Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119356945
Identifier: 119356945
GI number: 119356945
Start: 1272059
End: 1272547
Strand: Direct
Name: 119356945
Synonym: Cpha266_1125
Alternate gene names: NA
Gene position: 1272059-1272547 (Clockwise)
Preceding gene: 119356944
Following gene: 119356946
Centisome position: 40.59
GC content: 53.99
Gene sequence:
>489_bases ATGTCAGAAAGATCACGAATAAAAAATCTCCTCGTTGTAGCAGCAATGCTGCTTGCCGGATATTTCTGGTTCACCGGCCA GGGCCAGCATAGCACAACTTCCAATAAAGCGTCGAACGCTATACAGAGCCGGAATCAGCGGCCGAGCCCTGATAAATCCG ATACGGTCATTGCGAAAGCATTTGCGAACAGGCAGAGTAACCTGCAGGTCTCGGGAGAAGGGGTTGTGATCAAGCTGCTG CCCGATTACCAGAGCGGCAGCCGGCATCAGAAGTTCGTCGTCAGGCTGTCGAGCGGGCAAACCCTGCTGATCGCACACAA TATCGATCTTGCAAAGAGAGTAAGCGGTCTCGGAGAAGGTGACACGGTCACGTTCAGCGGCGAGTACGAATGGAGCGCAA AAGGAGGTGCCTTGCACTGGACACATCGGGATCCCGATGGATCTCACCCGACAGGGTGGATACAGCACCATGGTCGAACG TATCAGTGA
Upstream 100 bases:
>100_bases ACCGGAAACGGGTTGGCATTATTTTCCGGATAACCCGGAGGTTTTATCGTAGATAAAAAAACTGCCGGCTTCAGCCGAAT CAGGGGGATCGCACGAAACC
Downstream 100 bases:
>100_bases AACTGCATGGAAAGGTTCTGATTTTTTCAAACGCCATTTCACGTTTAAAATCAGCATTTGAAGAAACAGTCAGAAAAGCA GGGCGTGCCGGTTTGTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSERSRIKNLLVVAAMLLAGYFWFTGQGQHSTTSNKASNAIQSRNQRPSPDKSDTVIAKAFANRQSNLQVSGEGVVIKLL PDYQSGSRHQKFVVRLSSGQTLLIAHNIDLAKRVSGLGEGDTVTFSGEYEWSAKGGALHWTHRDPDGSHPTGWIQHHGRT YQ
Sequences:
>Translated_162_residues MSERSRIKNLLVVAAMLLAGYFWFTGQGQHSTTSNKASNAIQSRNQRPSPDKSDTVIAKAFANRQSNLQVSGEGVVIKLL PDYQSGSRHQKFVVRLSSGQTLLIAHNIDLAKRVSGLGEGDTVTFSGEYEWSAKGGALHWTHRDPDGSHPTGWIQHHGRT YQ >Mature_161_residues SERSRIKNLLVVAAMLLAGYFWFTGQGQHSTTSNKASNAIQSRNQRPSPDKSDTVIAKAFANRQSNLQVSGEGVVIKLLP DYQSGSRHQKFVVRLSSGQTLLIAHNIDLAKRVSGLGEGDTVTFSGEYEWSAKGGALHWTHRDPDGSHPTGWIQHHGRTY Q
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17842; Mature: 17711
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERSRIKNLLVVAAMLLAGYFWFTGQGQHSTTSNKASNAIQSRNQRPSPDKSDTVIAKA CCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH FANRQSNLQVSGEGVVIKLLPDYQSGSRHQKFVVRLSSGQTLLIAHNIDLAKRVSGLGEG HHCCCCCEEECCCCEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCHHHHHCCCCCC DTVTFSGEYEWSAKGGALHWTHRDPDGSHPTGWIQHHGRTYQ CEEEECCCEEECCCCCEEEECCCCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure SERSRIKNLLVVAAMLLAGYFWFTGQGQHSTTSNKASNAIQSRNQRPSPDKSDTVIAKA CHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH FANRQSNLQVSGEGVVIKLLPDYQSGSRHQKFVVRLSSGQTLLIAHNIDLAKRVSGLGEG HHCCCCCEEECCCCEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCHHHHHCCCCCC DTVTFSGEYEWSAKGGALHWTHRDPDGSHPTGWIQHHGRTYQ CEEEECCCEEECCCCCEEEECCCCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA