Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
---|---|
Accession | NC_008639 |
Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119357192
Identifier: 119357192
GI number: 119357192
Start: 1576336
End: 1576866
Strand: Direct
Name: 119357192
Synonym: Cpha266_1383
Alternate gene names: NA
Gene position: 1576336-1576866 (Clockwise)
Preceding gene: 119357191
Following gene: 119357193
Centisome position: 50.3
GC content: 45.76
Gene sequence:
>531_bases ATGGCTCGACCGGCAGTAATCACGGACGAAATGGAATGCTTAGCCAAAAAGATTGTAAAAGAAGCAAATACCGCTCGAGA ACTGAGAGCAGGCTTGAGTATTCTTATCCCGAAAACCTGTGATATCACATACTCTGAAACGGCAGAACTTCTTGGTATTA GTGTGCCTACTGTAGTGCGTATCCATCGAGATATTAGCAATCAAGCTGCCGGAAAAGCAACGCCTAAGGGTAGCTGGGGT GGACGAAGGAGGCAAACGCTTAGTTTAGATGAGGAGGCCCGGTTTCTTGCTGAATGGGTAGAGAAAGCAGAACAAGGTGG CGTACTGGTTGTTCCTCCAATTCATACAGCATTGGAACAACGACTTGGAAAAACAGTTGCAGTGTCTACGGTTTATAGAA TGTTGGCACGTCATGGTTGGCGTAAGGTCGAACCAGATACGTGTCACCCAAAACAAAATATGGAGGAGCAGGAAGAGTTT AAAAAAAACTCCCAGAGATACTGGTACAAGCCGCCAAGCAAAATGTACTGA
Upstream 100 bases:
>100_bases ACACACCTCATTCCGATTTGCAATCAAGATAATCATAATGTATTTTCTGTTTGTGCCAATTATTCTTCATAATTTGCAAA CAAACAGGAGGATACGGAAT
Downstream 100 bases:
>100_bases ATCTACCTTTACGCTTGATGTTTCAGGATGAGGCTCGGTTCGGAAGGATAAGTGATCCTCGAAAATGCTGGGCTCCAAAG CCTTTTCGTCCTATAGTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MARPAVITDEMECLAKKIVKEANTARELRAGLSILIPKTCDITYSETAELLGISVPTVVRIHRDISNQAAGKATPKGSWG GRRRQTLSLDEEARFLAEWVEKAEQGGVLVVPPIHTALEQRLGKTVAVSTVYRMLARHGWRKVEPDTCHPKQNMEEQEEF KKNSQRYWYKPPSKMY
Sequences:
>Translated_176_residues MARPAVITDEMECLAKKIVKEANTARELRAGLSILIPKTCDITYSETAELLGISVPTVVRIHRDISNQAAGKATPKGSWG GRRRQTLSLDEEARFLAEWVEKAEQGGVLVVPPIHTALEQRLGKTVAVSTVYRMLARHGWRKVEPDTCHPKQNMEEQEEF KKNSQRYWYKPPSKMY >Mature_175_residues ARPAVITDEMECLAKKIVKEANTARELRAGLSILIPKTCDITYSETAELLGISVPTVVRIHRDISNQAAGKATPKGSWGG RRRQTLSLDEEARFLAEWVEKAEQGGVLVVPPIHTALEQRLGKTVAVSTVYRMLARHGWRKVEPDTCHPKQNMEEQEEFK KNSQRYWYKPPSKMY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19946; Mature: 19815
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPAVITDEMECLAKKIVKEANTARELRAGLSILIPKTCDITYSETAELLGISVPTVVR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHCCCCHHHHH IHRDISNQAAGKATPKGSWGGRRRQTLSLDEEARFLAEWVEKAEQGGVLVVPPIHTALEQ HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHH RLGKTVAVSTVYRMLARHGWRKVEPDTCHPKQNMEEQEEFKKNSQRYWYKPPSKMY HHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCC >Mature Secondary Structure ARPAVITDEMECLAKKIVKEANTARELRAGLSILIPKTCDITYSETAELLGISVPTVVR CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHCCCCHHHHH IHRDISNQAAGKATPKGSWGGRRRQTLSLDEEARFLAEWVEKAEQGGVLVVPPIHTALEQ HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHH RLGKTVAVSTVYRMLARHGWRKVEPDTCHPKQNMEEQEEFKKNSQRYWYKPPSKMY HHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA