Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357173
Identifier: 119357173
GI number: 119357173
Start: 1557982
End: 1559871
Strand: Direct
Name: 119357173
Synonym: Cpha266_1362
Alternate gene names: NA
Gene position: 1557982-1559871 (Clockwise)
Preceding gene: 119357166
Following gene: 119357175
Centisome position: 49.71
GC content: 47.14
Gene sequence:
>1890_bases ATGACTGAAAGCAAATCGCGCTCACTTCTGATCAATTTTTTAATCTCCATCTTCGCTGTGGCAGGAATGCTGCTATTGCT ATTCTTGTTTCCGGTTGCGGCTCTCTTGCTTAAAGATCTCTTTTTTGAAAATGCGGATCCGAAGCTATATTTCATCTGGG TCTACCGCATATTCACACTCATCATTTCACTCGCATTCATCCTTTTCCTGTTCCGCCAGATCGGCAGACTCGTATCCGTC ATCATCAGGAGAGGGCTCATTGTGGACATAGGAAAAAAGAGCACGATCGTTTCATTGTTCATCACCTTGTTGCTCTTCCC CAAGGCTGCGGTCACAACGCTCACGCAATTCACCACTCTCATCATCAACTTTTTCAGGCAAATCCTGAACGCCTCGTGGG TCGTCATCATGGGCCCTGATGGTACAGAATCCGGTACACTGATCTCTGACTTCATTGCCCTGTTTTCCCATCATTCTCTT GGATTTGTCAACCGGTTAATCAGTGATGTAACGGAAATGATGGATCGCCTGCCATTTACCGAGGCATTCCTTTTTTTCGG TGTCTGGATACTGATCTCCCTCGTCACCGAACAGATAATCGACAGTAAAACGCAGCCGCCCATCAATTTACCCGACATTG ACCCCCGAAGCCGTATCATCCTCTCCTTCATAAAAAAAAACAAGGACAGCATTCTCTTCGGTGCCATTCTCACCTTTGCG CTTTTTCTTTCGGTATCCGCCATGATCGCCGTTCCATACATCTCTCAGAACTCCCAGAAGTTCAAGTACGACTCTGATTA CCTGAAAAAAAGCCTCGATACGTACCTGATAGAAGAGGCCTTTCTGAACGATGAACTCAAAGCGCATGCCGCCGACAGCC TTGCATATGAAAGGCAATTAGGAGGATGGCTAACCGTTTCTGCCGATTCGCTTGAAAAAATCTGCGGACATCCTCTACCT CAAAACATCAGACAGCAATGGACGCAGCATATCTCATCCATCCACGGGTTGCTGAAACAGGCAGTAACCAATGATCTTGG ACAGATCAGAAAAATCGAGGTGTTCAAAAAAGAGATACTCTCACGTCAAAAAAAAGAGAGCCAGATGCTGTCGGAAAATT TTCTGATCACCAGCAACTCCCTGACCAACAACGACGAAGCGAACGAGTATTTCAAAAGGCTCGTCTGGTGGTTTTCGCAA GAATCGGACAACTTGAAAACCGTTCTCGACGAAGCTTACAACAAGCTGAAATACAACAAATCGTATCAGGGATCGATGTT CTCGATCCTCCGCAGCAGCATCGAAAACGAAGCAGCAAAACTGGAGCAATCCAGAACCCTCGACCGACTCTATCTTATGG ATACCGAGAATATGAAACTCGCGCTGATGCAGCAAAAGAACGATATTGAAAGTGCTACATTCAGGCACACATCAATCCCA ATGCCATCAGTGCCAAAAGCGGGAATGAGCTGGGGTGTCTTCGGGCAAATTGCCCAATGGCTTCTTGCCTCAAGATCATA CGAACTCGCCATTCTGACCGGCATGTTCGGATTCGGCCTGTTTGGAGCCTCGATATCCACCCTCATCCGCTACCAGGACA GCGAACAATCCTCGTCGATCGGCTACCGAATCATCATTAAAGGTTTGAGCGCTGCCGTCCTTCTCTTTCTTTCAATCATG GGCGGTACCGCGTTGCTCGGCATCGAAACGTCCAAACCGAACGCATATACTCTTTTCTTTCTATGCCTTATCGGTTCGGT TTTCAGCGATACGGTCTGGGACTGGGCAAAAGGCAAGTTGCCTGGCATTGAAAGCAAACCGGTTACAAAAAAACCTGAAG AAGACAATGGGCTAAAGGAAAATCACGAAAGCGCCGATGAAAACCGGTAG
Upstream 100 bases:
>100_bases CCGCTTTCCCGACAGCTTTTCTGAAATACCGTTACCATCGGAAGCCCACGACACCCGGTGCGGAGTATGTTTTCTTCAGT TCAAACAAAACACTCTGGTC
Downstream 100 bases:
>100_bases AGAATAACACGCGCCGGAGACAAGCACTCGATACTGTTGTAATATTGCGATAATATCAACCATCGACACATGTGTTGCTG TACATCGAGCGCTGGCTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 629; Mature: 628
Protein sequence:
>629_residues MTESKSRSLLINFLISIFAVAGMLLLLFLFPVAALLLKDLFFENADPKLYFIWVYRIFTLIISLAFILFLFRQIGRLVSV IIRRGLIVDIGKKSTIVSLFITLLLFPKAAVTTLTQFTTLIINFFRQILNASWVVIMGPDGTESGTLISDFIALFSHHSL GFVNRLISDVTEMMDRLPFTEAFLFFGVWILISLVTEQIIDSKTQPPINLPDIDPRSRIILSFIKKNKDSILFGAILTFA LFLSVSAMIAVPYISQNSQKFKYDSDYLKKSLDTYLIEEAFLNDELKAHAADSLAYERQLGGWLTVSADSLEKICGHPLP QNIRQQWTQHISSIHGLLKQAVTNDLGQIRKIEVFKKEILSRQKKESQMLSENFLITSNSLTNNDEANEYFKRLVWWFSQ ESDNLKTVLDEAYNKLKYNKSYQGSMFSILRSSIENEAAKLEQSRTLDRLYLMDTENMKLALMQQKNDIESATFRHTSIP MPSVPKAGMSWGVFGQIAQWLLASRSYELAILTGMFGFGLFGASISTLIRYQDSEQSSSIGYRIIIKGLSAAVLLFLSIM GGTALLGIETSKPNAYTLFFLCLIGSVFSDTVWDWAKGKLPGIESKPVTKKPEEDNGLKENHESADENR
Sequences:
>Translated_629_residues MTESKSRSLLINFLISIFAVAGMLLLLFLFPVAALLLKDLFFENADPKLYFIWVYRIFTLIISLAFILFLFRQIGRLVSV IIRRGLIVDIGKKSTIVSLFITLLLFPKAAVTTLTQFTTLIINFFRQILNASWVVIMGPDGTESGTLISDFIALFSHHSL GFVNRLISDVTEMMDRLPFTEAFLFFGVWILISLVTEQIIDSKTQPPINLPDIDPRSRIILSFIKKNKDSILFGAILTFA LFLSVSAMIAVPYISQNSQKFKYDSDYLKKSLDTYLIEEAFLNDELKAHAADSLAYERQLGGWLTVSADSLEKICGHPLP QNIRQQWTQHISSIHGLLKQAVTNDLGQIRKIEVFKKEILSRQKKESQMLSENFLITSNSLTNNDEANEYFKRLVWWFSQ ESDNLKTVLDEAYNKLKYNKSYQGSMFSILRSSIENEAAKLEQSRTLDRLYLMDTENMKLALMQQKNDIESATFRHTSIP MPSVPKAGMSWGVFGQIAQWLLASRSYELAILTGMFGFGLFGASISTLIRYQDSEQSSSIGYRIIIKGLSAAVLLFLSIM GGTALLGIETSKPNAYTLFFLCLIGSVFSDTVWDWAKGKLPGIESKPVTKKPEEDNGLKENHESADENR >Mature_628_residues TESKSRSLLINFLISIFAVAGMLLLLFLFPVAALLLKDLFFENADPKLYFIWVYRIFTLIISLAFILFLFRQIGRLVSVI IRRGLIVDIGKKSTIVSLFITLLLFPKAAVTTLTQFTTLIINFFRQILNASWVVIMGPDGTESGTLISDFIALFSHHSLG FVNRLISDVTEMMDRLPFTEAFLFFGVWILISLVTEQIIDSKTQPPINLPDIDPRSRIILSFIKKNKDSILFGAILTFAL FLSVSAMIAVPYISQNSQKFKYDSDYLKKSLDTYLIEEAFLNDELKAHAADSLAYERQLGGWLTVSADSLEKICGHPLPQ NIRQQWTQHISSIHGLLKQAVTNDLGQIRKIEVFKKEILSRQKKESQMLSENFLITSNSLTNNDEANEYFKRLVWWFSQE SDNLKTVLDEAYNKLKYNKSYQGSMFSILRSSIENEAAKLEQSRTLDRLYLMDTENMKLALMQQKNDIESATFRHTSIPM PSVPKAGMSWGVFGQIAQWLLASRSYELAILTGMFGFGLFGASISTLIRYQDSEQSSSIGYRIIIKGLSAAVLLFLSIMG GTALLGIETSKPNAYTLFFLCLIGSVFSDTVWDWAKGKLPGIESKPVTKKPEEDNGLKENHESADENR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71158; Mature: 71026
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESKSRSLLINFLISIFAVAGMLLLLFLFPVAALLLKDLFFENADPKLYFIWVYRIFTL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH IISLAFILFLFRQIGRLVSVIIRRGLIVDIGKKSTIVSLFITLLLFPKAAVTTLTQFTTL HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHH IINFFRQILNASWVVIMGPDGTESGTLISDFIALFSHHSLGFVNRLISDVTEMMDRLPFT HHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHH EAFLFFGVWILISLVTEQIIDSKTQPPINLPDIDPRSRIILSFIKKNKDSILFGAILTFA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH LFLSVSAMIAVPYISQNSQKFKYDSDYLKKSLDTYLIEEAFLNDELKAHAADSLAYERQL HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHC GGWLTVSADSLEKICGHPLPQNIRQQWTQHISSIHGLLKQAVTNDLGQIRKIEVFKKEIL CCEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRQKKESQMLSENFLITSNSLTNNDEANEYFKRLVWWFSQESDNLKTVLDEAYNKLKYNK HHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC SYQGSMFSILRSSIENEAAKLEQSRTLDRLYLMDTENMKLALMQQKNDIESATFRHTSIP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEHHHCCCHHHHHEECCCCC MPSVPKAGMSWGVFGQIAQWLLASRSYELAILTGMFGFGLFGASISTLIRYQDSEQSSSI CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GYRIIIKGLSAAVLLFLSIMGGTALLGIETSKPNAYTLFFLCLIGSVFSDTVWDWAKGKL CHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC PGIESKPVTKKPEEDNGLKENHESADENR CCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TESKSRSLLINFLISIFAVAGMLLLLFLFPVAALLLKDLFFENADPKLYFIWVYRIFTL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH IISLAFILFLFRQIGRLVSVIIRRGLIVDIGKKSTIVSLFITLLLFPKAAVTTLTQFTTL HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHH IINFFRQILNASWVVIMGPDGTESGTLISDFIALFSHHSLGFVNRLISDVTEMMDRLPFT HHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHH EAFLFFGVWILISLVTEQIIDSKTQPPINLPDIDPRSRIILSFIKKNKDSILFGAILTFA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH LFLSVSAMIAVPYISQNSQKFKYDSDYLKKSLDTYLIEEAFLNDELKAHAADSLAYERQL HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHC GGWLTVSADSLEKICGHPLPQNIRQQWTQHISSIHGLLKQAVTNDLGQIRKIEVFKKEIL CCEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRQKKESQMLSENFLITSNSLTNNDEANEYFKRLVWWFSQESDNLKTVLDEAYNKLKYNK HHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC SYQGSMFSILRSSIENEAAKLEQSRTLDRLYLMDTENMKLALMQQKNDIESATFRHTSIP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEHHHCCCHHHHHEECCCCC MPSVPKAGMSWGVFGQIAQWLLASRSYELAILTGMFGFGLFGASISTLIRYQDSEQSSSI CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GYRIIIKGLSAAVLLFLSIMGGTALLGIETSKPNAYTLFFLCLIGSVFSDTVWDWAKGKL CHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC PGIESKPVTKKPEEDNGLKENHESADENR CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA