Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357122
Identifier: 119357122
GI number: 119357122
Start: 1502704
End: 1505247
Strand: Direct
Name: 119357122
Synonym: Cpha266_1311
Alternate gene names: NA
Gene position: 1502704-1505247 (Clockwise)
Preceding gene: 119357119
Following gene: 119357125
Centisome position: 47.95
GC content: 53.11
Gene sequence:
>2544_bases ATGCAGACACCTGAAGAACATCTCGGCTCGTTTTATCTCGGTGCCGAATACGACATCCCGACAGGTAAACTCGTTGATCG TCCCGTTCACTTTGACGCGAGGGACCTCACTACGCATGCGGTTTGTGTGGGTATGACCGGAAGCGGAAAAACGGGGCTCT GCATCGGTCTGCTTGAAGAAGCAGCGATCGATAAAGTGCCGACACTCATTATCGATCCCAAAGGAGATATGACAAACCTG CTCCTGCAGTTTCCCGATCTCCTGCCGGAAAACTTTCTGCCCTGGATCAATGAAGATGATGCTCGTCGAAAAGGAAAAAG CGTAGAGGATCTTGCCGCATCGACGGCGGAGGTTTGGAAAAAAGGGCTTGCCGACTGGGGAATCGACCCTGGGAGAATAA GAATGTTGCAGGATTCGGCTGATTTTACCATCTATACGCCGGGGTCGGATGCCGGGGTGCCGGTCAACATTTCAGGCAGC CTTCAGGCACCGGGAGTGGATTTTGACGAACATGCCGAAGCCATCAGGGAGCGCATCAACGGCACCGTTACCGCCCTGCT CGGACTGGCAGGCATCAATGCCGACCCGGTACGCAGCCGTGAAGCTATTCTTCTTGCTGGCATATTTGAGTATTTCTGGC GAAAAAACGAAAATCTCGACCTTGCCGGACTTATCGGATCAATACAGAAGCCTCCCGTACGACAGGTAGGCGTTTTTGAT ATCGATACATTTTTTCCCGAAAAGGAGCGGTTCGGGCTGGCCATGTCGTTCAATACCATAATTGCCTCGCCGACTTTCCA GAGCTGGCTGACAGGTGAACCTCTCGATGTTGACCGGATGCTGCATACCCGCGAAGGAAAACCAAAGCACAGTATTTTTT ATCTTGCTCACCTTTCAGACAGCGAACGGATGTTTTTCGTCACGCTCCTGCTTGAAAACGTACTCACCTGGGTGAGGGCC CAGACCGGAACGTCCAGTTTGCGCGCGCTGCTCTACTTCGATGAGGTGTTCGGCTTTCTGCCACCAGTAGCCGAACCCTC TTCGAAACGCCCGCTGCTTACCCTGCTCAAACAGGCGAGAGCTTCAGGGCTCGGTTGCGTGCTGGTAACGCAGAATCCGG TTGATCTCGACTACAAAGGACTTACCAATACCGGAACATGGTTTATCGGCAAACTCCAGGCTGAACGTGACAAGGAGCGC GTGCTTGAAGGATTGAAAAGCGCCATCAGCGAAGCTGGCGGAGAAAACGGCAAAACAGATTACGATGCTCTGATCAGCCA GCTCGGAAACCGGGTTTTTCTCATGCATAATGTTCACGAAGATCGTCCGGTTGTTTTTCAGACCCGATGGGCCATGAGCT ATCTCTGTGGTCCGATGCAGCGACCGCAGATCCGAAAACTGATGGCATCCCGAAAAAAGAGCGTCGCCGAACCCGCAGTC CAGGGCTCGGAACTCCCTGTATCTCCAAACCCTTCATCGTCACCGATTGCAGAGCGCTCGCTCTCCTCCGAAGGGTTCAG CATAAAGCAGCCCTCTCTTGAGCCGACAGTAAAACAGTTCTTTCTGCCCGTATTGATCAGCGCCGAAGAGGCTCTTGAAC AAATTCAGAAAAACAACGGGTCGGAGTCGATCACCCCGCCCCTTCAACTGGTCTATGAGCCTGCCGTCATCGGCTCGGCA TCGGTTGTTTTTTCCGACCGGAAACGAAACATCAGCAAGCAGGAGAACATGCTGCTTGCCTTTCAGGATTTCGGAAGAAA CGAAGGAGCCATTGCCTGGGATAAAGCCGAACAACTCACCATCCAGCCTGACAGCCTGACAGCAGTTCCCGACCAATCTG CGGCAGGGTTTGGCGAAGTTCCTGAAAACGCCAACAAGGCTTCGGAACTCGACCGGTTCAGAAAATCACTGGCAGAGTGG CTGTACTACAATGCCCGGCTGAAACTATCGCAGCACAATGAGCTCGACCTTTTCCGCAGACCCGAAGAGTCCGAGCGTGA CTTTTCGATACGTCTTCAGCAGGCGGCACGTGAAAAACGGGATCTTGAGGTTGATCAGCTTGAAAAAAAGTTTGCCCCGC GCCTCCGGCAGCTTGAGGAAAAGATAGCTCGTGAAGAGCGCGAACTGGCTAAAGACGAGGCGGATCATGAGAGCAGAAAA GCGCAGGAACTGATCGGAATCGGCGAAACCGTGCTTGGATTTTTTCTTGGAAGAAAAAGCAGTCGGGGAATCAGCAGCGC CGTATCGCGAAGGAGAATGACGGCGACAGCTAAAACCGATGTCGAAGAGTCCCGGGAGGTAATCGAAGATCTCCGTAGCG AAATCGCAACACTCGAAGCGGAAATGAAAGAGATGGCCGACACGATAAGAGTAAAATGGGAACATCCGGAAGCAGGTCTT GTCACCGAAGAGCTTGCGCCGAAAAGAAACGACGTCGCCGTCCATTTTGCGACGCTCGGATGGCTCCCCTTCTGGCGCAC GACAGCTACCCTTAATAACCAGGTATCGCGTTCAATAGCCGCCTATGAAGCGGGGGGAAACTAA
Upstream 100 bases:
>100_bases AATCATGCCGCGGGCTTGCTTCAGTGATGAAATATCCGTTTATTTTTTCTGTTCGGGGTAAAATAGCAAAACGCATCCAT CAACCAATCAACAGCCTTTT
Downstream 100 bases:
>100_bases GTCGGAATAAGCTTTCAAACCTCGTTCAGTGAGATCTCTGTGCGGGCTTTCGCAGAAATATATAGCCCGAAAGCAGTATT ACTGCTACAGCGGAAGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 847; Mature: 847
Protein sequence:
>847_residues MQTPEEHLGSFYLGAEYDIPTGKLVDRPVHFDARDLTTHAVCVGMTGSGKTGLCIGLLEEAAIDKVPTLIIDPKGDMTNL LLQFPDLLPENFLPWINEDDARRKGKSVEDLAASTAEVWKKGLADWGIDPGRIRMLQDSADFTIYTPGSDAGVPVNISGS LQAPGVDFDEHAEAIRERINGTVTALLGLAGINADPVRSREAILLAGIFEYFWRKNENLDLAGLIGSIQKPPVRQVGVFD IDTFFPEKERFGLAMSFNTIIASPTFQSWLTGEPLDVDRMLHTREGKPKHSIFYLAHLSDSERMFFVTLLLENVLTWVRA QTGTSSLRALLYFDEVFGFLPPVAEPSSKRPLLTLLKQARASGLGCVLVTQNPVDLDYKGLTNTGTWFIGKLQAERDKER VLEGLKSAISEAGGENGKTDYDALISQLGNRVFLMHNVHEDRPVVFQTRWAMSYLCGPMQRPQIRKLMASRKKSVAEPAV QGSELPVSPNPSSSPIAERSLSSEGFSIKQPSLEPTVKQFFLPVLISAEEALEQIQKNNGSESITPPLQLVYEPAVIGSA SVVFSDRKRNISKQENMLLAFQDFGRNEGAIAWDKAEQLTIQPDSLTAVPDQSAAGFGEVPENANKASELDRFRKSLAEW LYYNARLKLSQHNELDLFRRPEESERDFSIRLQQAAREKRDLEVDQLEKKFAPRLRQLEEKIAREERELAKDEADHESRK AQELIGIGETVLGFFLGRKSSRGISSAVSRRRMTATAKTDVEESREVIEDLRSEIATLEAEMKEMADTIRVKWEHPEAGL VTEELAPKRNDVAVHFATLGWLPFWRTTATLNNQVSRSIAAYEAGGN
Sequences:
>Translated_847_residues MQTPEEHLGSFYLGAEYDIPTGKLVDRPVHFDARDLTTHAVCVGMTGSGKTGLCIGLLEEAAIDKVPTLIIDPKGDMTNL LLQFPDLLPENFLPWINEDDARRKGKSVEDLAASTAEVWKKGLADWGIDPGRIRMLQDSADFTIYTPGSDAGVPVNISGS LQAPGVDFDEHAEAIRERINGTVTALLGLAGINADPVRSREAILLAGIFEYFWRKNENLDLAGLIGSIQKPPVRQVGVFD IDTFFPEKERFGLAMSFNTIIASPTFQSWLTGEPLDVDRMLHTREGKPKHSIFYLAHLSDSERMFFVTLLLENVLTWVRA QTGTSSLRALLYFDEVFGFLPPVAEPSSKRPLLTLLKQARASGLGCVLVTQNPVDLDYKGLTNTGTWFIGKLQAERDKER VLEGLKSAISEAGGENGKTDYDALISQLGNRVFLMHNVHEDRPVVFQTRWAMSYLCGPMQRPQIRKLMASRKKSVAEPAV QGSELPVSPNPSSSPIAERSLSSEGFSIKQPSLEPTVKQFFLPVLISAEEALEQIQKNNGSESITPPLQLVYEPAVIGSA SVVFSDRKRNISKQENMLLAFQDFGRNEGAIAWDKAEQLTIQPDSLTAVPDQSAAGFGEVPENANKASELDRFRKSLAEW LYYNARLKLSQHNELDLFRRPEESERDFSIRLQQAAREKRDLEVDQLEKKFAPRLRQLEEKIAREERELAKDEADHESRK AQELIGIGETVLGFFLGRKSSRGISSAVSRRRMTATAKTDVEESREVIEDLRSEIATLEAEMKEMADTIRVKWEHPEAGL VTEELAPKRNDVAVHFATLGWLPFWRTTATLNNQVSRSIAAYEAGGN >Mature_847_residues MQTPEEHLGSFYLGAEYDIPTGKLVDRPVHFDARDLTTHAVCVGMTGSGKTGLCIGLLEEAAIDKVPTLIIDPKGDMTNL LLQFPDLLPENFLPWINEDDARRKGKSVEDLAASTAEVWKKGLADWGIDPGRIRMLQDSADFTIYTPGSDAGVPVNISGS LQAPGVDFDEHAEAIRERINGTVTALLGLAGINADPVRSREAILLAGIFEYFWRKNENLDLAGLIGSIQKPPVRQVGVFD IDTFFPEKERFGLAMSFNTIIASPTFQSWLTGEPLDVDRMLHTREGKPKHSIFYLAHLSDSERMFFVTLLLENVLTWVRA QTGTSSLRALLYFDEVFGFLPPVAEPSSKRPLLTLLKQARASGLGCVLVTQNPVDLDYKGLTNTGTWFIGKLQAERDKER VLEGLKSAISEAGGENGKTDYDALISQLGNRVFLMHNVHEDRPVVFQTRWAMSYLCGPMQRPQIRKLMASRKKSVAEPAV QGSELPVSPNPSSSPIAERSLSSEGFSIKQPSLEPTVKQFFLPVLISAEEALEQIQKNNGSESITPPLQLVYEPAVIGSA SVVFSDRKRNISKQENMLLAFQDFGRNEGAIAWDKAEQLTIQPDSLTAVPDQSAAGFGEVPENANKASELDRFRKSLAEW LYYNARLKLSQHNELDLFRRPEESERDFSIRLQQAAREKRDLEVDQLEKKFAPRLRQLEEKIAREERELAKDEADHESRK AQELIGIGETVLGFFLGRKSSRGISSAVSRRRMTATAKTDVEESREVIEDLRSEIATLEAEMKEMADTIRVKWEHPEAGL VTEELAPKRNDVAVHFATLGWLPFWRTTATLNNQVSRSIAAYEAGGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94336; Mature: 94336
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTPEEHLGSFYLGAEYDIPTGKLVDRPVHFDARDLTTHAVCVGMTGSGKTGLCIGLLEE CCCCHHHHCCEEECCCCCCCCCCCCCCCCCCCHHHCCEEEEEEEECCCCCCCHHHHHHHH AAIDKVPTLIIDPKGDMTNLLLQFPDLLPENFLPWINEDDARRKGKSVEDLAASTAEVWK HHHCCCCEEEECCCCCHHHHHHHHHHHCCHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHH KGLADWGIDPGRIRMLQDSADFTIYTPGSDAGVPVNISGSLQAPGVDFDEHAEAIRERIN HHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHC GTVTALLGLAGINADPVRSREAILLAGIFEYFWRKNENLDLAGLIGSIQKPPVRQVGVFD CHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCEEE IDTFFPEKERFGLAMSFNTIIASPTFQSWLTGEPLDVDRMLHTREGKPKHSIFYLAHLSD HHHCCCCHHHCCEEEEECCEEECCCHHHHCCCCCCCHHHHHHHCCCCCCCEEEEEEECCC SERMFFVTLLLENVLTWVRAQTGTSSLRALLYFDEVFGFLPPVAEPSSKRPLLTLLKQAR CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH ASGLGCVLVTQNPVDLDYKGLTNTGTWFIGKLQAERDKERVLEGLKSAISEAGGENGKTD CCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCH YDALISQLGNRVFLMHNVHEDRPVVFQTRWAMSYLCGPMQRPQIRKLMASRKKSVAEPAV HHHHHHHHCCEEEEEECCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC QGSELPVSPNPSSSPIAERSLSSEGFSIKQPSLEPTVKQFFLPVLISAEEALEQIQKNNG CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC SESITPPLQLVYEPAVIGSASVVFSDRKRNISKQENMLLAFQDFGRNEGAIAWDKAEQLT CCCCCCCHHHEECCCCCCCCCEEECCHHHCCCHHHCEEEEEHHCCCCCCCEEECCCCEEE IQPDSLTAVPDQSAAGFGEVPENANKASELDRFRKSLAEWLYYNARLKLSQHNELDLFRR ECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHCC PEESERDFSIRLQQAAREKRDLEVDQLEKKFAPRLRQLEEKIAREERELAKDEADHESRK CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AQELIGIGETVLGFFLGRKSSRGISSAVSRRRMTATAKTDVEESREVIEDLRSEIATLEA HHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH EMKEMADTIRVKWEHPEAGLVTEELAPKRNDVAVHFATLGWLPFWRTTATLNNQVSRSIA HHHHHHHHEEEEECCCCCCCCHHHHCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHH AYEAGGN HCCCCCC >Mature Secondary Structure MQTPEEHLGSFYLGAEYDIPTGKLVDRPVHFDARDLTTHAVCVGMTGSGKTGLCIGLLEE CCCCHHHHCCEEECCCCCCCCCCCCCCCCCCCHHHCCEEEEEEEECCCCCCCHHHHHHHH AAIDKVPTLIIDPKGDMTNLLLQFPDLLPENFLPWINEDDARRKGKSVEDLAASTAEVWK HHHCCCCEEEECCCCCHHHHHHHHHHHCCHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHH KGLADWGIDPGRIRMLQDSADFTIYTPGSDAGVPVNISGSLQAPGVDFDEHAEAIRERIN HHHHHCCCCCCCEEEEECCCCEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHC GTVTALLGLAGINADPVRSREAILLAGIFEYFWRKNENLDLAGLIGSIQKPPVRQVGVFD CHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCEEE IDTFFPEKERFGLAMSFNTIIASPTFQSWLTGEPLDVDRMLHTREGKPKHSIFYLAHLSD HHHCCCCHHHCCEEEEECCEEECCCHHHHCCCCCCCHHHHHHHCCCCCCCEEEEEEECCC SERMFFVTLLLENVLTWVRAQTGTSSLRALLYFDEVFGFLPPVAEPSSKRPLLTLLKQAR CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH ASGLGCVLVTQNPVDLDYKGLTNTGTWFIGKLQAERDKERVLEGLKSAISEAGGENGKTD CCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCH YDALISQLGNRVFLMHNVHEDRPVVFQTRWAMSYLCGPMQRPQIRKLMASRKKSVAEPAV HHHHHHHHCCEEEEEECCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC QGSELPVSPNPSSSPIAERSLSSEGFSIKQPSLEPTVKQFFLPVLISAEEALEQIQKNNG CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC SESITPPLQLVYEPAVIGSASVVFSDRKRNISKQENMLLAFQDFGRNEGAIAWDKAEQLT CCCCCCCHHHEECCCCCCCCCEEECCHHHCCCHHHCEEEEEHHCCCCCCCEEECCCCEEE IQPDSLTAVPDQSAAGFGEVPENANKASELDRFRKSLAEWLYYNARLKLSQHNELDLFRR ECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHCC PEESERDFSIRLQQAAREKRDLEVDQLEKKFAPRLRQLEEKIAREERELAKDEADHESRK CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AQELIGIGETVLGFFLGRKSSRGISSAVSRRRMTATAKTDVEESREVIEDLRSEIATLEA HHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH EMKEMADTIRVKWEHPEAGLVTEELAPKRNDVAVHFATLGWLPFWRTTATLNNQVSRSIA HHHHHHHHEEEEECCCCCCCCHHHHCCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHH AYEAGGN HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA