Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
---|---|
Accession | NC_008639 |
Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is yqeW [H]
Identifier: 119356934
GI number: 119356934
Start: 1258441
End: 1260141
Strand: Direct
Name: yqeW [H]
Synonym: Cpha266_1114
Alternate gene names: 119356934
Gene position: 1258441-1260141 (Clockwise)
Preceding gene: 119356916
Following gene: 119356935
Centisome position: 40.16
GC content: 49.32
Gene sequence:
>1701_bases ATGCAGGACGGTCACTCATGGTTAAGCATTTCCATTTCTTTCGCAGGCGGTCTTGCCCTTTTTCTTTTTGGAATACGGGC AATGAGCGCCGGATTGAAAAAGGTTGCCGCCAAAAAAATGGAATCATTTGTTGCTACGATATTGAACAACCCCGTCTATG GACTGATTGCCGGGGCATTTGCCACCATGATTGTGCAGAGCAGCAGTACGATCGTCGTCATACTTGTCGGACTTGTGCAG TCACAGCTCATGACCTCCACCCAGGCGCTTGCCGTTCTTTTTGGCGCCGAAATAGGGACGACGGCGTTGACACAGTTGAT TGCTTTCGGGGTTCACGAGTATGGCCCGCTGTTTTTTGCTGCTGGTTTTCTTTTAAACTCCATAGCAAAGAGAGAGGGGA TTCGATACACTGGCGAAGCCCTTTGCGGCTTGGGTCTGCTCTTGTTTGGCCTGCATCTTATGACCGCGTCAACGACACCG CTGCTCGGCTACCAGCCATTTATAGCGCTTTTGCATAATCTCCGCAATCCGCTTGTCAGCGTTCTTGTCGGCTTGTGCTG TACCGCCATTCTGCAAAGCAGCGGAGCTTTTATCGGGATTGTCATTACTCTTGCACAGCAGGGAGTGCTGACGCTTGAAG CCGGCATGCCGCTGTTGCTGGGTGCCAACATCGGAACCTGTATTACCGGCTTTCTTGCATCTGCAGGTCTTTTTCGTGCC GCAAAGCGGGTCGCCCTGGCGCAACTGATTTTTAATGCAACAGGGGTCGTTCTTTTTATAGCCATTATTCCCTGGTATGC GGATGTGATCCGTTTCATCTCTTTTTCCGTGCCCGATGGTTCATCGGTAATGCTTGCGCATGATGTACCCCGACAGCTTG CCAATGCCCATACGGTTTATAATATTCTGATGGCACTGTTATTTCTTCCGCTGCTGCCTCCTTTTTCAAGGCTGCTTATC CGCCTTCTACCTGATAATCCCGATGAAATCAGACAGGTGCCCTCCGTCTGGTACATTCAGGAGTCGGCACTTGCAACTCC ATCGCTTGCCCTGAGCTATGCGAGAGCGGAAGTTGCCCGTATGAGCAGGATACTGGAGAGAATGGTCAGCGCATTGCTCT ATCCGTTCATAAGCGTCGAAAAGGGTAAGGATAGCGTTTTTGCGGAGCTCTCCGTTCTTGAGGGAATCACGATGAGAGAG GAGAAGCTCGATTTTCTTGAATCGAGCGTATCGGAGTATCTCATAGCCATCAGTCGTCGGGAGCTCAATGAAGAGGAGTC GCGGCAGGTTTTTGCCTTGATGAATATCGTGAAAAATCAGGAATCGACCGGGGATGTGATCGAAAAATTAATCGGCAAAT ATCTTCAGGGCAACACGGTATTTGTGAAAGGGCTTACGGAGGAGGGCAAAACAGAGCTTGTGCTTCTGCATCGGCTCGTG TGCGCTGAAATTGAAACGCTTACCGAGGCATTGCTTAAGATGAAAAAAGAAACGGTATCAGAATCCATCCTGTGCGATAC GGTTTTTCTGTCGCAGGTCAGCCAGGCAGAAAAGGCTCATCTGAAAAGAGTTCAGTCTGTTGCAGAATCAGGAGTTACGC ATAACATCCACATGGATCTGCTTGACGTTTTAAAACAGGTGCATCACTACAATAAAAATTGTGCTCGCATATTGTCGGAA TTCTCATCTTCGGCAAAGTGA
Upstream 100 bases:
>100_bases CAGTCGAAGACTTGAAGAAGTGTTTCTTTACAGGCAGAAAAAAACAGACGAGCTTCTCGGGCGGACAGACAAATTCTCTT AATCGAATAGAGGTTGCATT
Downstream 100 bases:
>100_bases TTTTTTGTGTTTTTCCGAACTATTTGTTATCTACAGAGGCATTACTTGTTCTTTCTGTTCGTAGCTGGTGCCGGCTTAAA AGCCGGAGAATAGGGAAGTA
Product: Na+/Pi-cotransporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 566; Mature: 566
Protein sequence:
>566_residues MQDGHSWLSISISFAGGLALFLFGIRAMSAGLKKVAAKKMESFVATILNNPVYGLIAGAFATMIVQSSSTIVVILVGLVQ SQLMTSTQALAVLFGAEIGTTALTQLIAFGVHEYGPLFFAAGFLLNSIAKREGIRYTGEALCGLGLLLFGLHLMTASTTP LLGYQPFIALLHNLRNPLVSVLVGLCCTAILQSSGAFIGIVITLAQQGVLTLEAGMPLLLGANIGTCITGFLASAGLFRA AKRVALAQLIFNATGVVLFIAIIPWYADVIRFISFSVPDGSSVMLAHDVPRQLANAHTVYNILMALLFLPLLPPFSRLLI RLLPDNPDEIRQVPSVWYIQESALATPSLALSYARAEVARMSRILERMVSALLYPFISVEKGKDSVFAELSVLEGITMRE EKLDFLESSVSEYLIAISRRELNEEESRQVFALMNIVKNQESTGDVIEKLIGKYLQGNTVFVKGLTEEGKTELVLLHRLV CAEIETLTEALLKMKKETVSESILCDTVFLSQVSQAEKAHLKRVQSVAESGVTHNIHMDLLDVLKQVHHYNKNCARILSE FSSSAK
Sequences:
>Translated_566_residues MQDGHSWLSISISFAGGLALFLFGIRAMSAGLKKVAAKKMESFVATILNNPVYGLIAGAFATMIVQSSSTIVVILVGLVQ SQLMTSTQALAVLFGAEIGTTALTQLIAFGVHEYGPLFFAAGFLLNSIAKREGIRYTGEALCGLGLLLFGLHLMTASTTP LLGYQPFIALLHNLRNPLVSVLVGLCCTAILQSSGAFIGIVITLAQQGVLTLEAGMPLLLGANIGTCITGFLASAGLFRA AKRVALAQLIFNATGVVLFIAIIPWYADVIRFISFSVPDGSSVMLAHDVPRQLANAHTVYNILMALLFLPLLPPFSRLLI RLLPDNPDEIRQVPSVWYIQESALATPSLALSYARAEVARMSRILERMVSALLYPFISVEKGKDSVFAELSVLEGITMRE EKLDFLESSVSEYLIAISRRELNEEESRQVFALMNIVKNQESTGDVIEKLIGKYLQGNTVFVKGLTEEGKTELVLLHRLV CAEIETLTEALLKMKKETVSESILCDTVFLSQVSQAEKAHLKRVQSVAESGVTHNIHMDLLDVLKQVHHYNKNCARILSE FSSSAK >Mature_566_residues MQDGHSWLSISISFAGGLALFLFGIRAMSAGLKKVAAKKMESFVATILNNPVYGLIAGAFATMIVQSSSTIVVILVGLVQ SQLMTSTQALAVLFGAEIGTTALTQLIAFGVHEYGPLFFAAGFLLNSIAKREGIRYTGEALCGLGLLLFGLHLMTASTTP LLGYQPFIALLHNLRNPLVSVLVGLCCTAILQSSGAFIGIVITLAQQGVLTLEAGMPLLLGANIGTCITGFLASAGLFRA AKRVALAQLIFNATGVVLFIAIIPWYADVIRFISFSVPDGSSVMLAHDVPRQLANAHTVYNILMALLFLPLLPPFSRLLI RLLPDNPDEIRQVPSVWYIQESALATPSLALSYARAEVARMSRILERMVSALLYPFISVEKGKDSVFAELSVLEGITMRE EKLDFLESSVSEYLIAISRRELNEEESRQVFALMNIVKNQESTGDVIEKLIGKYLQGNTVFVKGLTEEGKTELVLLHRLV CAEIETLTEALLKMKKETVSESILCDTVFLSQVSQAEKAHLKRVQSVAESGVTHNIHMDLLDVLKQVHHYNKNCARILSE FSSSAK
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjbB [H]
Homologues:
Organism=Escherichia coli, GI1790451, Length=467, Percent_Identity=25.6959314775161, Blast_Score=117, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 61506; Mature: 61506
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDGHSWLSISISFAGGLALFLFGIRAMSAGLKKVAAKKMESFVATILNNPVYGLIAGAF CCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ATMIVQSSSTIVVILVGLVQSQLMTSTQALAVLFGAEIGTTALTQLIAFGVHEYGPLFFA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH AGFLLNSIAKREGIRYTGEALCGLGLLLFGLHLMTASTTPLLGYQPFIALLHNLRNPLVS HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH VLVGLCCTAILQSSGAFIGIVITLAQQGVLTLEAGMPLLLGANIGTCITGFLASAGLFRA HHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCEEECCCHHHHHHHHHHHHHHHHH AKRVALAQLIFNATGVVLFIAIIPWYADVIRFISFSVPDGSSVMLAHDVPRQLANAHTVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHH NILMALLFLPLLPPFSRLLIRLLPDNPDEIRQVPSVWYIQESALATPSLALSYARAEVAR HHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCEEEEHHHHCCHHHHHHHHHHHHHH MSRILERMVSALLYPFISVEKGKDSVFAELSVLEGITMREEKLDFLESSVSEYLIAISRR HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH ELNEEESRQVFALMNIVKNQESTGDVIEKLIGKYLQGNTVFVKGLTEEGKTELVLLHRLV HCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHH CAEIETLTEALLKMKKETVSESILCDTVFLSQVSQAEKAHLKRVQSVAESGVTHNIHMDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LDVLKQVHHYNKNCARILSEFSSSAK HHHHHHHHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure MQDGHSWLSISISFAGGLALFLFGIRAMSAGLKKVAAKKMESFVATILNNPVYGLIAGAF CCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH ATMIVQSSSTIVVILVGLVQSQLMTSTQALAVLFGAEIGTTALTQLIAFGVHEYGPLFFA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH AGFLLNSIAKREGIRYTGEALCGLGLLLFGLHLMTASTTPLLGYQPFIALLHNLRNPLVS HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH VLVGLCCTAILQSSGAFIGIVITLAQQGVLTLEAGMPLLLGANIGTCITGFLASAGLFRA HHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCEEECCCHHHHHHHHHHHHHHHHH AKRVALAQLIFNATGVVLFIAIIPWYADVIRFISFSVPDGSSVMLAHDVPRQLANAHTVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHH NILMALLFLPLLPPFSRLLIRLLPDNPDEIRQVPSVWYIQESALATPSLALSYARAEVAR HHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHCCCCEEEEHHHHCCHHHHHHHHHHHHHH MSRILERMVSALLYPFISVEKGKDSVFAELSVLEGITMREEKLDFLESSVSEYLIAISRR HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH ELNEEESRQVFALMNIVKNQESTGDVIEKLIGKYLQGNTVFVKGLTEEGKTELVLLHRLV HCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHH CAEIETLTEALLKMKKETVSESILCDTVFLSQVSQAEKAHLKRVQSVAESGVTHNIHMDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH LDVLKQVHHYNKNCARILSEFSSSAK HHHHHHHHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9023197; 9384377 [H]