Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357152
Identifier: 119357152
GI number: 119357152
Start: 1536148
End: 1537719
Strand: Direct
Name: 119357152
Synonym: Cpha266_1341
Alternate gene names: NA
Gene position: 1536148-1537719 (Clockwise)
Preceding gene: 119357149
Following gene: 119357153
Centisome position: 49.02
GC content: 46.88
Gene sequence:
>1572_bases ATGGATAATACTCCGAATATACAGTATTTCAAACTAATGAGTGAGGGAGATCCGCACGCCCTTGAAGAGTGGTTTTCTTC GACCTGCGGACTCAGAAAAGAGGGCGAAAGAAAAGAAAAAAGCCACTATTACGATACCTTCGAGTGGCAGCTCTACAACG CGGGATTGAGTGCAATTCAAAAAAACAGCCGCCTTCATCTCATCGACATGGAGAGCGGACAGGAAACATTCCGGCTTCAT TTCAGAAAAAATCCCCTCCATTTTTCTCCCGCAGGCATTGAGCCTTGTACGCTGAAGGAAAGCCTTCTCTCTTGTACCAA TCACAGAGCCCTGCTTCGACTCTGCACTATAGAAACAGAAATCAGCGCCTTTCGTGTTCTTGACGAGCACGAAAAAACAA TCGGGTTTATCCAGACTGAGCATGCCATACTCCTCAATAACAACGTACGGGAGCACATCGGGAACTTCCTGACTATCAGA CCCCTTAAAGGTTATCAGGAAGTTATGCAAAACATTGCAGATCAACTCCCTCTGGAAGCTGTCGAACACAACGAATCGGC TTTCAAAAATCTCTTCCGGTTAAATATGGCAGCAGCCGGACTTACCGTCAACGGCTACACCTCGGACCTTCGCCTCTCCC TGCGGGCCGCAGACCCGATAATAAAATCGGCATGCGCTATCTTCAAGAGCACGCTTGCCGTCATGCGAATGAACGAGCCG GGCATAATCGATAATATCGACAGCGAATTTCTGCATGACTACCGCGTCGCCCTCAGAAAAACCCGTTCGCTGCTTACCCT TTTGAAAGAGATCTTTCCGCCTGAAATTCTGGTATTGTACCAGCAGGAGTTCAAAACCATTGGAAAAAAAACCAACGCTT TGCGTGACTGCGATGTCTACCTCCTGAAAAAAGAGTTTTACATGCAGAATCTGCCCGAAAGCCTGCGGCACCATCTTGAA CGTTTTTTCATTGAACTTGAAAACACAAGAGGGAGTGAACAGAAAAGGCTTAAAACATATCTGCGAGGATCAGCGTATGA AAAGATGGTATCTGACTGGAAACACCTGCTGCAAAACGAACTTGTTCTTTCCGGTGCCAATAACCTCAAGGCAAACGAAT CAACCGGATACGTAGCGGAAAAAGCCATAAAAAAAGCCATGAAAAAAGTGATTCGTCACGGACGAAACATATCCGCTGAC ACGCCAGACCGGGAGATCCATGGACTGAGAATTGACTGCAAAAAACTCCGCTACCTCCTTGAATTTTTCTCTTCGCTCTT TAAACCTGAAACCATCGCCCCTTTGCTGAAACAGTTAAAAGCACTCCAGGAAAACCTGGGCGCCTTTGTTGATCTTGCCG TTCAGCAGCACTATCTTGAACAACACCTTGCTTCGCTGAAAACCACAACGAGAGATACGGATCTTGCCGCGGCACTGGGA GGACTTATCGCCATTCTCGCCCGAAGACAGGAAAAAGCCCGTAAAGCATTTCACGATACCTTCAGGCATTTCGACAGCGA TGAGACCGAAGCGCTGTTTACGCAACTTCTTCATTCAGAAATGATATCATGA
Upstream 100 bases:
>100_bases TATAGTCGCTTTTACAGAAAAAATCAGGAAGTTCTTCATATATTTGCTGTTATAAGAACGTTGCCTGAAGGCGCACTATC ATGTTCCGCTTGGGATCCTT
Downstream 100 bases:
>100_bases ACACTATTGCACTATACAGTATCAAAGGGGGGGTGGGTAAAACAGCGTCAGCGGTCAACCTTTCCTATATAGCCTCAAAA CTTTCGCCTCCCGTTCTCAT
Product: CHAD domain-containing protein
Products: NA
Alternate protein names: CHAD Domain-Containing Protein; Adenylate Cyclase; Chad Domain Containing Protein; Phosphohistidine Phosphatase SixA; CHAD Domain Family
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MDNTPNIQYFKLMSEGDPHALEEWFSSTCGLRKEGERKEKSHYYDTFEWQLYNAGLSAIQKNSRLHLIDMESGQETFRLH FRKNPLHFSPAGIEPCTLKESLLSCTNHRALLRLCTIETEISAFRVLDEHEKTIGFIQTEHAILLNNNVREHIGNFLTIR PLKGYQEVMQNIADQLPLEAVEHNESAFKNLFRLNMAAAGLTVNGYTSDLRLSLRAADPIIKSACAIFKSTLAVMRMNEP GIIDNIDSEFLHDYRVALRKTRSLLTLLKEIFPPEILVLYQQEFKTIGKKTNALRDCDVYLLKKEFYMQNLPESLRHHLE RFFIELENTRGSEQKRLKTYLRGSAYEKMVSDWKHLLQNELVLSGANNLKANESTGYVAEKAIKKAMKKVIRHGRNISAD TPDREIHGLRIDCKKLRYLLEFFSSLFKPETIAPLLKQLKALQENLGAFVDLAVQQHYLEQHLASLKTTTRDTDLAAALG GLIAILARRQEKARKAFHDTFRHFDSDETEALFTQLLHSEMIS
Sequences:
>Translated_523_residues MDNTPNIQYFKLMSEGDPHALEEWFSSTCGLRKEGERKEKSHYYDTFEWQLYNAGLSAIQKNSRLHLIDMESGQETFRLH FRKNPLHFSPAGIEPCTLKESLLSCTNHRALLRLCTIETEISAFRVLDEHEKTIGFIQTEHAILLNNNVREHIGNFLTIR PLKGYQEVMQNIADQLPLEAVEHNESAFKNLFRLNMAAAGLTVNGYTSDLRLSLRAADPIIKSACAIFKSTLAVMRMNEP GIIDNIDSEFLHDYRVALRKTRSLLTLLKEIFPPEILVLYQQEFKTIGKKTNALRDCDVYLLKKEFYMQNLPESLRHHLE RFFIELENTRGSEQKRLKTYLRGSAYEKMVSDWKHLLQNELVLSGANNLKANESTGYVAEKAIKKAMKKVIRHGRNISAD TPDREIHGLRIDCKKLRYLLEFFSSLFKPETIAPLLKQLKALQENLGAFVDLAVQQHYLEQHLASLKTTTRDTDLAAALG GLIAILARRQEKARKAFHDTFRHFDSDETEALFTQLLHSEMIS >Mature_523_residues MDNTPNIQYFKLMSEGDPHALEEWFSSTCGLRKEGERKEKSHYYDTFEWQLYNAGLSAIQKNSRLHLIDMESGQETFRLH FRKNPLHFSPAGIEPCTLKESLLSCTNHRALLRLCTIETEISAFRVLDEHEKTIGFIQTEHAILLNNNVREHIGNFLTIR PLKGYQEVMQNIADQLPLEAVEHNESAFKNLFRLNMAAAGLTVNGYTSDLRLSLRAADPIIKSACAIFKSTLAVMRMNEP GIIDNIDSEFLHDYRVALRKTRSLLTLLKEIFPPEILVLYQQEFKTIGKKTNALRDCDVYLLKKEFYMQNLPESLRHHLE RFFIELENTRGSEQKRLKTYLRGSAYEKMVSDWKHLLQNELVLSGANNLKANESTGYVAEKAIKKAMKKVIRHGRNISAD TPDREIHGLRIDCKKLRYLLEFFSSLFKPETIAPLLKQLKALQENLGAFVDLAVQQHYLEQHLASLKTTTRDTDLAAALG GLIAILARRQEKARKAFHDTFRHFDSDETEALFTQLLHSEMIS
Specific function: Unknown
COG id: COG5607
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60210; Mature: 60210
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNTPNIQYFKLMSEGDPHALEEWFSSTCGLRKEGERKEKSHYYDTFEWQLYNAGLSAIQ CCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEHHHHHHHH KNSRLHLIDMESGQETFRLHFRKNPLHFSPAGIEPCTLKESLLSCTNHRALLRLCTIETE CCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHH ISAFRVLDEHEKTIGFIQTEHAILLNNNVREHIGNFLTIRPLKGYQEVMQNIADQLPLEA HHHHHHHHHHHHHHCEEEECCEEEECCCHHHHCCCEEEEEECHHHHHHHHHHHHHCCHHH VEHNESAFKNLFRLNMAAAGLTVNGYTSDLRLSLRAADPIIKSACAIFKSTLAVMRMNEP HHCCHHHHHHHHHHHHHHCCCEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC GIIDNIDSEFLHDYRVALRKTRSLLTLLKEIFPPEILVLYQQEFKTIGKKTNALRDCDVY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH LLKKEFYMQNLPESLRHHLERFFIELENTRGSEQKRLKTYLRGSAYEKMVSDWKHLLQNE HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH LVLSGANNLKANESTGYVAEKAIKKAMKKVIRHGRNISADTPDREIHGLRIDCKKLRYLL HEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECHHHHHHHH EFFSSLFKPETIAPLLKQLKALQENLGAFVDLAVQQHYLEQHLASLKTTTRDTDLAAALG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GLIAILARRQEKARKAFHDTFRHFDSDETEALFTQLLHSEMIS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MDNTPNIQYFKLMSEGDPHALEEWFSSTCGLRKEGERKEKSHYYDTFEWQLYNAGLSAIQ CCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEEHHHHHHHH KNSRLHLIDMESGQETFRLHFRKNPLHFSPAGIEPCTLKESLLSCTNHRALLRLCTIETE CCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHH ISAFRVLDEHEKTIGFIQTEHAILLNNNVREHIGNFLTIRPLKGYQEVMQNIADQLPLEA HHHHHHHHHHHHHHCEEEECCEEEECCCHHHHCCCEEEEEECHHHHHHHHHHHHHCCHHH VEHNESAFKNLFRLNMAAAGLTVNGYTSDLRLSLRAADPIIKSACAIFKSTLAVMRMNEP HHCCHHHHHHHHHHHHHHCCCEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC GIIDNIDSEFLHDYRVALRKTRSLLTLLKEIFPPEILVLYQQEFKTIGKKTNALRDCDVY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH LLKKEFYMQNLPESLRHHLERFFIELENTRGSEQKRLKTYLRGSAYEKMVSDWKHLLQNE HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH LVLSGANNLKANESTGYVAEKAIKKAMKKVIRHGRNISADTPDREIHGLRIDCKKLRYLL HEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECHHHHHHHH EFFSSLFKPETIAPLLKQLKALQENLGAFVDLAVQQHYLEQHLASLKTTTRDTDLAAALG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GLIAILARRQEKARKAFHDTFRHFDSDETEALFTQLLHSEMIS HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA