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The map label for this gene is nlpC [H]

Identifier: 119357155

GI number: 119357155

Start: 1539316

End: 1539939

Strand: Direct

Name: nlpC [H]

Synonym: Cpha266_1344

Alternate gene names: 119357155

Gene position: 1539316-1539939 (Clockwise)

Preceding gene: 119357153

Following gene: 119357156

Centisome position: 49.12

GC content: 51.28

Gene sequence:

>624_bases
ATGCAGAATCAAGGAATGCCGCAGCCTGCTCGCCATGGCTCAACAGCGCCGACGCGATATGTTCGTCTGTTTTTCTTTTC
TCTGATATTCTTAGCCGCAACGTTCGCCACTACACCCAAAGCTTTTGCCGAACCTTCCTTTTCCCCCGGAAACCCGATAG
AAAAAACGAGCCACCTTTCCACCCTGCAACAATCGGCCTGTTCCATGGAGTCGCTCTTCAGGGAAGCGCGACAGTATTTC
GGCATACGCTATCGATGGGGCGGCCAGACGCCTGCCGGGTTTGACTGTTCCGGGTTTGTGCGCTACATGTTCGGCAAAGT
ATTCCAAATGCATCTTCCCCGATCATCACGCGAAATGGCAGCAATTGGCAGCAAAGTTAATCGCAGCGAGCTGCAGCCCG
GAGATCTTGTCTTTTTCGGAACCAAAGGCGGAAGAATCAACCACGTAGGAATCTTTGTCGGTAACGACACATTTATGCAC
TCCTCGCTCTCAAAAGGCATTACCGAAGACAAACTCCAGCAGAACTACTACGATAAACGATTTATTGGAGGCGTCAGGCT
GCCGGAACTCCCCAATATCATGGATAACTCCCTCATGCCCTCCCAACAAGAACAAGGCAGTTGA

Upstream 100 bases:

>100_bases
TTTAAACTTACTGTTGGAATTCACTGACAAAAAGGCTTAAGTTGAACCTTTTATGAAATAAAGGCAAAAGGCATCCAAAA
AAACCGAATGTAATCCCCTT

Downstream 100 bases:

>100_bases
CGAGAGAATATCATCCTCTCATCGTAACCCTGCACCAACACAGCCTGTAACCCGGTTGTCTTTCTCTGTTATCCGGTTTT
CGTCCACAGCCCTCGCACAC

Product: NLP/P60 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MQNQGMPQPARHGSTAPTRYVRLFFFSLIFLAATFATTPKAFAEPSFSPGNPIEKTSHLSTLQQSACSMESLFREARQYF
GIRYRWGGQTPAGFDCSGFVRYMFGKVFQMHLPRSSREMAAIGSKVNRSELQPGDLVFFGTKGGRINHVGIFVGNDTFMH
SSLSKGITEDKLQQNYYDKRFIGGVRLPELPNIMDNSLMPSQQEQGS

Sequences:

>Translated_207_residues
MQNQGMPQPARHGSTAPTRYVRLFFFSLIFLAATFATTPKAFAEPSFSPGNPIEKTSHLSTLQQSACSMESLFREARQYF
GIRYRWGGQTPAGFDCSGFVRYMFGKVFQMHLPRSSREMAAIGSKVNRSELQPGDLVFFGTKGGRINHVGIFVGNDTFMH
SSLSKGITEDKLQQNYYDKRFIGGVRLPELPNIMDNSLMPSQQEQGS
>Mature_207_residues
MQNQGMPQPARHGSTAPTRYVRLFFFSLIFLAATFATTPKAFAEPSFSPGNPIEKTSHLSTLQQSACSMESLFREARQYF
GIRYRWGGQTPAGFDCSGFVRYMFGKVFQMHLPRSSREMAAIGSKVNRSELQPGDLVFFGTKGGRINHVGIFVGNDTFMH
SSLSKGITEDKLQQNYYDKRFIGGVRLPELPNIMDNSLMPSQQEQGS

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=137, Percent_Identity=40.1459854014599, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI1788001, Length=127, Percent_Identity=39.3700787401575, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1787944, Length=115, Percent_Identity=40, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1786421, Length=147, Percent_Identity=29.2517006802721, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 23183; Mature: 23183

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNQGMPQPARHGSTAPTRYVRLFFFSLIFLAATFATTPKAFAEPSFSPGNPIEKTSHLS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHH
TLQQSACSMESLFREARQYFGIRYRWGGQTPAGFDCSGFVRYMFGKVFQMHLPRSSREMA
HHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
AIGSKVNRSELQPGDLVFFGTKGGRINHVGIFVGNDTFMHSSLSKGITEDKLQQNYYDKR
HHHCCCCHHHCCCCCEEEEECCCCCEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHH
FIGGVRLPELPNIMDNSLMPSQQEQGS
HHCCCCCCCCCCHHHCCCCCCHHCCCC
>Mature Secondary Structure
MQNQGMPQPARHGSTAPTRYVRLFFFSLIFLAATFATTPKAFAEPSFSPGNPIEKTSHLS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHH
TLQQSACSMESLFREARQYFGIRYRWGGQTPAGFDCSGFVRYMFGKVFQMHLPRSSREMA
HHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
AIGSKVNRSELQPGDLVFFGTKGGRINHVGIFVGNDTFMHSSLSKGITEDKLQQNYYDKR
HHHCCCCHHHCCCCCEEEEECCCCCEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHH
FIGGVRLPELPNIMDNSLMPSQQEQGS
HHCCCCCCCCCCHHHCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]