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The map label for this gene is yqeZ [H]

Identifier: 119356977

GI number: 119356977

Start: 1307084

End: 1308421

Strand: Direct

Name: yqeZ [H]

Synonym: Cpha266_1160

Alternate gene names: 119356977

Gene position: 1307084-1308421 (Clockwise)

Preceding gene: 119356975

Following gene: 119356978

Centisome position: 41.71

GC content: 52.09

Gene sequence:

>1338_bases
ATGATGGTTATTGGACGAATACGATGGAGCAGAGTGTTTGCCGTGCGTTTTTTTTTCATTGCTGTCGTATCGGCAATCGC
TTTGATTTCTTCTCCTGCCGATGGCGCCGAAAACCTTGTATCGAGAATCGTGCTTAAGGGGTCGGTTAATCCCGGCAGCG
CAGGTTTTTTTTCGAGGGCACTTCATGATGCCCGCCGATCCGGCTCCGATGCCGTGCTTGTGGAGCTGGATACGCCCGGA
GGTCTGGTGAGCTCTCTCCGTTCCATGGTGCAGGAGATCATGGCATCTCCGATACCGGTGATCGTGTACGTCTATCCTTC
GGGTGCCCAGGCGGCATCAGCAGGAGCCCTCCTGATGCTTTCGGCGCATGTTGCGGCAATGGCTCCTGGAACGGAGATCG
GCGCGGCTCATCCCGTGGGTGCAGGAGGAAAGAGCGACGGGGATGAAACGATGAAAAAGAAAGTGGTGAATGATCTTGCT
GCGTTTGCCCGGAGTCTTGCGGAAAAACGGGGACGAAATGCACAGTGGGCTGAAAAAGCCGTAACGGAGAGTGTTTCATC
GACAGCGCAGGAGGCACTGCAGGCAGGCGTTATCGATATGATTTCGGATAATCCGTCGGAGGTGCTGAGCCGGTTGCGTG
GAATGAAAATAATGACCGTTGCCGGAGAAAAGGGGTTCACAGGAGCTTCCTTTACCATTCGGGAGATCAGGCCCACGTTC
AAGGAGTCGGCGCTCATGACTATCGCTGATCCCAATCTGTCCTATATTTTATTTCTTGCCGGCATAGCAGGGCTTTACTT
TGAACTGGCTACTCCAGGTGCGATTTTTCCGGGCGTGGCCGGTGCGATTTCGCTGTTACTCGGTTTATATTCGATGCAGA
CGCTCTCGGTAAATGTGACCGGCCTGCTTCTTCTTCTGCTTGCCGTTCTGTTTCTTGGTCTCGAACTGTTTGTTACCAGC
GGCGGGATTCTTGCCGTCGCAGGCCTTGTTGCGCTTTTTGCAGGATCAATCATGCTTTTCGATCTGCCTGGTTCGGGAAT
CACGCTTTCACTTCAGGTGATTCTGCCTGTTTTTGTCCTGTTTTCCATTGGTATCGCGCTTCTTTTACGGGTGGTTTTCA
GGTCCGGAAAGGAGCCTCCTCTCATGGGAAAGAGCGCTCTCATCGGTCAGAGCGGGCGCGTTGTGCGGTTTATTGAAACG
GATAAGCCGGGTAAGGTATTTGTTCATGGAGAGCTATGGGATGCTTCATCTTCGGAATGCATCGTTGAGGAAACCGTTGT
TGTCGTTACTGGTATAGAGGGAATGGAATTGAAGGTTAAAACAAAACAAAAGGAATAA

Upstream 100 bases:

>100_bases
AAGAAGCGCGTTTTCCTTTCCGGTAACGTTCTCTTGAGGGAGAAAAGACGAACTTTTGCGGTTTTCGTTATATTGATTAT
TGAATACAAAAAGGAAAAAG

Downstream 100 bases:

>100_bases
TCATGCTTACGTTTAATGTTCTCACGGTTCTGATTCTGGTCGGCGTTTTCTTCTTTTCGGCAGTTAAAATTCTCAGGGAG
TACGAACGCGGCGTTATTTT

Product: nodulation efficiency protein NfeD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MMVIGRIRWSRVFAVRFFFIAVVSAIALISSPADGAENLVSRIVLKGSVNPGSAGFFSRALHDARRSGSDAVLVELDTPG
GLVSSLRSMVQEIMASPIPVIVYVYPSGAQAASAGALLMLSAHVAAMAPGTEIGAAHPVGAGGKSDGDETMKKKVVNDLA
AFARSLAEKRGRNAQWAEKAVTESVSSTAQEALQAGVIDMISDNPSEVLSRLRGMKIMTVAGEKGFTGASFTIREIRPTF
KESALMTIADPNLSYILFLAGIAGLYFELATPGAIFPGVAGAISLLLGLYSMQTLSVNVTGLLLLLLAVLFLGLELFVTS
GGILAVAGLVALFAGSIMLFDLPGSGITLSLQVILPVFVLFSIGIALLLRVVFRSGKEPPLMGKSALIGQSGRVVRFIET
DKPGKVFVHGELWDASSSECIVEETVVVVTGIEGMELKVKTKQKE

Sequences:

>Translated_445_residues
MMVIGRIRWSRVFAVRFFFIAVVSAIALISSPADGAENLVSRIVLKGSVNPGSAGFFSRALHDARRSGSDAVLVELDTPG
GLVSSLRSMVQEIMASPIPVIVYVYPSGAQAASAGALLMLSAHVAAMAPGTEIGAAHPVGAGGKSDGDETMKKKVVNDLA
AFARSLAEKRGRNAQWAEKAVTESVSSTAQEALQAGVIDMISDNPSEVLSRLRGMKIMTVAGEKGFTGASFTIREIRPTF
KESALMTIADPNLSYILFLAGIAGLYFELATPGAIFPGVAGAISLLLGLYSMQTLSVNVTGLLLLLLAVLFLGLELFVTS
GGILAVAGLVALFAGSIMLFDLPGSGITLSLQVILPVFVLFSIGIALLLRVVFRSGKEPPLMGKSALIGQSGRVVRFIET
DKPGKVFVHGELWDASSSECIVEETVVVVTGIEGMELKVKTKQKE
>Mature_445_residues
MMVIGRIRWSRVFAVRFFFIAVVSAIALISSPADGAENLVSRIVLKGSVNPGSAGFFSRALHDARRSGSDAVLVELDTPG
GLVSSLRSMVQEIMASPIPVIVYVYPSGAQAASAGALLMLSAHVAAMAPGTEIGAAHPVGAGGKSDGDETMKKKVVNDLA
AFARSLAEKRGRNAQWAEKAVTESVSSTAQEALQAGVIDMISDNPSEVLSRLRGMKIMTVAGEKGFTGASFTIREIRPTF
KESALMTIADPNLSYILFLAGIAGLYFELATPGAIFPGVAGAISLLLGLYSMQTLSVNVTGLLLLLLAVLFLGLELFVTS
GGILAVAGLVALFAGSIMLFDLPGSGITLSLQVILPVFVLFSIGIALLLRVVFRSGKEPPLMGKSALIGQSGRVVRFIET
DKPGKVFVHGELWDASSSECIVEETVVVVTGIEGMELKVKTKQKE

Specific function: Unknown

COG id: COG1030

COG function: function code O; Membrane-bound serine protease (ClpP class)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002810
- InterPro:   IPR002825 [H]

Pfam domain/function: PF01972 DUF114; PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 46699; Mature: 46699

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVIGRIRWSRVFAVRFFFIAVVSAIALISSPADGAENLVSRIVLKGSVNPGSAGFFSRA
CEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHH
LHDARRSGSDAVLVELDTPGGLVSSLRSMVQEIMASPIPVIVYVYPSGAQAASAGALLML
HHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHH
SAHVAAMAPGTEIGAAHPVGAGGKSDGDETMKKKVVNDLAAFARSLAEKRGRNAQWAEKA
HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VTESVSSTAQEALQAGVIDMISDNPSEVLSRLRGMKIMTVAGEKGFTGASFTIREIRPTF
HHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCCEEEEEECCCCCCCCCEEHHHHCHHH
KESALMTIADPNLSYILFLAGIAGLYFELATPGAIFPGVAGAISLLLGLYSMQTLSVNVT
HHCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEECHH
GLLLLLLAVLFLGLELFVTSGGILAVAGLVALFAGSIMLFDLPGSGITLSLQVILPVFVL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCCEEEHHHHHHHHHH
FSIGIALLLRVVFRSGKEPPLMGKSALIGQSGRVVRFIETDKPGKVFVHGELWDASSSEC
HHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCE
IVEETVVVVTGIEGMELKVKTKQKE
EEECEEEEEECCCCCEEEEECCCCC
>Mature Secondary Structure
MMVIGRIRWSRVFAVRFFFIAVVSAIALISSPADGAENLVSRIVLKGSVNPGSAGFFSRA
CEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHH
LHDARRSGSDAVLVELDTPGGLVSSLRSMVQEIMASPIPVIVYVYPSGAQAASAGALLML
HHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHH
SAHVAAMAPGTEIGAAHPVGAGGKSDGDETMKKKVVNDLAAFARSLAEKRGRNAQWAEKA
HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VTESVSSTAQEALQAGVIDMISDNPSEVLSRLRGMKIMTVAGEKGFTGASFTIREIRPTF
HHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCCEEEEEECCCCCCCCCEEHHHHCHHH
KESALMTIADPNLSYILFLAGIAGLYFELATPGAIFPGVAGAISLLLGLYSMQTLSVNVT
HHCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEECHH
GLLLLLLAVLFLGLELFVTSGGILAVAGLVALFAGSIMLFDLPGSGITLSLQVILPVFVL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCCEEEHHHHHHHHHH
FSIGIALLLRVVFRSGKEPPLMGKSALIGQSGRVVRFIETDKPGKVFVHGELWDASSSEC
HHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCE
IVEETVVVVTGIEGMELKVKTKQKE
EEECEEEEEECCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]