Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is ubiE [H]

Identifier: 119356974

GI number: 119356974

Start: 1305135

End: 1305698

Strand: Direct

Name: ubiE [H]

Synonym: Cpha266_1157

Alternate gene names: 119356974

Gene position: 1305135-1305698 (Clockwise)

Preceding gene: 119356973

Following gene: 119356975

Centisome position: 41.65

GC content: 47.34

Gene sequence:

>564_bases
GTGAGTAAAAACAATATCAGTCTCTGTCCGGTTGAGAGTGCGGGGGGCCTTGATAACAGCATTCGACGATGGGTTCAAAA
CCCCCGGAAAATTCTTGGGCCATATATCACTGAAGGAATGAGGGTTATGGATGTCGGATGTGGTCCGGGCTTTTTCACCA
TCGAGATGGCAAGGATGGTCGGTAAATCAGGCCGGGTTATCGCGTCCGATGTACAGGAAGGGATGCTTCAGATCGTAAAA
GAGAAGGTTAAAGGAACAGAGCTTGATGGTCGAATTCTCCTGCACAAGTGCGGAGAGGACAAAATAGGGGTCTCGGCGTC
TGTTGATTTTGTTCTGTTGTTCTACATGGTTCACGAAGTTCCTGACAAGGAGCGGTTTTTCAATGAGATCGGAACAATAG
TGAAGCCGCAGGGAAAGGTTCTGATAGTAGAGCCGCCATTTCATGTTTCAAAATCAGCGTTTGAAGCGACGGTCGAAAAA
GCCGGAGATGCAGGGTTTGTTATTGTTGAAAGACCAAGGGTGTTTTTCAGCAGGGCGGTGTTATTAAGAAAAGGTTCCGT
GTAA

Upstream 100 bases:

>100_bases
AAGAAGAGCAGCTGTTCGTCCGGAGAAATTCTGAGGCAATGCTCCTGACGGAGTGTATGCGGTGATTTTGGTTGTTTGAT
CCTAAAAGGAGAACGTTGTT

Downstream 100 bases:

>100_bases
ATGAGCACGAATTTTACGATTCAAAGAGCAACAGGCGGTGATTTGCAGGAGGTCGCTGTAATGGTCGGGGAGTTGCTGTC
CGGGATCATGAACGTCTTCG

Product: methyltransferase type 11

Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSKNNISLCPVESAGGLDNSIRRWVQNPRKILGPYITEGMRVMDVGCGPGFFTIEMARMVGKSGRVIASDVQEGMLQIVK
EKVKGTELDGRILLHKCGEDKIGVSASVDFVLLFYMVHEVPDKERFFNEIGTIVKPQGKVLIVEPPFHVSKSAFEATVEK
AGDAGFVIVERPRVFFSRAVLLRKGSV

Sequences:

>Translated_187_residues
MSKNNISLCPVESAGGLDNSIRRWVQNPRKILGPYITEGMRVMDVGCGPGFFTIEMARMVGKSGRVIASDVQEGMLQIVK
EKVKGTELDGRILLHKCGEDKIGVSASVDFVLLFYMVHEVPDKERFFNEIGTIVKPQGKVLIVEPPFHVSKSAFEATVEK
AGDAGFVIVERPRVFFSRAVLLRKGSV
>Mature_186_residues
SKNNISLCPVESAGGLDNSIRRWVQNPRKILGPYITEGMRVMDVGCGPGFFTIEMARMVGKSGRVIASDVQEGMLQIVKE
KVKGTELDGRILLHKCGEDKIGVSASVDFVLLFYMVHEVPDKERFFNEIGTIVKPQGKVLIVEPPFHVSKSAFEATVEKA
GDAGFVIVERPRVFFSRAVLLRKGSV

Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014122
- InterPro:   IPR004033 [H]

Pfam domain/function: PF01209 Ubie_methyltran [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 20625; Mature: 20494

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNNISLCPVESAGGLDNSIRRWVQNPRKILGPYITEGMRVMDVGCGPGFFTIEMARMV
CCCCCCEEEECCCCCCCHHHHHHHHHCHHHHHCHHHHCCCEEEECCCCCCHHHHHHHHHH
GKSGRVIASDVQEGMLQIVKEKVKGTELDGRILLHKCGEDKIGVSASVDFVLLFYMVHEV
CCCCCEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHC
PDKERFFNEIGTIVKPQGKVLIVEPPFHVSKSAFEATVEKAGDAGFVIVERPRVFFSRAV
CCHHHHHHHHCCEECCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHH
LLRKGSV
HHHCCCC
>Mature Secondary Structure 
SKNNISLCPVESAGGLDNSIRRWVQNPRKILGPYITEGMRVMDVGCGPGFFTIEMARMV
CCCCCEEEECCCCCCCHHHHHHHHHCHHHHHCHHHHCCCEEEECCCCCCHHHHHHHHHH
GKSGRVIASDVQEGMLQIVKEKVKGTELDGRILLHKCGEDKIGVSASVDFVLLFYMVHEV
CCCCCEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHC
PDKERFFNEIGTIVKPQGKVLIVEPPFHVSKSAFEATVEKAGDAGFVIVERPRVFFSRAV
CCHHHHHHHHCCEECCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHH
LLRKGSV
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]

Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]

General reaction: Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA