Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119357249

Identifier: 119357249

GI number: 119357249

Start: 1643572

End: 1643784

Strand: Direct

Name: 119357249

Synonym: Cpha266_1441

Alternate gene names: NA

Gene position: 1643572-1643784 (Clockwise)

Preceding gene: 119357248

Following gene: 119357257

Centisome position: 52.44

GC content: 50.23

Gene sequence:

>213_bases
ATGAGCCAATGGCCGTCAATTAAAGCCAAGCGTTTACTGGTTGTGCTGTTGCGTCTTGGCTGGGAGGTCAAGCGACAATC
CGGTTCGCACAAAACACTTTCCCGTAATGGCTGGCCTGATTTTGTTTTCGCCTTCCACGATGGCGATGAAATCGGCCCAA
AAATGCTGGCACGCATTGCAAAGCATACGGGTCTTTCACCAGATGACCTGTAA

Upstream 100 bases:

>100_bases
TGTCCAGGGCGGAGGTACTCGCCCTTCGCGTTATTGCTGAACGTCTTGAGCATAACGAAAGTCGCCCCTTTGCCATAAAC
ATTTCCATCCCGGTTATGGC

Downstream 100 bases:

>100_bases
CTGAATTTACAAAGGTTGGCAATGGCAGATACTTTATCGAATGGGAGTGTGGCACTGATTTGTCCGCAGACACTATTGAG
GTGCGATAGACGGTTGCCTG

Product: YcfA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MSQWPSIKAKRLLVVLLRLGWEVKRQSGSHKTLSRNGWPDFVFAFHDGDEIGPKMLARIAKHTGLSPDDL

Sequences:

>Translated_70_residues
MSQWPSIKAKRLLVVLLRLGWEVKRQSGSHKTLSRNGWPDFVFAFHDGDEIGPKMLARIAKHTGLSPDDL
>Mature_69_residues
SQWPSIKAKRLLVVLLRLGWEVKRQSGSHKTLSRNGWPDFVFAFHDGDEIGPKMLARIAKHTGLSPDDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7940; Mature: 7809

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQWPSIKAKRLLVVLLRLGWEVKRQSGSHKTLSRNGWPDFVFAFHDGDEIGPKMLARIA
CCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHH
KHTGLSPDDL
HHCCCCCCCC
>Mature Secondary Structure 
SQWPSIKAKRLLVVLLRLGWEVKRQSGSHKTLSRNGWPDFVFAFHDGDEIGPKMLARIA
CCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHH
KHTGLSPDDL
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA