Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
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Accession | NC_008639 |
Length | 3,133,902 |
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The map label for this gene is 119356889
Identifier: 119356889
GI number: 119356889
Start: 1209056
End: 1209574
Strand: Direct
Name: 119356889
Synonym: Cpha266_1068
Alternate gene names: NA
Gene position: 1209056-1209574 (Clockwise)
Preceding gene: 119356887
Following gene: 119356890
Centisome position: 38.58
GC content: 49.71
Gene sequence:
>519_bases ATGAGTGAACATGAAAAGCCCGATGTCCCGGAAATCTTTACGAAAAAGGCATCCAGGCAGCTTGCTCCACGGGAGCTGGA AGAGCGTATCCTGAAGTTTCTCGCATCACGTCGGCTTTGTGTGCTTTCGACCTGTCGGGATAACGTGCCGAGATCGACGC CCATTCTTTTCTGCTCGAAAGGGTTCACTCTTTTCATGGCTGGAGAACCCGGCCTCAAGCTTGGAAATATCAATCTGAAC CCTAACGTGAGCGTGGGCATTTTTGACCCGAAATCCGAATTTTCAAATGACTTGAATGATATTACCGGTTTGCAGATAAG TGGTCGTGCGAGGCTCATCGGTAAGTCGGATCCCGGCTTCGAGGATGCGTTCAACCTTTTTTTACGTCCTCAAGCTTGGT CAGAACACTGGTTTGGCAAGATGATCGAGGTGATACCCGACAAGATTGAGCTGCTCTCCATGGCGCTCAAACTTGAAGAT TATGCCGCACGGCAGATCTGGACTCGGTCAGTTCTCTAA
Upstream 100 bases:
>100_bases GTTCGCATCGGCAACCTGCAAAAATCATTGCAGATAGTCGTAAAATTTGAAGATCTTCAAGAGAAAACGTTCTCTGTAAT AAATAGAAAAGGGGGAGGTC
Downstream 100 bases:
>100_bases CGAAATATTGACTAAAAATCGGGAACGACTCCTGACATTAAAGCCTGAAGTCAGAATGTTCTTGATGATTGTTGTCTGAG CTTATGATCCGTTTTTCATT
Product: pyridoxamine 5'-phosphate oxidase-related, FMN-binding
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSEHEKPDVPEIFTKKASRQLAPRELEERILKFLASRRLCVLSTCRDNVPRSTPILFCSKGFTLFMAGEPGLKLGNINLN PNVSVGIFDPKSEFSNDLNDITGLQISGRARLIGKSDPGFEDAFNLFLRPQAWSEHWFGKMIEVIPDKIELLSMALKLED YAARQIWTRSVL
Sequences:
>Translated_172_residues MSEHEKPDVPEIFTKKASRQLAPRELEERILKFLASRRLCVLSTCRDNVPRSTPILFCSKGFTLFMAGEPGLKLGNINLN PNVSVGIFDPKSEFSNDLNDITGLQISGRARLIGKSDPGFEDAFNLFLRPQAWSEHWFGKMIEVIPDKIELLSMALKLED YAARQIWTRSVL >Mature_171_residues SEHEKPDVPEIFTKKASRQLAPRELEERILKFLASRRLCVLSTCRDNVPRSTPILFCSKGFTLFMAGEPGLKLGNINLNP NVSVGIFDPKSEFSNDLNDITGLQISGRARLIGKSDPGFEDAFNLFLRPQAWSEHWFGKMIEVIPDKIELLSMALKLEDY AARQIWTRSVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19495; Mature: 19364
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHEKPDVPEIFTKKASRQLAPRELEERILKFLASRRLCVLSTCRDNVPRSTPILFCSK CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCEEEECC GFTLFMAGEPGLKLGNINLNPNVSVGIFDPKSEFSNDLNDITGLQISGRARLIGKSDPGF CCEEEEECCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHCCEEECCCEEEECCCCCCH EDAFNLFLRPQAWSEHWFGKMIEVIPDKIELLSMALKLEDYAARQIWTRSVL HHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEHEKPDVPEIFTKKASRQLAPRELEERILKFLASRRLCVLSTCRDNVPRSTPILFCSK CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCEEEECC GFTLFMAGEPGLKLGNINLNPNVSVGIFDPKSEFSNDLNDITGLQISGRARLIGKSDPGF CCEEEEECCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHCCEEECCCEEEECCCCCCH EDAFNLFLRPQAWSEHWFGKMIEVIPDKIELLSMALKLEDYAARQIWTRSVL HHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA