Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
---|---|
Accession | NC_008639 |
Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356809
Identifier: 119356809
GI number: 119356809
Start: 1123130
End: 1123969
Strand: Direct
Name: 119356809
Synonym: Cpha266_0982
Alternate gene names: NA
Gene position: 1123130-1123969 (Clockwise)
Preceding gene: 119356807
Following gene: 119356811
Centisome position: 35.84
GC content: 46.07
Gene sequence:
>840_bases ATGCTTCTGGTTATTCAGGTTTTTCTTGCAGGATGTGGCGATTTCGAGACGGTGAAACGTGACGATGTTCCTGCTGAAGA GATAGCTCTGACCCCCGAACTGCTCAGCCTTTACAAGGAGGTGGCCAAAGCATCACCATTTGTCAAGTCTGTTGAGGGGT ATGCGGATATCTGGATTAAAACACCCAAAAAGTCACAAAAAGTATATTGCAGTATTCAGCTTCAGAGGGCGCGTGACGCG CGCTTGATTATAAGCGCAGGTTTGCTTGGCTGGCCGGTTGCCGATGTGTATTTCAGTCCTGACTCACTCTATGTTCATGA TATACTTAACAATACACTGCTTACCGGTCGCAATACGCAGGAAAATCTTGGCAAACTTCTTGGCGTTGATTCCGGATATG AGATGTTTTCCGAATCACTTCTTGGCTTGATAAAAATCAAGGAGTCCGTAAGCGCACTGCGTTCGGTTAAAAAAAATGGT GATAAACTGATGTTTACGTTTAAAAGCGGATCGGGAACCAGGGAGGCCTTAATCGATGCTTCAGCAAAAACACTGACGGA TCTGTATCTGCGGGATTCAGCAGGGCAGAAAACCGCCGAATTGCATTTCCGTGAATTTCAGTCATATTCAGTTGATGACA AGTCCGTACTTGTTCCCGGAGAAATCGAGATGATGCGCTATGAAAAAAGCAGCAAGGGAGCGGTAGTCAATACGCTGCTG ATTGTCTATGACGAGAGGAGCTTCAACAAACCGTCAGAATCCATAGAGTTCAGGAGGCCTGAAAATGTAAAGCTCATCAG GCTTGACGATGTGGTTAAACTTCCCTGGCTGGAGCGATGA
Upstream 100 bases:
>100_bases GGAGAGGAAATTTTGTCTTTTTTTCCCCCAATCCGAAAAGTCTATCATTAAATTTAATAAAAAGCAAAAAGTCTACATGA AGAGAGGTATTACGGTCGTC
Downstream 100 bases:
>100_bases TAACCGTATGAAACAGCCCCGTCTGTTCTGACGGGGCTGTTGTTGTGAACTGACCGTTTGCGGGGGGAGTTACGATGATC TTTGATACCGGTGCTGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MLLVIQVFLAGCGDFETVKRDDVPAEEIALTPELLSLYKEVAKASPFVKSVEGYADIWIKTPKKSQKVYCSIQLQRARDA RLIISAGLLGWPVADVYFSPDSLYVHDILNNTLLTGRNTQENLGKLLGVDSGYEMFSESLLGLIKIKESVSALRSVKKNG DKLMFTFKSGSGTREALIDASAKTLTDLYLRDSAGQKTAELHFREFQSYSVDDKSVLVPGEIEMMRYEKSSKGAVVNTLL IVYDERSFNKPSESIEFRRPENVKLIRLDDVVKLPWLER
Sequences:
>Translated_279_residues MLLVIQVFLAGCGDFETVKRDDVPAEEIALTPELLSLYKEVAKASPFVKSVEGYADIWIKTPKKSQKVYCSIQLQRARDA RLIISAGLLGWPVADVYFSPDSLYVHDILNNTLLTGRNTQENLGKLLGVDSGYEMFSESLLGLIKIKESVSALRSVKKNG DKLMFTFKSGSGTREALIDASAKTLTDLYLRDSAGQKTAELHFREFQSYSVDDKSVLVPGEIEMMRYEKSSKGAVVNTLL IVYDERSFNKPSESIEFRRPENVKLIRLDDVVKLPWLER >Mature_279_residues MLLVIQVFLAGCGDFETVKRDDVPAEEIALTPELLSLYKEVAKASPFVKSVEGYADIWIKTPKKSQKVYCSIQLQRARDA RLIISAGLLGWPVADVYFSPDSLYVHDILNNTLLTGRNTQENLGKLLGVDSGYEMFSESLLGLIKIKESVSALRSVKKNG DKLMFTFKSGSGTREALIDASAKTLTDLYLRDSAGQKTAELHFREFQSYSVDDKSVLVPGEIEMMRYEKSSKGAVVNTLL IVYDERSFNKPSESIEFRRPENVKLIRLDDVVKLPWLER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31355; Mature: 31355
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLVIQVFLAGCGDFETVKRDDVPAEEIALTPELLSLYKEVAKASPFVKSVEGYADIWIK CEEEEEEHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCEEEEEE TPKKSQKVYCSIQLQRARDARLIISAGLLGWPVADVYFSPDSLYVHDILNNTLLTGRNTQ CCCCCCEEEEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCEEHHHHHCCCEECCCCCH ENLGKLLGVDSGYEMFSESLLGLIKIKESVSALRSVKKNGDKLMFTFKSGSGTREALIDA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHC SAKTLTDLYLRDSAGQKTAELHFREFQSYSVDDKSVLVPGEIEMMRYEKSSKGAVVNTLL CHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCCCEECCCCEEEEEECCCCCCCEEEEEE IVYDERSFNKPSESIEFRRPENVKLIRLDDVVKLPWLER EEEECCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCC >Mature Secondary Structure MLLVIQVFLAGCGDFETVKRDDVPAEEIALTPELLSLYKEVAKASPFVKSVEGYADIWIK CEEEEEEHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCEEEEEE TPKKSQKVYCSIQLQRARDARLIISAGLLGWPVADVYFSPDSLYVHDILNNTLLTGRNTQ CCCCCCEEEEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCEEHHHHHCCCEECCCCCH ENLGKLLGVDSGYEMFSESLLGLIKIKESVSALRSVKKNGDKLMFTFKSGSGTREALIDA HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHC SAKTLTDLYLRDSAGQKTAELHFREFQSYSVDDKSVLVPGEIEMMRYEKSSKGAVVNTLL CHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCCCEECCCCEEEEEECCCCCCCEEEEEE IVYDERSFNKPSESIEFRRPENVKLIRLDDVVKLPWLER EEEECCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA