Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
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Accession | NC_008609 |
Length | 4,008,000 |
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The map label for this gene is 118578890
Identifier: 118578890
GI number: 118578890
Start: 473326
End: 473820
Strand: Direct
Name: 118578890
Synonym: Ppro_0450
Alternate gene names: NA
Gene position: 473326-473820 (Clockwise)
Preceding gene: 118578883
Following gene: 118578891
Centisome position: 11.81
GC content: 62.02
Gene sequence:
>495_bases GTGCCCTTTTGTTCGACTGCGGCCAGATCGCCCACTTGGCAAAACTGGGTAGTCAAGCCGATCCGGGCCGTCTTCATCAC CCACGCCCACATGGACCACATCATGGGGGTCCCCACGCTGGTGCGCCATCACCATGCCTCGCCCCATCCCCTTGACCTGT ACGGCCCTGCCGGCATCGCGGAACGTGTCGGCCACCTGTTGGCCGGTTTTGAGTGGAACCTGGCCGAGCCGACCTGGTTC ACCCTGCGGGTCCACGAGGTACTTCCCGACCGTATCCTGCATTTCAGCTTCCCTGGTCCGGAAAGGTTTAGGCGCCATTT TGCTGGAGAAGAAGAGCGCCAGAGTCGGGAGATCTGGTCATGCCCCTACCTGACGGTGGCGGCGGAGATCCTGGATCACA AACTGCCGGTACTGGTTTTCAGGGTCGACGAACGACCGCACTTCTCCATCGACGCTGCCAAACTGGAACAGCGGGGACTG GTTGCCGGGGCGTGA
Upstream 100 bases:
>100_bases CGGGGAAAACGGAGGCTTCCCTTCCGCTACTGCGAGCCGGCCTTCTTTGGCGGCCTGCTGGACGACCCGCTGCTGTTTCT GCGCATCCGCCCCCTGGGGA
Downstream 100 bases:
>100_bases AATCATGGTTGTGTTTTTGGGCGCCGGGTGTACACTTGCTTGCAGCAACAACTTGAAACCATACGGAAATCCATGAAAGC ACACAGATCAAGCACACCGG
Product: ribonuclease Z
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MPFCSTAARSPTWQNWVVKPIRAVFITHAHMDHIMGVPTLVRHHHASPHPLDLYGPAGIAERVGHLLAGFEWNLAEPTWF TLRVHEVLPDRILHFSFPGPERFRRHFAGEEERQSREIWSCPYLTVAAEILDHKLPVLVFRVDERPHFSIDAAKLEQRGL VAGA
Sequences:
>Translated_164_residues MPFCSTAARSPTWQNWVVKPIRAVFITHAHMDHIMGVPTLVRHHHASPHPLDLYGPAGIAERVGHLLAGFEWNLAEPTWF TLRVHEVLPDRILHFSFPGPERFRRHFAGEEERQSREIWSCPYLTVAAEILDHKLPVLVFRVDERPHFSIDAAKLEQRGL VAGA >Mature_163_residues PFCSTAARSPTWQNWVVKPIRAVFITHAHMDHIMGVPTLVRHHHASPHPLDLYGPAGIAERVGHLLAGFEWNLAEPTWFT LRVHEVLPDRILHFSFPGPERFRRHFAGEEERQSREIWSCPYLTVAAEILDHKLPVLVFRVDERPHFSIDAAKLEQRGLV AGA
Specific function: Unknown
COG id: COG1234
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily III
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18773; Mature: 18642
Theoretical pI: Translated: 7.48; Mature: 7.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFCSTAARSPTWQNWVVKPIRAVFITHAHMDHIMGVPTLVRHHHASPHPLDLYGPAGIA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCEECCCCCCHH ERVGHLLAGFEWNLAEPTWFTLRVHEVLPDRILHFSFPGPERFRRHFAGEEERQSREIWS HHHHHHHHCCCCCCCCCEEEEEEHHHHCCHHEEEECCCCHHHHHHHCCCCHHHHHHHHCC CPYLTVAAEILDHKLPVLVFRVDERPHFSIDAAKLEQRGLVAGA CCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure PFCSTAARSPTWQNWVVKPIRAVFITHAHMDHIMGVPTLVRHHHASPHPLDLYGPAGIA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCEECCCCCCHH ERVGHLLAGFEWNLAEPTWFTLRVHEVLPDRILHFSFPGPERFRRHFAGEEERQSREIWS HHHHHHHHCCCCCCCCCEEEEEEHHHHCCHHEEEECCCCHHHHHHHCCCCHHHHHHHHCC CPYLTVAAEILDHKLPVLVFRVDERPHFSIDAAKLEQRGLVAGA CCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA