNALKHETLITYVT FYLLSFISLLIAFQFEQPAFWTTALIILIGFLYNHKCFPAFLSRQLNGARRLKDIYIVKNLTPPLDWATALVFLPLFFEG QTLSPKAWISWGYVFVCAFFVEVMWDMRDHRGDRQSGIRTIANTLSFSQTKLLLIVTSLISGLLLFYCTFIKYLPASTYF LLANNIAVIIIASLYKENEVEFMRKISDLTILLAALLFLSFGLIAAFSN >Mature_288_residues PNYFFRNKLHLSSLSALGAVSWSVYFDIPVNGWAILSVFMLTFSIYQDNRLTDDNEDSTNDPEGLKNALKHETLITYVTF YLLSFISLLIAFQFEQPAFWTTALIILIGFLYNHKCFPAFLSRQLNGARRLKDIYIVKNLTPPLDWATALVFLPLFFEGQ TLSPKAWISWGYVFVCAFFVEVMWDMRDHRGDRQSGIRTIANTLSFSQTKLLLIVTSLISGLLLFYCTFIKYLPASTYFL LANNIAVIIIASLYKENEVEFMRKISDLTILLAALLFLSFGLIAAFSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33072; Mature: 32941
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNYFFRNKLHLSSLSALGAVSWSVYFDIPVNGWAILSVFMLTFSIYQDNRLTDDNEDST CCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC NDPEGLKNALKHETLITYVTFYLLSFISLLIAFQFEQPAFWTTALIILIGFLYNHKCFPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHH FLSRQLNGARRLKDIYIVKNLTPPLDWATALVFLPLFFEGQTLSPKAWISWGYVFVCAFF HHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VEVMWDMRDHRGDRQSGIRTIANTLSFSQTKLLLIVTSLISGLLLFYCTFIKYLPASTYF HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE LLANNIAVIIIASLYKENEVEFMRKISDLTILLAALLFLSFGLIAAFSN EECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PNYFFRNKLHLSSLSALGAVSWSVYFDIPVNGWAILSVFMLTFSIYQDNRLTDDNEDST CCCCCCCCHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC NDPEGLKNALKHETLITYVTFYLLSFISLLIAFQFEQPAFWTTALIILIGFLYNHKCFPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHH FLSRQLNGARRLKDIYIVKNLTPPLDWATALVFLPLFFEGQTLSPKAWISWGYVFVCAFF HHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH VEVMWDMRDHRGDRQSGIRTIANTLSFSQTKLLLIVTSLISGLLLFYCTFIKYLPASTYF HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE LLANNIAVIIIASLYKENEVEFMRKISDLTILLAALLFLSFGLIAAFSN EECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA