Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357196
Identifier: 119357196
GI number: 119357196
Start: 1578141
End: 1578383
Strand: Direct
Name: 119357196
Synonym: Cpha266_1387
Alternate gene names: NA
Gene position: 1578141-1578383 (Clockwise)
Preceding gene: 119357195
Following gene: 119357197
Centisome position: 50.36
GC content: 44.44
Gene sequence:
>243_bases ATGCTGAAGGTTAAAAATGTCATTGCAAATGATGACTATACATTATTCGTTGAATTGTCCGATGGACGATCCGGAATTTT CGACGTAAAGCCCTATCTGGAGAAAGGGGTATTCACACAATTACAGGACCTGTCATACTTCAAGCAGGTGAAGCCTTTTT TCTGCGGTATCGTCTGGCCGAACGAGCAGGATTTGAGCGCTGACACCCTGGTTCATGGATTGAAACAGGTTAAAGCCGCA TAG
Upstream 100 bases:
>100_bases AACCGCCTGGATTGAAATTCATCAGGAAGAATTGATGGCTGACTGGAAACTTGCCGTTGAAGGTCAGCAGCCATTTAAAA TCGAACCACTGAGGTAAACC
Downstream 100 bases:
>100_bases GCCTCCCACAGCTCACCGTCTTCAACCTGTTCTGTACAGGTATTTCATCCATGTTGCATGAATCATGAGAAGCCGCTATA TTGCATTGCATATGCAACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MLKVKNVIANDDYTLFVELSDGRSGIFDVKPYLEKGVFTQLQDLSYFKQVKPFFCGIVWPNEQDLSADTLVHGLKQVKAA
Sequences:
>Translated_80_residues MLKVKNVIANDDYTLFVELSDGRSGIFDVKPYLEKGVFTQLQDLSYFKQVKPFFCGIVWPNEQDLSADTLVHGLKQVKAA >Mature_80_residues MLKVKNVIANDDYTLFVELSDGRSGIFDVKPYLEKGVFTQLQDLSYFKQVKPFFCGIVWPNEQDLSADTLVHGLKQVKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9069; Mature: 9069
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKVKNVIANDDYTLFVELSDGRSGIFDVKPYLEKGVFTQLQDLSYFKQVKPFFCGIVWP CCCCCCEECCCCEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCHHHEEEECC NEQDLSADTLVHGLKQVKAA CCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MLKVKNVIANDDYTLFVELSDGRSGIFDVKPYLEKGVFTQLQDLSYFKQVKPFFCGIVWP CCCCCCEECCCCEEEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCHHHEEEECC NEQDLSADTLVHGLKQVKAA CCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA