Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is ccp [H]
Identifier: 119357164
GI number: 119357164
Start: 1546382
End: 1547437
Strand: Direct
Name: ccp [H]
Synonym: Cpha266_1353
Alternate gene names: 119357164
Gene position: 1546382-1547437 (Clockwise)
Preceding gene: 119357160
Following gene: 119357166
Centisome position: 49.34
GC content: 50.95
Gene sequence:
>1056_bases ATGAAAATTCACTCCATCGCTGCAGGCGTACTGGTTATCGGAGTAATGGCTTCCTGCGCGAAAGCCCCTCCCCCCGTAAA TGAACCGCTGCCGGTTGAGCAACCTAAAACCCCGGTGCTTCAACCAAAAACAAACGAACCCATCCAGCCTGTTGAGGATG CAAAAGTCACCGATCCTGCCATGGTGGAACTTGGAAAACAGCTTTTCTTTGATCCCCGACTCTCAAAATCCGGATTTATC TCCTGTAACTCGTGCCATAATCTCAGCATGGGTGGCAGTGACAACCTGAAATCCTCAATCGGCCACAAATGGAACAAAGG CCCGATCAACTCTCCAACCGTGCTGAACTCCTCCATGAACCTCGCGCAATTCTGGGACGGCAGAGCAAAAGACCTCAAGG AGCAGGCGGGAGGGCCTATAGCCAACCCCGGCGAAATGGCATTTACCCACGAACTTGCCATTGAAGTGCTCCAGTCCATT CCTGGGTATGCAGAGGAATTCAAAAAGGTTTTTGGCGTCGACAAGATCGATATCGATCAGATCACTCGTGCCATTGCCGC ATTTGAGGAAACGCTGGTTACGCCGAACTCCCGATTCGACAAATGGCTTAAAGGTGACGATGCCGCCATCACTCAGAACG AACGTGAAGGATATGAGCTGTTTAAATCAAGCGGATGCACAGCCTGCCACAACGGCCCGGCCCTTGGCGGCAACTCCTAT CAGAAAATGGGTGTCGTTGAACCTTACAAGGGAAGCACCAATGCCGTAGGTCGATCCGCCGTTACAGGCAAAGATGCTGA CCGCTTCAATTTCAAAGTACCGACACTGCGCAATATTGAACTGACCTATCCCTACTTCCATGACGGGGAAGCGGCAACCA TGGCAAAAGCCGTTGAAGTAATGGGCCAGATTCAGTTGGGAAAAACATTTACTCCTGATGAAAACGCAAAAATCGTCGCC TTCCTGAAAAGCCTGACAGGCGATCAACCAAAATTCGTACTGCCGCTTCTTCCGCCATCATCTGATACAACGCCACCACC GGCGCCATTCAAATAA
Upstream 100 bases:
>100_bases TATATGCGGATAAAACCAATCCAATCCGCAATACTCATATGTCATACAACACAAGTGATTTCGTTGATGTGTCAGCCTTT TAAACTAAAAGAGCATAATC
Downstream 100 bases:
>100_bases TCAATATTCTCTTCACTGGCCGGATCGCAATTGCATCAAACCTCGGCCAGTGAAGAGAAAAATCCCTCCCTGACGTCGGG ATGACAGAGACTGGTGCTCA
Product: cytochrome-c peroxidase
Products: NA
Alternate protein names: Cytochrome c peroxidase [H]
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MKIHSIAAGVLVIGVMASCAKAPPPVNEPLPVEQPKTPVLQPKTNEPIQPVEDAKVTDPAMVELGKQLFFDPRLSKSGFI SCNSCHNLSMGGSDNLKSSIGHKWNKGPINSPTVLNSSMNLAQFWDGRAKDLKEQAGGPIANPGEMAFTHELAIEVLQSI PGYAEEFKKVFGVDKIDIDQITRAIAAFEETLVTPNSRFDKWLKGDDAAITQNEREGYELFKSSGCTACHNGPALGGNSY QKMGVVEPYKGSTNAVGRSAVTGKDADRFNFKVPTLRNIELTYPYFHDGEAATMAKAVEVMGQIQLGKTFTPDENAKIVA FLKSLTGDQPKFVLPLLPPSSDTTPPPAPFK
Sequences:
>Translated_351_residues MKIHSIAAGVLVIGVMASCAKAPPPVNEPLPVEQPKTPVLQPKTNEPIQPVEDAKVTDPAMVELGKQLFFDPRLSKSGFI SCNSCHNLSMGGSDNLKSSIGHKWNKGPINSPTVLNSSMNLAQFWDGRAKDLKEQAGGPIANPGEMAFTHELAIEVLQSI PGYAEEFKKVFGVDKIDIDQITRAIAAFEETLVTPNSRFDKWLKGDDAAITQNEREGYELFKSSGCTACHNGPALGGNSY QKMGVVEPYKGSTNAVGRSAVTGKDADRFNFKVPTLRNIELTYPYFHDGEAATMAKAVEVMGQIQLGKTFTPDENAKIVA FLKSLTGDQPKFVLPLLPPSSDTTPPPAPFK >Mature_351_residues MKIHSIAAGVLVIGVMASCAKAPPPVNEPLPVEQPKTPVLQPKTNEPIQPVEDAKVTDPAMVELGKQLFFDPRLSKSGFI SCNSCHNLSMGGSDNLKSSIGHKWNKGPINSPTVLNSSMNLAQFWDGRAKDLKEQAGGPIANPGEMAFTHELAIEVLQSI PGYAEEFKKVFGVDKIDIDQITRAIAAFEETLVTPNSRFDKWLKGDDAAITQNEREGYELFKSSGCTACHNGPALGGNSY QKMGVVEPYKGSTNAVGRSAVTGKDADRFNFKVPTLRNIELTYPYFHDGEAATMAKAVEVMGQIQLGKTFTPDENAKIVA FLKSLTGDQPKFVLPLLPPSSDTTPPPAPFK
Specific function: Unknown
COG id: COG1858
COG function: function code P; Cytochrome c peroxidase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789935, Length=287, Percent_Identity=45.993031358885, Blast_Score=243, Evalue=2e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 - InterPro: IPR004852 [H]
Pfam domain/function: PF03150 CCP_MauG; PF00034 Cytochrom_C [H]
EC number: =1.11.1.5 [H]
Molecular weight: Translated: 37901; Mature: 37901
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIHSIAAGVLVIGVMASCAKAPPPVNEPLPVEQPKTPVLQPKTNEPIQPVEDAKVTDPA CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH MVELGKQLFFDPRLSKSGFISCNSCHNLSMGGSDNLKSSIGHKWNKGPINSPTVLNSSMN HHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEECCCCC LAQFWDGRAKDLKEQAGGPIANPGEMAFTHELAIEVLQSIPGYAEEFKKVFGVDKIDIDQ HHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHH ITRAIAAFEETLVTPNSRFDKWLKGDDAAITQNEREGYELFKSSGCTACHNGPALGGNSY HHHHHHHHHHHHCCCCHHHHHHHCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCH QKMGVVEPYKGSTNAVGRSAVTGKDADRFNFKVPTLRNIELTYPYFHDGEAATMAKAVEV HHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEECEEEECCEEECCCHHHHHHHHHH MGQIQLGKTFTPDENAKIVAFLKSLTGDQPKFVLPLLPPSSDTTPPPAPFK HHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MKIHSIAAGVLVIGVMASCAKAPPPVNEPLPVEQPKTPVLQPKTNEPIQPVEDAKVTDPA CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH MVELGKQLFFDPRLSKSGFISCNSCHNLSMGGSDNLKSSIGHKWNKGPINSPTVLNSSMN HHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEECCCCC LAQFWDGRAKDLKEQAGGPIANPGEMAFTHELAIEVLQSIPGYAEEFKKVFGVDKIDIDQ HHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHH ITRAIAAFEETLVTPNSRFDKWLKGDDAAITQNEREGYELFKSSGCTACHNGPALGGNSY HHHHHHHHHHHHCCCCHHHHHHHCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCH QKMGVVEPYKGSTNAVGRSAVTGKDADRFNFKVPTLRNIELTYPYFHDGEAATMAKAVEV HHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEECEEEECCEEECCCHHHHHHHHHH MGQIQLGKTFTPDENAKIVAFLKSLTGDQPKFVLPLLPPSSDTTPPPAPFK HHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12700255; 8163487 [H]