Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is ubiE [H]
Identifier: 119356974
GI number: 119356974
Start: 1305135
End: 1305698
Strand: Direct
Name: ubiE [H]
Synonym: Cpha266_1157
Alternate gene names: 119356974
Gene position: 1305135-1305698 (Clockwise)
Preceding gene: 119356973
Following gene: 119356975
Centisome position: 41.65
GC content: 47.34
Gene sequence:
>564_bases GTGAGTAAAAACAATATCAGTCTCTGTCCGGTTGAGAGTGCGGGGGGCCTTGATAACAGCATTCGACGATGGGTTCAAAA CCCCCGGAAAATTCTTGGGCCATATATCACTGAAGGAATGAGGGTTATGGATGTCGGATGTGGTCCGGGCTTTTTCACCA TCGAGATGGCAAGGATGGTCGGTAAATCAGGCCGGGTTATCGCGTCCGATGTACAGGAAGGGATGCTTCAGATCGTAAAA GAGAAGGTTAAAGGAACAGAGCTTGATGGTCGAATTCTCCTGCACAAGTGCGGAGAGGACAAAATAGGGGTCTCGGCGTC TGTTGATTTTGTTCTGTTGTTCTACATGGTTCACGAAGTTCCTGACAAGGAGCGGTTTTTCAATGAGATCGGAACAATAG TGAAGCCGCAGGGAAAGGTTCTGATAGTAGAGCCGCCATTTCATGTTTCAAAATCAGCGTTTGAAGCGACGGTCGAAAAA GCCGGAGATGCAGGGTTTGTTATTGTTGAAAGACCAAGGGTGTTTTTCAGCAGGGCGGTGTTATTAAGAAAAGGTTCCGT GTAA
Upstream 100 bases:
>100_bases AAGAAGAGCAGCTGTTCGTCCGGAGAAATTCTGAGGCAATGCTCCTGACGGAGTGTATGCGGTGATTTTGGTTGTTTGAT CCTAAAAGGAGAACGTTGTT
Downstream 100 bases:
>100_bases ATGAGCACGAATTTTACGATTCAAAGAGCAACAGGCGGTGATTTGCAGGAGGTCGCTGTAATGGTCGGGGAGTTGCTGTC CGGGATCATGAACGTCTTCG
Product: methyltransferase type 11
Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MSKNNISLCPVESAGGLDNSIRRWVQNPRKILGPYITEGMRVMDVGCGPGFFTIEMARMVGKSGRVIASDVQEGMLQIVK EKVKGTELDGRILLHKCGEDKIGVSASVDFVLLFYMVHEVPDKERFFNEIGTIVKPQGKVLIVEPPFHVSKSAFEATVEK AGDAGFVIVERPRVFFSRAVLLRKGSV
Sequences:
>Translated_187_residues MSKNNISLCPVESAGGLDNSIRRWVQNPRKILGPYITEGMRVMDVGCGPGFFTIEMARMVGKSGRVIASDVQEGMLQIVK EKVKGTELDGRILLHKCGEDKIGVSASVDFVLLFYMVHEVPDKERFFNEIGTIVKPQGKVLIVEPPFHVSKSAFEATVEK AGDAGFVIVERPRVFFSRAVLLRKGSV >Mature_186_residues SKNNISLCPVESAGGLDNSIRRWVQNPRKILGPYITEGMRVMDVGCGPGFFTIEMARMVGKSGRVIASDVQEGMLQIVKE KVKGTELDGRILLHKCGEDKIGVSASVDFVLLFYMVHEVPDKERFFNEIGTIVKPQGKVLIVEPPFHVSKSAFEATVEKA GDAGFVIVERPRVFFSRAVLLRKGSV
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014122 - InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 20625; Mature: 20494
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNNISLCPVESAGGLDNSIRRWVQNPRKILGPYITEGMRVMDVGCGPGFFTIEMARMV CCCCCCEEEECCCCCCCHHHHHHHHHCHHHHHCHHHHCCCEEEECCCCCCHHHHHHHHHH GKSGRVIASDVQEGMLQIVKEKVKGTELDGRILLHKCGEDKIGVSASVDFVLLFYMVHEV CCCCCEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHC PDKERFFNEIGTIVKPQGKVLIVEPPFHVSKSAFEATVEKAGDAGFVIVERPRVFFSRAV CCHHHHHHHHCCEECCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHH LLRKGSV HHHCCCC >Mature Secondary Structure SKNNISLCPVESAGGLDNSIRRWVQNPRKILGPYITEGMRVMDVGCGPGFFTIEMARMV CCCCCEEEECCCCCCCHHHHHHHHHCHHHHHCHHHHCCCEEEECCCCCCHHHHHHHHHH GKSGRVIASDVQEGMLQIVKEKVKGTELDGRILLHKCGEDKIGVSASVDFVLLFYMVHEV CCCCCEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHC PDKERFFNEIGTIVKPQGKVLIVEPPFHVSKSAFEATVEKAGDAGFVIVERPRVFFSRAV CCHHHHHHHHCCEECCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHH LLRKGSV HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]
Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]
General reaction: Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA