Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119356873

Identifier: 119356873

GI number: 119356873

Start: 1185453

End: 1185884

Strand: Direct

Name: 119356873

Synonym: Cpha266_1046

Alternate gene names: NA

Gene position: 1185453-1185884 (Clockwise)

Preceding gene: 119356872

Following gene: 119356874

Centisome position: 37.83

GC content: 44.21

Gene sequence:

>432_bases
ATGAAAAAAGAAGTGTTTATGAAATTCTTTTCCGAAGAAAGCCCTGTTCTGCTGTTATGTCGCGCGGCGCTTTCGTTTTC
ATGGATATATCAAGGTGCCGTTCCGAAAATAGTCTGCCAGAGTACTGGCGAGATTGATCTGCTTGGTCATGTGATTCCCG
TTTATCAATGGGCATGCATGGCTGTGACCTGGATGGGGGTTGTCGAGATACTCTTTGGTATCTATCTTCTTGTTGCCCGA
AAGAGTTGGGCGTTTTGGCTCAATGTGTTAACTTTATTCAGCCTTTTAATTTATGTGGCACTCTTTGAACCGGAACTGTT
CACGCTTCCGTTTAATCCCCTGACGCTCAATATTGCACTCGTTGCGTTGTCGCTTATTGCTATCAAGGAACTCAATAAAA
ACGGAAATGCACATGATGCCGCATCGCATTGA

Upstream 100 bases:

>100_bases
TGTTTATATAACTGCTGGCTGCAAAGCGAGGCGGGGTTGCAAACGAAGCTGCCGAATCGCAGGGTAACGCTTCAGAGTGT
TTTTTTGTGGTGTTTATATT

Downstream 100 bases:

>100_bases
AAAGAATTTGGGCGGGGTAGCAGAGCTCTTTTTGCGAGTTTCAGTGACGGTCATCACCATTGCGGTTTTTCTTGGAGCAA
TCGGCGCCTTGCTCGGTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKKEVFMKFFSEESPVLLLCRAALSFSWIYQGAVPKIVCQSTGEIDLLGHVIPVYQWACMAVTWMGVVEILFGIYLLVAR
KSWAFWLNVLTLFSLLIYVALFEPELFTLPFNPLTLNIALVALSLIAIKELNKNGNAHDAASH

Sequences:

>Translated_143_residues
MKKEVFMKFFSEESPVLLLCRAALSFSWIYQGAVPKIVCQSTGEIDLLGHVIPVYQWACMAVTWMGVVEILFGIYLLVAR
KSWAFWLNVLTLFSLLIYVALFEPELFTLPFNPLTLNIALVALSLIAIKELNKNGNAHDAASH
>Mature_143_residues
MKKEVFMKFFSEESPVLLLCRAALSFSWIYQGAVPKIVCQSTGEIDLLGHVIPVYQWACMAVTWMGVVEILFGIYLLVAR
KSWAFWLNVLTLFSLLIYVALFEPELFTLPFNPLTLNIALVALSLIAIKELNKNGNAHDAASH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16093; Mature: 16093

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEVFMKFFSEESPVLLLCRAALSFSWIYQGAVPKIVCQSTGEIDLLGHVIPVYQWACM
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHH
AVTWMGVVEILFGIYLLVARKSWAFWLNVLTLFSLLIYVALFEPELFTLPFNPLTLNIAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH
VALSLIAIKELNKNGNAHDAASH
HHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKKEVFMKFFSEESPVLLLCRAALSFSWIYQGAVPKIVCQSTGEIDLLGHVIPVYQWACM
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHH
AVTWMGVVEILFGIYLLVARKSWAFWLNVLTLFSLLIYVALFEPELFTLPFNPLTLNIAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHH
VALSLIAIKELNKNGNAHDAASH
HHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA