Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357092
Identifier: 119357092
GI number: 119357092
Start: 1458682
End: 1459281
Strand: Direct
Name: 119357092
Synonym: Cpha266_1279
Alternate gene names: NA
Gene position: 1458682-1459281 (Clockwise)
Preceding gene: 119357091
Following gene: 119357096
Centisome position: 46.55
GC content: 42.17
Gene sequence:
>600_bases ATGATCGATTTCACACTGCTTGATAAGCAGACCAGTTTCGAAATGCTGCTCTCACATGAGCAGTTTGAAAGCATGATTGA TTATGCGGAATTTTCATCAGGCAATCTGCTGGAAGATGAGGTTGTACGTACTGTTATTGAGCAGTCTTTTCTGTACCTGA CCGTTCATCCAGTGGATGCGGAAGCATTTGCATTTGGCGATACCAGTTGGCGGATCAAAATTGTCCCCAACCTTGCAAAA TCCGCTATTGTTGCAGCAGTCATGGTTGGACTGTTGCATGCAACTGGTTGTACACATTTGGCAAGTCTTGTATTGCCTGC TGTGTTGCCCTCCCTGATTGATATTGAAACCATTCGGTTGACGGTCAAGGATGACTTGATTCTTGCTGAGATGCGGCGAA ATGATGGCTTACGTGGCAAAGCGTTTTGTCCGCAGGAAATTTATGATCAACTTTCACCATCCACACGGGAACAGTTTTCT TTTATTGAATTTGTGGAAGTGTTAGATGCTTTATCGATATCGGGAAATATGGATTGGGATCAAAATACAGGATTGTTTAC GTTAAATAAAAACAGGAAGCTACGGATAATATTTAGTTGA
Upstream 100 bases:
>100_bases ATGCAGTGGTTGTTACGCCTCCAGATGACCCGTTTACTGGATGAATCACGCTTCGATTTCAAGGCACTAAGTAGCCAATA CGCTTTAATGGGATTTACCA
Downstream 100 bases:
>100_bases ATTTTAAGTTCACTGCTATCCGGTTTTTGAAAATTTAAATCTCTACGGGTGTAGTCGGAAATTAAAAATCAGCCAATTTC GGAAATTAGCAATCACCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MIDFTLLDKQTSFEMLLSHEQFESMIDYAEFSSGNLLEDEVVRTVIEQSFLYLTVHPVDAEAFAFGDTSWRIKIVPNLAK SAIVAAVMVGLLHATGCTHLASLVLPAVLPSLIDIETIRLTVKDDLILAEMRRNDGLRGKAFCPQEIYDQLSPSTREQFS FIEFVEVLDALSISGNMDWDQNTGLFTLNKNRKLRIIFS
Sequences:
>Translated_199_residues MIDFTLLDKQTSFEMLLSHEQFESMIDYAEFSSGNLLEDEVVRTVIEQSFLYLTVHPVDAEAFAFGDTSWRIKIVPNLAK SAIVAAVMVGLLHATGCTHLASLVLPAVLPSLIDIETIRLTVKDDLILAEMRRNDGLRGKAFCPQEIYDQLSPSTREQFS FIEFVEVLDALSISGNMDWDQNTGLFTLNKNRKLRIIFS >Mature_199_residues MIDFTLLDKQTSFEMLLSHEQFESMIDYAEFSSGNLLEDEVVRTVIEQSFLYLTVHPVDAEAFAFGDTSWRIKIVPNLAK SAIVAAVMVGLLHATGCTHLASLVLPAVLPSLIDIETIRLTVKDDLILAEMRRNDGLRGKAFCPQEIYDQLSPSTREQFS FIEFVEVLDALSISGNMDWDQNTGLFTLNKNRKLRIIFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22421; Mature: 22421
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDFTLLDKQTSFEMLLSHEQFESMIDYAEFSSGNLLEDEVVRTVIEQSFLYLTVHPVDA CCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEEEEECCC EAFAFGDTSWRIKIVPNLAKSAIVAAVMVGLLHATGCTHLASLVLPAVLPSLIDIETIRL CEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEE TVKDDLILAEMRRNDGLRGKAFCPQEIYDQLSPSTREQFSFIEFVEVLDALSISGNMDWD EECCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC QNTGLFTLNKNRKLRIIFS CCCCEEEECCCCEEEEEEC >Mature Secondary Structure MIDFTLLDKQTSFEMLLSHEQFESMIDYAEFSSGNLLEDEVVRTVIEQSFLYLTVHPVDA CCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEEEEECCC EAFAFGDTSWRIKIVPNLAKSAIVAAVMVGLLHATGCTHLASLVLPAVLPSLIDIETIRL CEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEE TVKDDLILAEMRRNDGLRGKAFCPQEIYDQLSPSTREQFSFIEFVEVLDALSISGNMDWD EECCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC QNTGLFTLNKNRKLRIIFS CCCCEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA