Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
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Accession | NC_008609 |
Length | 4,008,000 |
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The map label for this gene is 118581068
Identifier: 118581068
GI number: 118581068
Start: 2891868
End: 2893427
Strand: Direct
Name: 118581068
Synonym: Ppro_2657
Alternate gene names: NA
Gene position: 2891868-2893427 (Clockwise)
Preceding gene: 118581065
Following gene: 118581069
Centisome position: 72.15
GC content: 52.12
Gene sequence:
>1560_bases ATGATGCGAAGCGTATTGAAATCACTTCTGAAACCTGACGCATACCCGGAGACGACCACCAAGGTTGAGCTGCTCCAGAC ACACGTTTCATGGATCTTCCTGACCGACAGCCACGCCTACAAGATTAAGAAGCCGGTCGACCTCGGCTTTCTCAATTTTT CCACCATAGATCGTCGACGTTTTTATTGCAACGAGGAGATCAGATACAACCGACGCCTCTGTCCCGATATCTATATCGGA GTAGTTGAACTGCGCCAGACGAATGGATGTGCCAGCTTTCGGGACCAGGGACAGATTATCGACTACGCCGTCAAGATGAA GCGTCTACCGGCGGAAAGCATGCTGGATCGCCTGGTAATGAATAACACCGTCTCGATCGCCGAGATACGGGATGTCGCCC GGGTGATAGCCGAGTTTCACCATACCCTGCCTACTTCGCCCGCCATCTCGGAATACGGCCGTCCCGACCGGATTCGATTT AACTGGATCGAAAATTTTGAGCAAATTCTTCCCTTCGAGAGCTCGACTCTGCCAGCACCGGAACGCCAACAGATCCGATC ATGGGTTTTGTCGTTCATGGAACAGAATGCCGATCTTTTCGCCGCAAGGATTGATAACGGTTTTATCCGGGAATGTGACG GGGATATCCACCTCGAGAATATCTGCCTGACCGGTGGAAGGGTCTATATCTTCGACTGCATCGAATTCAGTGAGCGCTTC CGCTGCTGCGACACCACTGCGGACCTGGCTTTTCTGCTTATGGACCTGGATTTTCGCGACAGAAACGACCTATCTGCGGA AGTGCTCGCGACCTATAGTGACGTTTCGGGTGACAACCTCGTCCCCGCCCTGCTCAACTTCTACAAGATATACAGGGCCT TTGTCCGGGGCAAAGTCGAGAGCCTGCACTCCATTGACGCCGACATGAATGAGCAGCAACGGAACAACGCCATAACGAGG GCTATTAGATATTTCAGACTTGCACGTGGTTACATTGAACGCAGCAGGCTTCGCCCAACCCTCTTCATTACCTGCGGTTT GATGGGGTGCGGCAAGAGTACGCTTGCCGCCCAACTTTCCTTCGAACTGGGCATCCCCAGTTACAACTCCGACACTATTC GCAAACAAATGGCCGGCATTTCCCCTGAAACAGAAATCCGCGTTGCTTTTGGCCAAGGCATCTATTCAGACCAGACTACC CAGGACACCTATAGCGAACTTTTGATACGGGCTGAGGAAGAACTCAAAAGCGGGAGTTCCGTAATCGTCGACGCTTGTTT TGTCAGTAGAGAGTCACGCATGCTTTTTGCCAACCTGGCAAAAAGCTACGCATTTAACTTTGTAATACTTTTTATTTCAT GCAGTGAGGCAATCAACAAACGCAGGCTCAGCGATCGCTCAGCGTCAGGCCGCTCGGTATCTGACGGAAGAACAGAACTG CTCAACCTCCAGCGCAGAATATTTGAGGCGCCCGACAACGGAGAGGGCCTGCTGATCCCCGTACGTACCATTATACCGGT AGCAACGCTGTGCAGCACGATCTACGAGAGGCTCGCCTGA
Upstream 100 bases:
>100_bases TAACATGAAACCATAGCCTCGTCAAATGAATATCATGATGTTCAAGAGCTTGCGGTTGAGGTGGTTTGATGCTACTCTTC AGCTAAAATGAGGCGCGCCT
Downstream 100 bases:
>100_bases CATGCTAAAGCGACTTCGCACCGGATTGCTGCACCGTCTTCAGCTACGAGAATCCTGGGTGATTCTATTTGTGCTGGGCG TGATACTGCTTAACTTCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 519; Mature: 519
Protein sequence:
>519_residues MMRSVLKSLLKPDAYPETTTKVELLQTHVSWIFLTDSHAYKIKKPVDLGFLNFSTIDRRRFYCNEEIRYNRRLCPDIYIG VVELRQTNGCASFRDQGQIIDYAVKMKRLPAESMLDRLVMNNTVSIAEIRDVARVIAEFHHTLPTSPAISEYGRPDRIRF NWIENFEQILPFESSTLPAPERQQIRSWVLSFMEQNADLFAARIDNGFIRECDGDIHLENICLTGGRVYIFDCIEFSERF RCCDTTADLAFLLMDLDFRDRNDLSAEVLATYSDVSGDNLVPALLNFYKIYRAFVRGKVESLHSIDADMNEQQRNNAITR AIRYFRLARGYIERSRLRPTLFITCGLMGCGKSTLAAQLSFELGIPSYNSDTIRKQMAGISPETEIRVAFGQGIYSDQTT QDTYSELLIRAEEELKSGSSVIVDACFVSRESRMLFANLAKSYAFNFVILFISCSEAINKRRLSDRSASGRSVSDGRTEL LNLQRRIFEAPDNGEGLLIPVRTIIPVATLCSTIYERLA
Sequences:
>Translated_519_residues MMRSVLKSLLKPDAYPETTTKVELLQTHVSWIFLTDSHAYKIKKPVDLGFLNFSTIDRRRFYCNEEIRYNRRLCPDIYIG VVELRQTNGCASFRDQGQIIDYAVKMKRLPAESMLDRLVMNNTVSIAEIRDVARVIAEFHHTLPTSPAISEYGRPDRIRF NWIENFEQILPFESSTLPAPERQQIRSWVLSFMEQNADLFAARIDNGFIRECDGDIHLENICLTGGRVYIFDCIEFSERF RCCDTTADLAFLLMDLDFRDRNDLSAEVLATYSDVSGDNLVPALLNFYKIYRAFVRGKVESLHSIDADMNEQQRNNAITR AIRYFRLARGYIERSRLRPTLFITCGLMGCGKSTLAAQLSFELGIPSYNSDTIRKQMAGISPETEIRVAFGQGIYSDQTT QDTYSELLIRAEEELKSGSSVIVDACFVSRESRMLFANLAKSYAFNFVILFISCSEAINKRRLSDRSASGRSVSDGRTEL LNLQRRIFEAPDNGEGLLIPVRTIIPVATLCSTIYERLA >Mature_519_residues MMRSVLKSLLKPDAYPETTTKVELLQTHVSWIFLTDSHAYKIKKPVDLGFLNFSTIDRRRFYCNEEIRYNRRLCPDIYIG VVELRQTNGCASFRDQGQIIDYAVKMKRLPAESMLDRLVMNNTVSIAEIRDVARVIAEFHHTLPTSPAISEYGRPDRIRF NWIENFEQILPFESSTLPAPERQQIRSWVLSFMEQNADLFAARIDNGFIRECDGDIHLENICLTGGRVYIFDCIEFSERF RCCDTTADLAFLLMDLDFRDRNDLSAEVLATYSDVSGDNLVPALLNFYKIYRAFVRGKVESLHSIDADMNEQQRNNAITR AIRYFRLARGYIERSRLRPTLFITCGLMGCGKSTLAAQLSFELGIPSYNSDTIRKQMAGISPETEIRVAFGQGIYSDQTT QDTYSELLIRAEEELKSGSSVIVDACFVSRESRMLFANLAKSYAFNFVILFISCSEAINKRRLSDRSASGRSVSDGRTEL LNLQRRIFEAPDNGEGLLIPVRTIIPVATLCSTIYERLA
Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]
COG id: COG2187
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted, cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR010488 [H]
Pfam domain/function: PF06414 Zeta_toxin [H]
EC number: NA
Molecular weight: Translated: 59292; Mature: 59292
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRSVLKSLLKPDAYPETTTKVELLQTHVSWIFLTDSHAYKIKKPVDLGFLNFSTIDRRR CHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEEEEECCCCEEECCCCCCCEEECCHHHHHH FYCNEEIRYNRRLCPDIYIGVVELRQTNGCASFRDQGQIIDYAVKMKRLPAESMLDRLVM HHCCCHHHCCCCCCCHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH NNTVSIAEIRDVARVIAEFHHTLPTSPAISEYGRPDRIRFNWIENFEQILPFESSTLPAP CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEHHHHHHHHHCCCCCCCCCCC ERQQIRSWVLSFMEQNADLFAARIDNGFIRECDGDIHLENICLTGGRVYIFDCIEFSERF HHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCEEEEEEEEECCEEEEEEHHHHHHHH RCCDTTADLAFLLMDLDFRDRNDLSAEVLATYSDVSGDNLVPALLNFYKIYRAFVRGKVE HHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH SLHSIDADMNEQQRNNAITRAIRYFRLARGYIERSRLRPTLFITCGLMGCGKSTLAAQLS HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHEEE FELGIPSYNSDTIRKQMAGISPETEIRVAFGQGIYSDQTTQDTYSELLIRAEEELKSGSS EEECCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCC VIVDACFVSRESRMLFANLAKSYAFNFVILFISCSEAINKRRLSDRSASGRSVSDGRTEL EEEEHHHHCCCCHHHHHHHHHHHHHEEHEEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHH LNLQRRIFEAPDNGEGLLIPVRTIIPVATLCSTIYERLA HHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMRSVLKSLLKPDAYPETTTKVELLQTHVSWIFLTDSHAYKIKKPVDLGFLNFSTIDRRR CHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEEEEECCCCEEECCCCCCCEEECCHHHHHH FYCNEEIRYNRRLCPDIYIGVVELRQTNGCASFRDQGQIIDYAVKMKRLPAESMLDRLVM HHCCCHHHCCCCCCCHHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH NNTVSIAEIRDVARVIAEFHHTLPTSPAISEYGRPDRIRFNWIENFEQILPFESSTLPAP CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEHHHHHHHHHCCCCCCCCCCC ERQQIRSWVLSFMEQNADLFAARIDNGFIRECDGDIHLENICLTGGRVYIFDCIEFSERF HHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCEEEEEEEEECCEEEEEEHHHHHHHH RCCDTTADLAFLLMDLDFRDRNDLSAEVLATYSDVSGDNLVPALLNFYKIYRAFVRGKVE HHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH SLHSIDADMNEQQRNNAITRAIRYFRLARGYIERSRLRPTLFITCGLMGCGKSTLAAQLS HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHEEE FELGIPSYNSDTIRKQMAGISPETEIRVAFGQGIYSDQTTQDTYSELLIRAEEELKSGSS EEECCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCC VIVDACFVSRESRMLFANLAKSYAFNFVILFISCSEAINKRRLSDRSASGRSVSDGRTEL EEEEHHHHCCCCHHHHHHHHHHHHHEEHEEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHH LNLQRRIFEAPDNGEGLLIPVRTIIPVATLCSTIYERLA HHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]