Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119357046
Identifier: 119357046
GI number: 119357046
Start: 1399893
End: 1400270
Strand: Direct
Name: 119357046
Synonym: Cpha266_1233
Alternate gene names: NA
Gene position: 1399893-1400270 (Clockwise)
Preceding gene: 119357042
Following gene: 119357047
Centisome position: 44.67
GC content: 43.39
Gene sequence:
>378_bases GTGAGCAATCGAATCGCGTCCTCCGGATGGCGCACTGATAAACTTATCGGGATTGAAAAAAATATCGTCGCATCAGATAG TTCTCCGGCGTTGATCATCATGCAGGAAGGTTTGATGATGTGTTGTTCAGATCATCAGGTTATGTTTTATTATGTTAAGG CTTTCAGGAGAACTGTTGTGCGGGTTGTTGAATGCGATAAAGGATTGTGCTCTGTTTTCCGAAAAGTCGAAATGGTGCTT TTTGACGGAAACGCAGGAGATACGTTGACAAATTCAGGATTGTTTGCTTCAGGTCATTGTAAAATAGTTGAATGGAACCT TACTGACGGCAAGAAAGCGCTTTCCGGGTTCAGGAGATTTGGTGGCAGCAATGCATGA
Upstream 100 bases:
>100_bases TTGAGTGGTTGGCGTTTGGCCCTGCTGATTTGATCGATTAAATATTGACAAGAACAACGCGGCGCCGTAAGACATGGTTC CCTTTTTGTGTGAATAATTC
Downstream 100 bases:
>100_bases CTTGCCGATCTGATGCTTTACTATGCGGAAATGGGTGTGAACTTTACAAACGAGTATGGATATAGTTCAATTGCGTTTTT TCGACAGCGCATGGGGGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MSNRIASSGWRTDKLIGIEKNIVASDSSPALIIMQEGLMMCCSDHQVMFYYVKAFRRTVVRVVECDKGLCSVFRKVEMVL FDGNAGDTLTNSGLFASGHCKIVEWNLTDGKKALSGFRRFGGSNA
Sequences:
>Translated_125_residues MSNRIASSGWRTDKLIGIEKNIVASDSSPALIIMQEGLMMCCSDHQVMFYYVKAFRRTVVRVVECDKGLCSVFRKVEMVL FDGNAGDTLTNSGLFASGHCKIVEWNLTDGKKALSGFRRFGGSNA >Mature_124_residues SNRIASSGWRTDKLIGIEKNIVASDSSPALIIMQEGLMMCCSDHQVMFYYVKAFRRTVVRVVECDKGLCSVFRKVEMVLF DGNAGDTLTNSGLFASGHCKIVEWNLTDGKKALSGFRRFGGSNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13793; Mature: 13662
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRIASSGWRTDKLIGIEKNIVASDSSPALIIMQEGLMMCCSDHQVMFYYVKAFRRTVV CCCCCCCCCCCCCEEECCCCCEEECCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHH RVVECDKGLCSVFRKVEMVLFDGNAGDTLTNSGLFASGHCKIVEWNLTDGKKALSGFRRF HHHHCCCHHHHHHHHHEEEEEECCCCCCCCCCCEEECCCEEEEEEECCCCHHHHHHHHHC GGSNA CCCCC >Mature Secondary Structure SNRIASSGWRTDKLIGIEKNIVASDSSPALIIMQEGLMMCCSDHQVMFYYVKAFRRTVV CCCCCCCCCCCCEEECCCCCEEECCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHH RVVECDKGLCSVFRKVEMVLFDGNAGDTLTNSGLFASGHCKIVEWNLTDGKKALSGFRRF HHHHCCCHHHHHHHHHEEEEEECCCCCCCCCCCEEECCCEEEEEEECCCCHHHHHHHHHC GGSNA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA