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The map label for this gene is 119357049

Identifier: 119357049

GI number: 119357049

Start: 1403561

End: 1404532

Strand: Direct

Name: 119357049

Synonym: Cpha266_1236

Alternate gene names: NA

Gene position: 1403561-1404532 (Clockwise)

Preceding gene: 119357048

Following gene: 119357052

Centisome position: 44.79

GC content: 49.59

Gene sequence:

>972_bases
ATGGCATATTACGGATGGTACAAGCCTTCAACTCCGAAAAAAGTCGATAACGGTATCAGGGCAGAGAATAAGCGTGGCGC
ATTTGCCCGGCAATGGTGGGGAAAAGAGTGGATTTCGAGGCTTGAGCGCTTCAATGACAGTTCTCGACTTGCACGAGGAC
GGGCTTATGCCCGAAAGGGGCAGGTTACCGATCTGGTTGTTACGAGCACAGGTGTTTCTGCCAAAGTTCAGGGTTCCAGG
AAAAGCCCGTACAAGGTAATTCTCCGACTTACACCTTTTTCGAAAGAGCAGTGGCGGCGTCTTATCGATATGCTGATCGA
TAAACCGATTCATCTGGCTCAGATGCTTGGCGGAGAAATGTCGGAAAGTATCGAACAGCTATGCAATAAAGAGGGGCTCT
CTCTTTTTCCGAAATCCTTCAGAGAGCTGGAAACTTCGTGTTCATGCCCTGACTATGCAAACCCCTGCAAGCATCTTGCC
GCTGTCTTTTATCTGCTTGCGGAAGCGTTCGACCGTGATCCGTTTCTTCTTTTTACCCTTAGAGGAATGGACAAGGAGAT
GCTTTTCAAGGCTCTCGGTGGAAATCAGGATAGTGTTTCCGAAAAAAAACCAAAAAAAAAGAACTTGGCGGAGTCGCTGC
CTTCCGATGCAGAGGCATTCTGGTCTTCAGGCGGGGATGTGATGTCTGCATTACCTCGTCAACAGCCGACCAGCTCGGCC
ATTTTAATCAAGCGACTCGGTGCGGTTCCGTTCTGGCGGTCTGACAGAAATTTCATATCCGAAATGGAGATAACCTGCAA
TATGGCTTCAGAACGCATGGTACAGGTTATGCAGGAATACTGTCAGACTGACGAATCAGATCAGGACGGCTCGGTCAGTT
GTCTTGCGGTTTCGGATGGCGAGGGAAGAGCAGAGAAGTCGGGGATCGTGTTGTCGGGCAAACGAACGGTTCCGGCGAAA
AAGTTATCGTAG

Upstream 100 bases:

>100_bases
TCGGTTCTCGGCACAGGAGAGCAGTGGCTGACAGAGCTCTCGAACAGTGATTTGAAAAAACTCATTATGCTTGGAAAGGA
AGCAACCGGAGAATAACACC

Downstream 100 bases:

>100_bases
AGGTGTTTATTGTTTAATGTCGCTCACAGTACAGCTTCAATCAGCAAAACAAGTGAGGCGGAGAAATGCCGGGAGGAGCG
CGACATGATTCCCCAGGAAC

Product: zinc finger SWIM domain-containing protein

Products: NA

Alternate protein names: Zinc Finger SWIM Domain-Containing Protein; Zinc Finger SWIM-Type; SWIM Zinc Finger Domain-Containing Protein; SWIM Zinc Finger Domain Protein; SNF2-Related Protein; Zinc Finger Protein; Swim Zinc Finger Domain Protein; Non-Specific Serine/Threonine Protein Kinase; SNF2 Family Helicase; Helicase SNF2 Family; Zinc Finger Domain-Containing Protein; SWIM Zinc Finger Containing Protein; Zinc Finger Swim Domain-Containing Protein; Helicase; SWIM Zinc-Finger Protein; Swim Zn-Finger Containing Protein; Snf2 Family Protein; SWIM Zinc Finger-Containing Protein

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MAYYGWYKPSTPKKVDNGIRAENKRGAFARQWWGKEWISRLERFNDSSRLARGRAYARKGQVTDLVVTSTGVSAKVQGSR
KSPYKVILRLTPFSKEQWRRLIDMLIDKPIHLAQMLGGEMSESIEQLCNKEGLSLFPKSFRELETSCSCPDYANPCKHLA
AVFYLLAEAFDRDPFLLFTLRGMDKEMLFKALGGNQDSVSEKKPKKKNLAESLPSDAEAFWSSGGDVMSALPRQQPTSSA
ILIKRLGAVPFWRSDRNFISEMEITCNMASERMVQVMQEYCQTDESDQDGSVSCLAVSDGEGRAEKSGIVLSGKRTVPAK
KLS

Sequences:

>Translated_323_residues
MAYYGWYKPSTPKKVDNGIRAENKRGAFARQWWGKEWISRLERFNDSSRLARGRAYARKGQVTDLVVTSTGVSAKVQGSR
KSPYKVILRLTPFSKEQWRRLIDMLIDKPIHLAQMLGGEMSESIEQLCNKEGLSLFPKSFRELETSCSCPDYANPCKHLA
AVFYLLAEAFDRDPFLLFTLRGMDKEMLFKALGGNQDSVSEKKPKKKNLAESLPSDAEAFWSSGGDVMSALPRQQPTSSA
ILIKRLGAVPFWRSDRNFISEMEITCNMASERMVQVMQEYCQTDESDQDGSVSCLAVSDGEGRAEKSGIVLSGKRTVPAK
KLS
>Mature_322_residues
AYYGWYKPSTPKKVDNGIRAENKRGAFARQWWGKEWISRLERFNDSSRLARGRAYARKGQVTDLVVTSTGVSAKVQGSRK
SPYKVILRLTPFSKEQWRRLIDMLIDKPIHLAQMLGGEMSESIEQLCNKEGLSLFPKSFRELETSCSCPDYANPCKHLAA
VFYLLAEAFDRDPFLLFTLRGMDKEMLFKALGGNQDSVSEKKPKKKNLAESLPSDAEAFWSSGGDVMSALPRQQPTSSAI
LIKRLGAVPFWRSDRNFISEMEITCNMASERMVQVMQEYCQTDESDQDGSVSCLAVSDGEGRAEKSGIVLSGKRTVPAKK
LS

Specific function: Unknown

COG id: COG4279

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36281; Mature: 36150

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYYGWYKPSTPKKVDNGIRAENKRGAFARQWWGKEWISRLERFNDSSRLARGRAYARKG
CCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
QVTDLVVTSTGVSAKVQGSRKSPYKVILRLTPFSKEQWRRLIDMLIDKPIHLAQMLGGEM
CCEEEEEECCCCCEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHCCHH
SESIEQLCNKEGLSLFPKSFRELETSCSCPDYANPCKHLAAVFYLLAEAFDRDPFLLFTL
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
RGMDKEMLFKALGGNQDSVSEKKPKKKNLAESLPSDAEAFWSSGGDVMSALPRQQPTSSA
CCCCHHHHHHHHCCCCCCHHHCCCHHHHHHHHCCCHHHHHHCCCCHHHHHCCCCCCCHHH
ILIKRLGAVPFWRSDRNFISEMEITCNMASERMVQVMQEYCQTDESDQDGSVSCLAVSDG
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECC
EGRAEKSGIVLSGKRTVPAKKLS
CCCCCCCCEEEECCCCCCHHCCC
>Mature Secondary Structure 
AYYGWYKPSTPKKVDNGIRAENKRGAFARQWWGKEWISRLERFNDSSRLARGRAYARKG
CCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
QVTDLVVTSTGVSAKVQGSRKSPYKVILRLTPFSKEQWRRLIDMLIDKPIHLAQMLGGEM
CCEEEEEECCCCCEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHCCHH
SESIEQLCNKEGLSLFPKSFRELETSCSCPDYANPCKHLAAVFYLLAEAFDRDPFLLFTL
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
RGMDKEMLFKALGGNQDSVSEKKPKKKNLAESLPSDAEAFWSSGGDVMSALPRQQPTSSA
CCCCHHHHHHHHCCCCCCHHHCCCHHHHHHHHCCCHHHHHHCCCCHHHHHCCCCCCCHHH
ILIKRLGAVPFWRSDRNFISEMEITCNMASERMVQVMQEYCQTDESDQDGSVSCLAVSDG
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECC
EGRAEKSGIVLSGKRTVPAKKLS
CCCCCCCCEEEECCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA