Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357360
Identifier: 119357360
GI number: 119357360
Start: 1769621
End: 1770367
Strand: Reverse
Name: 119357360
Synonym: Cpha266_1558
Alternate gene names: NA
Gene position: 1770367-1769621 (Counterclockwise)
Preceding gene: 119357363
Following gene: 119357359
Centisome position: 56.49
GC content: 48.06
Gene sequence:
>747_bases ATGAGCAGTTTTTTTTCGCTCAAAGGGTTGATCGGTGTGGTATTACTGCATTTTTTTCTGGTAGCTTCGGGTTGTTCAGT AAAAACCGCAAGCGCCCCACCGCCGCCGCCGCCGCCGCCATCAGAACCGCTATATTATAAGATTGCAATGCCTGATTTTG AATGGCCGCCGCCTAAAGCTTCCGCAGTAAAGGTTATCCCCGATGAGTTTTTAAGAAGATCCGGAAAGGATTCGCTTCTG TTTCGTGACGTTGATCACATTCTCTCGTCAGCGCTTGATCAGTGCGGTTATTCCGAGTGCAGTTACTATGCTGTTCCGGG CGGGTTTGCCGTCGTAACCCGCATTGAGCAGATAAACAGTGACGGAACTCCTAAACGGGGGGATAGCAGGTGGTCGGTGA AAACACCGCCAATCAGTCCTTTTTCCGATTTCCCTCAATATCTGGAGGTGCTTTTCAAGGGCAATCCTGGCTATTATCGT GTTATCGTTTTTATTTTCACTCCCTATGGATTTACCCAGGGAGCAAAAGGACCGAGCAGGGAAGCTGTTGAAGGGTGGTT CAGCAAAGGGTTTAATGTTCTTCCTGTGGAAGAGGGGAAGCTGCTTTATACGAAAGATCATCGCTGTACCGCGATGATCT ATGAGTTTAAAAAAATATCGAAGCAGGCAATTCAGATCATTCCCGGGCGTCTGACTGGAAAGGCGCATCTTGAGCGTTCA CGCGTATGGTTATTATTACAGCTGTGA
Upstream 100 bases:
>100_bases TCCGTTGTGTTGTTATTTGAAGATTACGTAACTTTCTTTAGGAAAAAGCTCGGGCCTTACCGTTTTTCTGGCTTTTTAAA CCTGAAAGGGGGAGAGAAGA
Downstream 100 bases:
>100_bases TCGGAAAACAAGAATAAGCCAATTTCGGAAAATAAGAATCACCCAGGGTTAGCGTAAAAAACACCCATAGCTCGTAGTTT GAAGGTGCCAACCAAATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MSSFFSLKGLIGVVLLHFFLVASGCSVKTASAPPPPPPPPSEPLYYKIAMPDFEWPPPKASAVKVIPDEFLRRSGKDSLL FRDVDHILSSALDQCGYSECSYYAVPGGFAVVTRIEQINSDGTPKRGDSRWSVKTPPISPFSDFPQYLEVLFKGNPGYYR VIVFIFTPYGFTQGAKGPSREAVEGWFSKGFNVLPVEEGKLLYTKDHRCTAMIYEFKKISKQAIQIIPGRLTGKAHLERS RVWLLLQL
Sequences:
>Translated_248_residues MSSFFSLKGLIGVVLLHFFLVASGCSVKTASAPPPPPPPPSEPLYYKIAMPDFEWPPPKASAVKVIPDEFLRRSGKDSLL FRDVDHILSSALDQCGYSECSYYAVPGGFAVVTRIEQINSDGTPKRGDSRWSVKTPPISPFSDFPQYLEVLFKGNPGYYR VIVFIFTPYGFTQGAKGPSREAVEGWFSKGFNVLPVEEGKLLYTKDHRCTAMIYEFKKISKQAIQIIPGRLTGKAHLERS RVWLLLQL >Mature_247_residues SSFFSLKGLIGVVLLHFFLVASGCSVKTASAPPPPPPPPSEPLYYKIAMPDFEWPPPKASAVKVIPDEFLRRSGKDSLLF RDVDHILSSALDQCGYSECSYYAVPGGFAVVTRIEQINSDGTPKRGDSRWSVKTPPISPFSDFPQYLEVLFKGNPGYYRV IVFIFTPYGFTQGAKGPSREAVEGWFSKGFNVLPVEEGKLLYTKDHRCTAMIYEFKKISKQAIQIIPGRLTGKAHLERSR VWLLLQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27685; Mature: 27554
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFFSLKGLIGVVLLHFFLVASGCSVKTASAPPPPPPPPSEPLYYKIAMPDFEWPPPKA CCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCC SAVKVIPDEFLRRSGKDSLLFRDVDHILSSALDQCGYSECSYYAVPGGFAVVTRIEQINS CEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHCC DGTPKRGDSRWSVKTPPISPFSDFPQYLEVLFKGNPGYYRVIVFIFTPYGFTQGAKGPSR CCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCH EAVEGWFSKGFNVLPVEEGKLLYTKDHRCTAMIYEFKKISKQAIQIIPGRLTGKAHLERS HHHHHHHHCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC RVWLLLQL EEEEEEEC >Mature Secondary Structure SSFFSLKGLIGVVLLHFFLVASGCSVKTASAPPPPPPPPSEPLYYKIAMPDFEWPPPKA CCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCC SAVKVIPDEFLRRSGKDSLLFRDVDHILSSALDQCGYSECSYYAVPGGFAVVTRIEQINS CEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHCC DGTPKRGDSRWSVKTPPISPFSDFPQYLEVLFKGNPGYYRVIVFIFTPYGFTQGAKGPSR CCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCH EAVEGWFSKGFNVLPVEEGKLLYTKDHRCTAMIYEFKKISKQAIQIIPGRLTGKAHLERS HHHHHHHHCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC RVWLLLQL EEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA