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The map label for this gene is ybbC [H]

Identifier: 119356895

GI number: 119356895

Start: 1215460

End: 1216677

Strand: Direct

Name: ybbC [H]

Synonym: Cpha266_1074

Alternate gene names: 119356895

Gene position: 1215460-1216677 (Clockwise)

Preceding gene: 119356894

Following gene: 119356900

Centisome position: 38.78

GC content: 49.67

Gene sequence:

>1218_bases
ATGGTTCTCTTCAGACTGGTTTCATGGTTGATGATGGTGCTGCTTTTTTTCTGCGCTACGGCTTTTGGCAGAACGTTACG
CACCGGGCTCGATGTTCTCGATGCTTCCGCATGCCGGGAACTTGAGGGAAAACGGGTAGGGTTGATTACCAATGCCGGAG
GGATAAGCGCAAAAGGGGAGAGTAATTATCGATTGATGCTTCGTCATGGGGTGAATCTGAAATACCTTATGGCTCCGGAG
CATGGTTTTTCAGCCAGAGCGGATGCCGGCAGGAGGCTGGGGGGAACGGTTGTTGATGATACCCTGAAGGTTTATTCACT
CTACGGAGCATCAAAAAAGCCTGATATCGGGCAACTTAAATCGGTCGATGTGCTGGTTTTCGATCTTCAGGATATCGGCG
CCCGATGTTACACCTATATTTCAACCATGAAAAATGCCATGGAGGCCTGTTCGGAGGCGGGAGTGGCGTTCATGGTTCTC
GACAGGCCAAATCCGATTATGCCTCTTTCTCCATCCGGATTCATGGTTGACAAGGGGTATGAGTCGTTTGTCGGGGCGGT
AGATGTGCCGTTTATTCATGCCATGACGGTTGGCGAGATAGCTCTTTTTCTGAAAAACACCAGATTCAGGACGCTTGATC
TCAAGATTATTCCCATGCAGGGATATCGCAGAGGGACTCTTGTCGATGAATATGAGGGATTTCGGTTTGTCAGTCCATCG
CCGAACATAAACAGTACGGTTGCGGCGCTTGTCTATCCTGCGACTGTTTTTCTTGAGGCTACAAAAGTCAGTGAGGGCAG
GGGAACCGATGCCCCTTTCCTTCAGTTCGGCGCTCCGTTTATCGATTCGGCAAGACTTTTGCAGGAGGTTCAGGCTTACC
GGTTGCCGGGAGTCGGGTTTTCTTCTGTTCAATTTATCCCGAAGTCCGGAAAATTCAGGAATGAGCAGTGTTTCGGTTTG
AAGCTGAGGGTTTCAGACAGGAAGCTGTTTTCCCCGTTTACCACTTCCGCAGTCCTCCTCCTTGCACTGCAAAAGCTCTA
TCCATCGAGTCTTGGGTTGAAGGAGGGTAGCGTTTTTTTTGATCGTCTTGCCGGGACTCCGCTCTATCGGGAGATGATTC
TTAAACAGGTGCCTCTTGACGCTATTATATCGGCAAGCCGCAACGATGTGCAGGAGTTCGAACGACTCTATCCATCACGT
TTTATCTATCCTGAATAG

Upstream 100 bases:

>100_bases
GGAACTTATGGCGAATCCGGCATGTGTTTTTGCTGCTGATGCCCGACAATAGAAGGCTTTTCGGGTGATCTGGTTCAGGA
ACTATCAGTTATTTTGATCT

Downstream 100 bases:

>100_bases
TAGCGGCTGTCGCTGTTTATTTATTCCGCGATCCGGCTGTTTCGTTGGCTGGTGCTTGAAATTTTCATCCCCGTTTGTCG
CGATTCCGGTTTTCTCCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MVLFRLVSWLMMVLLFFCATAFGRTLRTGLDVLDASACRELEGKRVGLITNAGGISAKGESNYRLMLRHGVNLKYLMAPE
HGFSARADAGRRLGGTVVDDTLKVYSLYGASKKPDIGQLKSVDVLVFDLQDIGARCYTYISTMKNAMEACSEAGVAFMVL
DRPNPIMPLSPSGFMVDKGYESFVGAVDVPFIHAMTVGEIALFLKNTRFRTLDLKIIPMQGYRRGTLVDEYEGFRFVSPS
PNINSTVAALVYPATVFLEATKVSEGRGTDAPFLQFGAPFIDSARLLQEVQAYRLPGVGFSSVQFIPKSGKFRNEQCFGL
KLRVSDRKLFSPFTTSAVLLLALQKLYPSSLGLKEGSVFFDRLAGTPLYREMILKQVPLDAIISASRNDVQEFERLYPSR
FIYPE

Sequences:

>Translated_405_residues
MVLFRLVSWLMMVLLFFCATAFGRTLRTGLDVLDASACRELEGKRVGLITNAGGISAKGESNYRLMLRHGVNLKYLMAPE
HGFSARADAGRRLGGTVVDDTLKVYSLYGASKKPDIGQLKSVDVLVFDLQDIGARCYTYISTMKNAMEACSEAGVAFMVL
DRPNPIMPLSPSGFMVDKGYESFVGAVDVPFIHAMTVGEIALFLKNTRFRTLDLKIIPMQGYRRGTLVDEYEGFRFVSPS
PNINSTVAALVYPATVFLEATKVSEGRGTDAPFLQFGAPFIDSARLLQEVQAYRLPGVGFSSVQFIPKSGKFRNEQCFGL
KLRVSDRKLFSPFTTSAVLLLALQKLYPSSLGLKEGSVFFDRLAGTPLYREMILKQVPLDAIISASRNDVQEFERLYPSR
FIYPE
>Mature_405_residues
MVLFRLVSWLMMVLLFFCATAFGRTLRTGLDVLDASACRELEGKRVGLITNAGGISAKGESNYRLMLRHGVNLKYLMAPE
HGFSARADAGRRLGGTVVDDTLKVYSLYGASKKPDIGQLKSVDVLVFDLQDIGARCYTYISTMKNAMEACSEAGVAFMVL
DRPNPIMPLSPSGFMVDKGYESFVGAVDVPFIHAMTVGEIALFLKNTRFRTLDLKIIPMQGYRRGTLVDEYEGFRFVSPS
PNINSTVAALVYPATVFLEATKVSEGRGTDAPFLQFGAPFIDSARLLQEVQAYRLPGVGFSSVQFIPKSGKFRNEQCFGL
KLRVSDRKLFSPFTTSAVLLLALQKLYPSSLGLKEGSVFFDRLAGTPLYREMILKQVPLDAIISASRNDVQEFERLYPSR
FIYPE

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 44877; Mature: 44877

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLFRLVSWLMMVLLFFCATAFGRTLRTGLDVLDASACRELEGKRVGLITNAGGISAKGE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
SNYRLMLRHGVNLKYLMAPEHGFSARADAGRRLGGTVVDDTLKVYSLYGASKKPDIGQLK
CCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCC
SVDVLVFDLQDIGARCYTYISTMKNAMEACSEAGVAFMVLDRPNPIMPLSPSGFMVDKGY
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEECCCCCEEECCH
ESFVGAVDVPFIHAMTVGEIALFLKNTRFRTLDLKIIPMQGYRRGTLVDEYEGFRFVSPS
HHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEECCC
PNINSTVAALVYPATVFLEATKVSEGRGTDAPFLQFGAPFIDSARLLQEVQAYRLPGVGF
CCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCC
SSVQFIPKSGKFRNEQCFGLKLRVSDRKLFSPFTTSAVLLLALQKLYPSSLGLKEGSVFF
CCEEEECCCCCCCCCCEEEEEEEECCCHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHH
DRLAGTPLYREMILKQVPLDAIISASRNDVQEFERLYPSRFIYPE
HHHCCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVLFRLVSWLMMVLLFFCATAFGRTLRTGLDVLDASACRELEGKRVGLITNAGGISAKGE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
SNYRLMLRHGVNLKYLMAPEHGFSARADAGRRLGGTVVDDTLKVYSLYGASKKPDIGQLK
CCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCC
SVDVLVFDLQDIGARCYTYISTMKNAMEACSEAGVAFMVLDRPNPIMPLSPSGFMVDKGY
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEECCCCCEEECCH
ESFVGAVDVPFIHAMTVGEIALFLKNTRFRTLDLKIIPMQGYRRGTLVDEYEGFRFVSPS
HHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCEEECCC
PNINSTVAALVYPATVFLEATKVSEGRGTDAPFLQFGAPFIDSARLLQEVQAYRLPGVGF
CCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCC
SSVQFIPKSGKFRNEQCFGLKLRVSDRKLFSPFTTSAVLLLALQKLYPSSLGLKEGSVFF
CCEEEECCCCCCCCCCEEEEEEEECCCHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHH
DRLAGTPLYREMILKQVPLDAIISASRNDVQEFERLYPSRFIYPE
HHHCCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]