Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is putA [C]
Identifier: 119357030
GI number: 119357030
Start: 1382417
End: 1382686
Strand: Direct
Name: putA [C]
Synonym: Cpha266_1216
Alternate gene names: 119357030
Gene position: 1382417-1382686 (Clockwise)
Preceding gene: 119357027
Following gene: 119357031
Centisome position: 44.11
GC content: 52.22
Gene sequence:
>270_bases ATGTCACAGACAAAAGGCGTCAAGTTAGACGACACTACACAACAACGGCTTGCAGCTCTCGGTCGTATCCGCGACAGATC GCCCCACTGGCTCATGTGCAGGGCAATCGAAACATACTTGGATCGCGAAGAAAAATATGAGCAGGAAAAGCGAGAGGATA TGGAGCGTTGGGAACAGTATCAATTGACCGGCGTTGCAGTGCCCCATGAACAAGCTGCTGAATGGCTTGAAAATCTGGCG CAAGGGAAGGTGACGGCGTGCCCCGGATAA
Upstream 100 bases:
>100_bases TCAAGAGGTTACCCCATACATCCCAAATATTTCAAACGGCAAAACTCAATCTTCTACGCTATTGCACTGCGTCCCCTCTA ATCTCAAAGGAGATTTGATC
Downstream 100 bases:
>100_bases AATGGCTTCCGGATGCATTGTCCGATGTCGAGCGGCTTCATGCTTTCCTGCATGAAAAAAGCCCCGATGCGGCAGCACGA GCGGCAAGGGTCATTCTTGA
Product: hypothetical protein
Products: 1-Pyrroline-5-carboxylate; FADH2; H+ [C]
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSQTKGVKLDDTTQQRLAALGRIRDRSPHWLMCRAIETYLDREEKYEQEKREDMERWEQYQLTGVAVPHEQAAEWLENLA QGKVTACPG
Sequences:
>Translated_89_residues MSQTKGVKLDDTTQQRLAALGRIRDRSPHWLMCRAIETYLDREEKYEQEKREDMERWEQYQLTGVAVPHEQAAEWLENLA QGKVTACPG >Mature_88_residues SQTKGVKLDDTTQQRLAALGRIRDRSPHWLMCRAIETYLDREEKYEQEKREDMERWEQYQLTGVAVPHEQAAEWLENLAQ GKVTACPG
Specific function: Oxidizes Proline To Glutamate For Use As A Carbon And Nitrogen Source And Also Function As A Transcriptional Repressor Of The Put Operon. [C]
COG id: COG3905
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.5.99.8; 1.5.1.12 [C]
Molecular weight: Translated: 10420; Mature: 10289
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTKGVKLDDTTQQRLAALGRIRDRSPHWLMCRAIETYLDREEKYEQEKREDMERWEQY CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH QLTGVAVPHEQAAEWLENLAQGKVTACPG HHHCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SQTKGVKLDDTTQQRLAALGRIRDRSPHWLMCRAIETYLDREEKYEQEKREDMERWEQY CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH QLTGVAVPHEQAAEWLENLAQGKVTACPG HHHCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: FAD [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 45 {@PROL01.txt*L-proline!}} [C]
Substrates: FAD; L-Proline [C]
Specific reaction: FAD + L-Proline --> 1-Pyrroline-5-carboxylate + FADH2 + H+ [C]
General reaction: Redox reaction [C]
Inhibitor: L-Azetidine-2-carboxylate; Lactate; Pyruvate [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA