Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
---|---|
Accession | NC_008639 |
Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119357015
Identifier: 119357015
GI number: 119357015
Start: 1359726
End: 1360799
Strand: Direct
Name: 119357015
Synonym: Cpha266_1199
Alternate gene names: NA
Gene position: 1359726-1360799 (Clockwise)
Preceding gene: 119357013
Following gene: 119357016
Centisome position: 43.39
GC content: 45.81
Gene sequence:
>1074_bases ATGGCTTTTAACGATAAAAAACACCCGAACCTTGAACGCCTGCTGATAAACGCAAGGCCGGTAACGCTCGATGCCTCATC GCGCGTGCTGATTCTCAGCGATCTTCATATGGGCAATGGCGGAAGACGAGATGAGTTCAGACGGAACGCCGAACTTCTCA GCACTCTGCTCGGCAATTATTATCTCCCTGAACAGTACAATCTTGTTCTTAACGGTGATATTGAAGAGCTGTTCAAGTTT CCGTTACAGGGCATAATGGATCAGTGGGGCAGCTTTTATGAGCTTTTTGAGAAGTTCGAACAGAACGGTTTTTTTTTGAA AACGTATGGCAATCATGATACCGGACTGCTTGATGAGAAAGAGTATCCGTTAAAGAGCTATCTGGTTGAATCGCTCAAAT TCCATTACGGTAAAGAGACCATGCTGCTTTTTCACGGCCATCAGGCATCGGTGCTGCTCTGGGAGACCTATCCCCTGGTC AGTCGCCTTGTCGTCTTTTTTCTGCGTTATATAGCAAAACCCTTCGGTATCAGAAACTTCTCTATTGCCTATAACAGCAG GCGTCGTTTTGCGATTGAAAAATCAATTTATGACTTCTCGAACAGGGCCAAAATCGTCTCCATTATCGGGCATACGCACC GCCCGCTCTTTGAATCCCTTTCCAAAGTCGACTTTCTGAACTTTCGCATTGAAGAGCTTTGTCGAGCTTATCCCGCAGCA GATTCCGATCTCCGTATCTTAATACGGGAACAGATCGATGCCCTTAAAACCGAACTCGACTCCTGCTTTAAAAAAGGGAA AAAAATCGGACTCAGAAGCGGGCTCTACAACACCCTGACGATTCCAAGCGTTTTCAATTCAGGTTGCGGTATCGGCAAAC GGGGAATAACCGCGCTTGAAATCGAAGGCGATAAAATCAGGCTGGTGTACTGGTTTAATGGAAAACAGAGCAAAAAGTTT ATCAGTGACCGCGATAATCATCCTGTTGAACTCGCATCGACGGGATATTCAAGACTTGTGCTCAATGAAGACAGTCTCGA CTATGTTTTTTCCCGTCTCCATCTGCTTGCATGA
Upstream 100 bases:
>100_bases CTTTATAGAGATACCCTGAAAAAATGGCCCGGTACAACGCGCAGGTAATATAACAAGTGCGTTTGCCTCCGGTAATGATG AATTCTTGTTGCCGTGTATC
Downstream 100 bases:
>100_bases GCCTGTTTAACCGCATCCGGATGATCGCTTGTTCGGCAGGGGAAGTGCTCCCCTGTTCATGAATTGGCTTAACTGATCGA TTCTCTTTTTTTTGAATCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MAFNDKKHPNLERLLINARPVTLDASSRVLILSDLHMGNGGRRDEFRRNAELLSTLLGNYYLPEQYNLVLNGDIEELFKF PLQGIMDQWGSFYELFEKFEQNGFFLKTYGNHDTGLLDEKEYPLKSYLVESLKFHYGKETMLLFHGHQASVLLWETYPLV SRLVVFFLRYIAKPFGIRNFSIAYNSRRRFAIEKSIYDFSNRAKIVSIIGHTHRPLFESLSKVDFLNFRIEELCRAYPAA DSDLRILIREQIDALKTELDSCFKKGKKIGLRSGLYNTLTIPSVFNSGCGIGKRGITALEIEGDKIRLVYWFNGKQSKKF ISDRDNHPVELASTGYSRLVLNEDSLDYVFSRLHLLA
Sequences:
>Translated_357_residues MAFNDKKHPNLERLLINARPVTLDASSRVLILSDLHMGNGGRRDEFRRNAELLSTLLGNYYLPEQYNLVLNGDIEELFKF PLQGIMDQWGSFYELFEKFEQNGFFLKTYGNHDTGLLDEKEYPLKSYLVESLKFHYGKETMLLFHGHQASVLLWETYPLV SRLVVFFLRYIAKPFGIRNFSIAYNSRRRFAIEKSIYDFSNRAKIVSIIGHTHRPLFESLSKVDFLNFRIEELCRAYPAA DSDLRILIREQIDALKTELDSCFKKGKKIGLRSGLYNTLTIPSVFNSGCGIGKRGITALEIEGDKIRLVYWFNGKQSKKF ISDRDNHPVELASTGYSRLVLNEDSLDYVFSRLHLLA >Mature_356_residues AFNDKKHPNLERLLINARPVTLDASSRVLILSDLHMGNGGRRDEFRRNAELLSTLLGNYYLPEQYNLVLNGDIEELFKFP LQGIMDQWGSFYELFEKFEQNGFFLKTYGNHDTGLLDEKEYPLKSYLVESLKFHYGKETMLLFHGHQASVLLWETYPLVS RLVVFFLRYIAKPFGIRNFSIAYNSRRRFAIEKSIYDFSNRAKIVSIIGHTHRPLFESLSKVDFLNFRIEELCRAYPAAD SDLRILIREQIDALKTELDSCFKKGKKIGLRSGLYNTLTIPSVFNSGCGIGKRGITALEIEGDKIRLVYWFNGKQSKKFI SDRDNHPVELASTGYSRLVLNEDSLDYVFSRLHLLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41326; Mature: 41195
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFNDKKHPNLERLLINARPVTLDASSRVLILSDLHMGNGGRRDEFRRNAELLSTLLGNY CCCCCCCCCCHHHEEEECCEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCC YLPEQYNLVLNGDIEELFKFPLQGIMDQWGSFYELFEKFEQNGFFLKTYGNHDTGLLDEK CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC EYPLKSYLVESLKFHYGKETMLLFHGHQASVLLWETYPLVSRLVVFFLRYIAKPFGIRNF CCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCEE SIAYNSRRRFAIEKSIYDFSNRAKIVSIIGHTHRPLFESLSKVDFLNFRIEELCRAYPAA EEEECCCCEEEEHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC DSDLRILIREQIDALKTELDSCFKKGKKIGLRSGLYNTLTIPSVFNSGCGIGKRGITALE CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCEECHHHHCCCCCCCCCCCEEEE IEGDKIRLVYWFNGKQSKKFISDRDNHPVELASTGYSRLVLNEDSLDYVFSRLHLLA ECCCEEEEEEEECCCCCHHHHCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCC >Mature Secondary Structure AFNDKKHPNLERLLINARPVTLDASSRVLILSDLHMGNGGRRDEFRRNAELLSTLLGNY CCCCCCCCCHHHEEEECCEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCC YLPEQYNLVLNGDIEELFKFPLQGIMDQWGSFYELFEKFEQNGFFLKTYGNHDTGLLDEK CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC EYPLKSYLVESLKFHYGKETMLLFHGHQASVLLWETYPLVSRLVVFFLRYIAKPFGIRNF CCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCEE SIAYNSRRRFAIEKSIYDFSNRAKIVSIIGHTHRPLFESLSKVDFLNFRIEELCRAYPAA EEEECCCCEEEEHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC DSDLRILIREQIDALKTELDSCFKKGKKIGLRSGLYNTLTIPSVFNSGCGIGKRGITALE CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCEECHHHHCCCCCCCCCCCEEEE IEGDKIRLVYWFNGKQSKKFISDRDNHPVELASTGYSRLVLNEDSLDYVFSRLHLLA ECCCEEEEEEEECCCCCHHHHCCCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA