Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
---|---|
Accession | NC_008639 |
Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119357061
Identifier: 119357061
GI number: 119357061
Start: 1417025
End: 1418248
Strand: Direct
Name: 119357061
Synonym: Cpha266_1248
Alternate gene names: NA
Gene position: 1417025-1418248 (Clockwise)
Preceding gene: 119357060
Following gene: 119357065
Centisome position: 45.22
GC content: 44.53
Gene sequence:
>1224_bases ATGCGTATTTTAACGTTTACCGGAAAAGGCGGCGTAGGAAAGACAAGTGTTTCTGCAGCTACAGCTGTTCGATTATCGGA GCTTGGTTATCGTACGCTTGTCCTTTCAACAGATCCTGCGCATAGTCTGTCGGATTCGTTCAATCTTCCTCTTGGCGCCG AGCCAACAAAGATCAAGGAAAATCTTCATGCCATCGAGATTAATCCCTATGTTGATCTGAAGCAGAATTGGCATGCTGTT CAGAAATTCTATACAGGAATATTCAAGCCCCAGGGCGTATCGGGTGTTGTCGCCGATGAGATGACCATTCTTCCGGGAAT GGAAGAGCTGTTTTCCCTTTTGAGGATAAAACGTTATAAAACTTCAGGACTCTACGATGTTCTCGTACTCGATACCGCTC CGACAGGTGAAACCCTTCGCTTGCTCTCTCTGCCGGACACGCTTGCATGGGGCATGAAAGCCGTTAAAAATGTTACCAAA TATATCGTTCGGCCACTCAGCAAGCCCCTCTCCCGGATGTCTGACAAGATCGCGCAATATATTCCACCTGAAGAAGCGCT GGATTCTGTCGATCAGGTTTTTGATGAACTTGAAGATATTCGCGAGATTCTGACCGATAATCAGAAATCGACTGTCCGTC TGGTGATGAATGCTGAAAAGATGTCGATAAAGGAGACGATGCGAGCACTTACCTATCTCAATCTGTATGGTTTCAAAGTC GATATGGTGCTGGTAAACCGGTTGCTTGACACTAAGGAAAACAGCGGATATCTTGAAAACTGGAAAACCATTCAGCAGAA ATATCTTGGAGAGATCGAACAGAGTTTTTCGCCTCTTCCGGTTAAAAAACTCAGGATGTATGAAGAAGAGATTGTTGGTC TCAAGGCACTTGAGCTTTTTGCCCGGGATATGTATGGCGAAACTGATCCTGCCGATATGATGTACGACGAACCGCCGATC AAGTTCGTTCGCACGGGTGATATTTATGAGGTACAGTTAAAGCTTATGTTTGCCAATCCCGTTGATATCGATGTATGGGT TACTGGTGATGAACTCTATGTACATATCGAAAACCAGCGCAAGATTATCACGCTTCCGATCAGTTTAACCGGACTTGAAC CGGGAGATGCCTATTTCAAGAACAAGTGGCTGCACATTCCTTTTGATCTTGACAATCATAAACAACACAAGACAACAAAG CAGTACAATAAAGCTCTTAATTGA
Upstream 100 bases:
>100_bases TTAGACTTGATATTACAGAGCACGGAAATGTGCTTGACGGAATGTGTTTTTGTTTGTTTGACTGAACTGCGTATTTCTTA ATAAAATCAACCCTTGGATT
Downstream 100 bases:
>100_bases GCAGTTCTAAAGGGGCATTCTGTTTGAGTACTGCATTATTTCTGTTTCAGTGCGCCTGATTTTCTTTCCTTGTGTTTGAA ATCAGTATTCCCTGCAAGTC
Product: arsenite-activated ATPase ArsA
Products: NA
Alternate protein names: Arsenical resistance ATPase; Arsenite-translocating ATPase; Arsenite-transporting ATPase [H]
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MRILTFTGKGGVGKTSVSAATAVRLSELGYRTLVLSTDPAHSLSDSFNLPLGAEPTKIKENLHAIEINPYVDLKQNWHAV QKFYTGIFKPQGVSGVVADEMTILPGMEELFSLLRIKRYKTSGLYDVLVLDTAPTGETLRLLSLPDTLAWGMKAVKNVTK YIVRPLSKPLSRMSDKIAQYIPPEEALDSVDQVFDELEDIREILTDNQKSTVRLVMNAEKMSIKETMRALTYLNLYGFKV DMVLVNRLLDTKENSGYLENWKTIQQKYLGEIEQSFSPLPVKKLRMYEEEIVGLKALELFARDMYGETDPADMMYDEPPI KFVRTGDIYEVQLKLMFANPVDIDVWVTGDELYVHIENQRKIITLPISLTGLEPGDAYFKNKWLHIPFDLDNHKQHKTTK QYNKALN
Sequences:
>Translated_407_residues MRILTFTGKGGVGKTSVSAATAVRLSELGYRTLVLSTDPAHSLSDSFNLPLGAEPTKIKENLHAIEINPYVDLKQNWHAV QKFYTGIFKPQGVSGVVADEMTILPGMEELFSLLRIKRYKTSGLYDVLVLDTAPTGETLRLLSLPDTLAWGMKAVKNVTK YIVRPLSKPLSRMSDKIAQYIPPEEALDSVDQVFDELEDIREILTDNQKSTVRLVMNAEKMSIKETMRALTYLNLYGFKV DMVLVNRLLDTKENSGYLENWKTIQQKYLGEIEQSFSPLPVKKLRMYEEEIVGLKALELFARDMYGETDPADMMYDEPPI KFVRTGDIYEVQLKLMFANPVDIDVWVTGDELYVHIENQRKIITLPISLTGLEPGDAYFKNKWLHIPFDLDNHKQHKTTK QYNKALN >Mature_407_residues MRILTFTGKGGVGKTSVSAATAVRLSELGYRTLVLSTDPAHSLSDSFNLPLGAEPTKIKENLHAIEINPYVDLKQNWHAV QKFYTGIFKPQGVSGVVADEMTILPGMEELFSLLRIKRYKTSGLYDVLVLDTAPTGETLRLLSLPDTLAWGMKAVKNVTK YIVRPLSKPLSRMSDKIAQYIPPEEALDSVDQVFDELEDIREILTDNQKSTVRLVMNAEKMSIKETMRALTYLNLYGFKV DMVLVNRLLDTKENSGYLENWKTIQQKYLGEIEQSFSPLPVKKLRMYEEEIVGLKALELFARDMYGETDPADMMYDEPPI KFVRTGDIYEVQLKLMFANPVDIDVWVTGDELYVHIENQRKIITLPISLTGLEPGDAYFKNKWLHIPFDLDNHKQHKTTK QYNKALN
Specific function: Anion-transporting ATPase. Catalyzes the extrusion of arsenite [H]
COG id: COG0003
COG function: function code P; Oxyanion-translocating ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arsA ATPase family [H]
Homologues:
Organism=Homo sapiens, GI50428938, Length=290, Percent_Identity=26.8965517241379, Blast_Score=104, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17557003, Length=314, Percent_Identity=28.6624203821656, Blast_Score=94, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6320103, Length=317, Percent_Identity=29.9684542586751, Blast_Score=116, Evalue=5e-27, Organism=Drosophila melanogaster, GI24586297, Length=302, Percent_Identity=29.1390728476821, Blast_Score=117, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003348 [H]
Pfam domain/function: NA
EC number: =3.6.3.16 [H]
Molecular weight: Translated: 46363; Mature: 46363
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILTFTGKGGVGKTSVSAATAVRLSELGYRTLVLSTDPAHSLSDSFNLPLGAEPTKIKE CEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHC NLHAIEINPYVDLKQNWHAVQKFYTGIFKPQGVSGVVADEMTILPGMEELFSLLRIKRYK CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCEEECCCHHHHHHHHHHHHHC TSGLYDVLVLDTAPTGETLRLLSLPDTLAWGMKAVKNVTKYIVRPLSKPLSRMSDKIAQY CCCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPPEEALDSVDQVFDELEDIREILTDNQKSTVRLVMNAEKMSIKETMRALTYLNLYGFKV CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCH DMVLVNRLLDTKENSGYLENWKTIQQKYLGEIEQSFSPLPVKKLRMYEEEIVGLKALELF HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH ARDMYGETDPADMMYDEPPIKFVRTGDIYEVQLKLMFANPVDIDVWVTGDELYVHIENQR HHHHCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEEECCCEEEEEEECCEEEEEECCCC KIITLPISLTGLEPGDAYFKNKWLHIPFDLDNHKQHKTTKQYNKALN EEEEEEEEEECCCCCCHHHCCCCEEEECCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MRILTFTGKGGVGKTSVSAATAVRLSELGYRTLVLSTDPAHSLSDSFNLPLGAEPTKIKE CEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHC NLHAIEINPYVDLKQNWHAVQKFYTGIFKPQGVSGVVADEMTILPGMEELFSLLRIKRYK CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCEEECCCHHHHHHHHHHHHHC TSGLYDVLVLDTAPTGETLRLLSLPDTLAWGMKAVKNVTKYIVRPLSKPLSRMSDKIAQY CCCCEEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPPEEALDSVDQVFDELEDIREILTDNQKSTVRLVMNAEKMSIKETMRALTYLNLYGFKV CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCH DMVLVNRLLDTKENSGYLENWKTIQQKYLGEIEQSFSPLPVKKLRMYEEEIVGLKALELF HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH ARDMYGETDPADMMYDEPPIKFVRTGDIYEVQLKLMFANPVDIDVWVTGDELYVHIENQR HHHHCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEEECCCEEEEEEECCEEEEEECCCC KIITLPISLTGLEPGDAYFKNKWLHIPFDLDNHKQHKTTKQYNKALN EEEEEEEEEECCCCCCHHHCCCCEEEECCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]