Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357362
Identifier: 119357362
GI number: 119357362
Start: 1771346
End: 1772284
Strand: Direct
Name: 119357362
Synonym: Cpha266_1560
Alternate gene names: NA
Gene position: 1771346-1772284 (Clockwise)
Preceding gene: 119357361
Following gene: 119357370
Centisome position: 56.52
GC content: 49.09
Gene sequence:
>939_bases ATGACCATGACCAGCGTAACGACACTATACGGCGAGCTTACAGGAATCGAGTTCCGGTCGCTTTTTTCAAACGGCAAGAC CGATGGTTGCCTTGTAACAAAACCAAACCTGCTGAAAACCCCATATGGCGAACTGATTCCGCAATATGAAGCAGAAGATA TGGGGAGACGGTCGACAAAACCGCTCTACTTCTATAAAAACGGGGCTCTTAAATCCATAGCCCTGCAAACATCGACAATG CTTGACACCCCTGCCGGGGTTATCCCGGCAGAACTCGTTACCTTTCATAAAAACGGCAGAATCAAGCGTATCTTTCCGCT TGACGGAAAACTCAGCGGCTACTGGTCGTGGCAAAACGAGTTTGCCCTTGCCAAACCCCTGAGTCTTGATTCGCCGGCAG GCAAACTGAACGCAAAAATGATCGGCGTCCAGTTTTACGAGAGCGGTGCACTGAAAAGCATTACGCTCTGGCCTGGACAA ACGCTTACCGTTGCAACCCCGGTTGGCGAAATAACCGTAAGAAAAGGGCTTGCTTTTTATGAATCGGGCGAGATCCGTTC GTTCGAGCCCTTGAAAAAAGTTGAACTCCGCACCCCTATCGGTCGGGTGCTTGCCTACGATAATGAACCTAACGGCATTC ACGGCGACATCAATTCCGTACAGCTCTCTGTTGACGGAAGCATCGAGGCATTCAGTACGGTTGATCATACCGTTTCGGTA GGTTTGTCAGATGAAAAGTATGAACTGTTCGAACCGGGAGAAAAAAACAATGTCTGCGGAGATGAGCGCAAGGTGAGCGT GCCGATGAAGGTTCGGTTCCATGAAAACCGGGTAATCTTTCACGATAACCCGAAACACTCGTTCGAACTGGAAAAATACC GGTTTGAAATAAAGCCCGTTATAAAAAAAGCTGCCGAGCCGGCTTACTCATGCGGGTAA
Upstream 100 bases:
>100_bases AAAAAAGCAACTTACTTTTCTTTCTTTGATTCGGCATGGTTATTGCTGCTCTATTCAGGAACAGGCCAGGAGGCAAAACT GAACCATAAGCAAAAAAGCA
Downstream 100 bases:
>100_bases AAGAAATTGCCCGATACGACTATCGCAGGTGGGACGAACCGGCATTCGGATGTTTTCCCCCTGCCAGTCGTTCCGCTGCG TTCCTCCCTGCTGTCCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MTMTSVTTLYGELTGIEFRSLFSNGKTDGCLVTKPNLLKTPYGELIPQYEAEDMGRRSTKPLYFYKNGALKSIALQTSTM LDTPAGVIPAELVTFHKNGRIKRIFPLDGKLSGYWSWQNEFALAKPLSLDSPAGKLNAKMIGVQFYESGALKSITLWPGQ TLTVATPVGEITVRKGLAFYESGEIRSFEPLKKVELRTPIGRVLAYDNEPNGIHGDINSVQLSVDGSIEAFSTVDHTVSV GLSDEKYELFEPGEKNNVCGDERKVSVPMKVRFHENRVIFHDNPKHSFELEKYRFEIKPVIKKAAEPAYSCG
Sequences:
>Translated_312_residues MTMTSVTTLYGELTGIEFRSLFSNGKTDGCLVTKPNLLKTPYGELIPQYEAEDMGRRSTKPLYFYKNGALKSIALQTSTM LDTPAGVIPAELVTFHKNGRIKRIFPLDGKLSGYWSWQNEFALAKPLSLDSPAGKLNAKMIGVQFYESGALKSITLWPGQ TLTVATPVGEITVRKGLAFYESGEIRSFEPLKKVELRTPIGRVLAYDNEPNGIHGDINSVQLSVDGSIEAFSTVDHTVSV GLSDEKYELFEPGEKNNVCGDERKVSVPMKVRFHENRVIFHDNPKHSFELEKYRFEIKPVIKKAAEPAYSCG >Mature_311_residues TMTSVTTLYGELTGIEFRSLFSNGKTDGCLVTKPNLLKTPYGELIPQYEAEDMGRRSTKPLYFYKNGALKSIALQTSTML DTPAGVIPAELVTFHKNGRIKRIFPLDGKLSGYWSWQNEFALAKPLSLDSPAGKLNAKMIGVQFYESGALKSITLWPGQT LTVATPVGEITVRKGLAFYESGEIRSFEPLKKVELRTPIGRVLAYDNEPNGIHGDINSVQLSVDGSIEAFSTVDHTVSVG LSDEKYELFEPGEKNNVCGDERKVSVPMKVRFHENRVIFHDNPKHSFELEKYRFEIKPVIKKAAEPAYSCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34708; Mature: 34577
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMTSVTTLYGELTGIEFRSLFSNGKTDGCLVTKPNLLKTPYGELIPQYEAEDMGRRSTK CCCCCEEHHHHHHCCCCHHHHHCCCCCCCEEEECCCCCCCCHHHHCCCCCHHHCCCCCCC PLYFYKNGALKSIALQTSTMLDTPAGVIPAELVTFHKNGRIKRIFPLDGKLSGYWSWQNE CEEEEECCCEEEEEEEHHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCC FALAKPLSLDSPAGKLNAKMIGVQFYESGALKSITLWPGQTLTVATPVGEITVRKGLAFY EEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEECCEEEE ESGEIRSFEPLKKVELRTPIGRVLAYDNEPNGIHGDINSVQLSVDGSIEAFSTVDHTVSV ECCCCCCCCCHHHEEECCCCCEEEEECCCCCCEECCCCEEEEEECCCCEEEEECCEEEEE GLSDEKYELFEPGEKNNVCGDERKVSVPMKVRFHENRVIFHDNPKHSFELEKYRFEIKPV CCCCCCEEEECCCCCCCCCCCCEEEECEEEEEEECCEEEEECCCCCCEEEEEEEEEEEHH IKKAAEPAYSCG HHHHCCCCCCCC >Mature Secondary Structure TMTSVTTLYGELTGIEFRSLFSNGKTDGCLVTKPNLLKTPYGELIPQYEAEDMGRRSTK CCCCEEHHHHHHCCCCHHHHHCCCCCCCEEEECCCCCCCCHHHHCCCCCHHHCCCCCCC PLYFYKNGALKSIALQTSTMLDTPAGVIPAELVTFHKNGRIKRIFPLDGKLSGYWSWQNE CEEEEECCCEEEEEEEHHHHCCCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCC FALAKPLSLDSPAGKLNAKMIGVQFYESGALKSITLWPGQTLTVATPVGEITVRKGLAFY EEEECCCCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEECCEEEE ESGEIRSFEPLKKVELRTPIGRVLAYDNEPNGIHGDINSVQLSVDGSIEAFSTVDHTVSV ECCCCCCCCCHHHEEECCCCCEEEEECCCCCCEECCCCEEEEEECCCCEEEEECCEEEEE GLSDEKYELFEPGEKNNVCGDERKVSVPMKVRFHENRVIFHDNPKHSFELEKYRFEIKPV CCCCCCEEEECCCCCCCCCCCCEEEECEEEEEEECCEEEEECCCCCCEEEEEEEEEEEHH IKKAAEPAYSCG HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA