Click here to switch to the map view.

The map label for this gene is 118578865

Identifier: 118578865

GI number: 118578865

Start: 443534

End: 445138

Strand: Direct

Name: 118578865

Synonym: Ppro_0423

Alternate gene names: NA

Gene position: 443534-445138 (Clockwise)

Preceding gene: 118578861

Following gene: 118578867

Centisome position: 11.07

GC content: 64.36

Gene sequence:

>1605_bases
ATGGATTTCTACCGTCCTTCCTCTTCTCAGGAAACCAGTGATGCCTTAGCCAGCATCTACAGGACGTTACGGGCGTGGAA
GTTCTACCCCACGGGACACCCCGGCCGTACGAACAGCATCAGGCAGGCCCACGCGGCCATGCAGGCCCTGCTTGCCGGTC
ATTCCCTGACACTCGTCTCCGGCCGTACCGGTTTTTCCCTTCCCGATGGTGGGGCGCTCAAGGATGCGACGCGCCTGTCG
CTGGCCCTTTCCTTCGAACTCTTCAGCAGGCGTGTGCAGAGGATAACCTTTCTCGCCGATCTCTTTCCCGAGGATCTCCT
GGATCTGGTCAGGACCCTTGCCCTGTCTCCGGAAGAGGTTCATGCGGCCGGCGGTATGGAAAAAATCATGGCCGAACGGG
GCGTACGGACCATCTGGGTCAACGAACTGGATCTCTCCGCCATCCAGGGGAAGCGGCGCGGCGTGGAGGCGAGCGGCATC
GTGCCACCGGGGGTTGATGAGCTTGAACGGCCGGTTGTCTCCGTCGTCGCGGAGAGTGAAGCGTTGCCTGTCTCCGCTGA
GGATCGGCCCGACTCGGAAGAGACGCTGCGATCCCTGCTGCTTCGCCTGGCCAGGGCACGGGATGGGCATGAGTATCTGA
TGCTGGTGCGCCAGGCTACCGCCTGTGCCGATCTCATGGTGTCGCGGAACAGCCTGGCCCCGTTGCTGCCTCTGGTGGAA
CTGTTGGCGCTGCACGCCCATGGCCCGGACCGGGAGATGGGTGAACATGCCCGCTCCGGGCTGGAACAGCTGGCCGGCCA
GCGGGCGCTGCTGCTTTTTCTGCTCGATCCGCCGGCCGACACGGAGGGCGCGGCTCCGGAGACCCTGGCGACGCTGTTCA
GCTCCGCGGACACTGCCGCCATTTCCCTCGTGGTGGAGCTGCTGGCGGCCAGCGAAAGCCGCGCCCGGCGCAAGGCGCTG
GCCACCCTGCTGGTTCAGGCGGGGGAGCGGGCCGTGCCGGCGATTACGGCTATGATGTCGGACCAGCGCTGGTACGTGAT
CCGCAATCTGGTTGCCATTCTGGGAGATATCGCCAGCCCCGGGGTGTTACCGGTCCTGCGTGAGTGCCTTCGGCATGAAG
ATAACCGGGTCTGCAAGGAGGCTATCCGCAGCCTGGCAAAAATCGGTGGCAGGGATGCCGAGACGGCCATCATTGCCGTT
CTCAAGGGAAATGATCCGTTGCTGCTCCCCCAGGCCATGGCGTCCCTGGGCGGGATGCGCAGCCGCCGGTCGGTGGGGGC
GCTGATGCAGCTCATCTGCGCGGACGACCTGTTCCTGAAGAGTTTGCCTCTCAAGATCAATGCCCTGGCTGCAGTCGCCA
TGATCGGCGATAGCTCCGTTGTGCCGCGCCTGCTGGAGATGCTGCAGCGTCGTCCGCTGATGGCACGTAACCGCTGGACC
GCCCTGAAGATCCATGTGGTCACCTGTTTGGCTGGGCTGGGCGAGCCGCGCGCCATCCCGGTTCTCAGGAAGATGGCGCA
TGCATCGGGAGAGCTTGGGCATGCCTGCACTGTTGTTATCGACTCCATGGAGCGGACGGGAGGCGGCAGACGTGCAGGCG
CTTGA

Upstream 100 bases:

>100_bases
AGGCGGGTTTGCGTCGGTTACGCCGCTCACGGGAATTGACAAAGCCGGTTTTCGGTATATCATTGCAGCCACCTTATTGC
CAGCAAACAAGGAATGAACA

Downstream 100 bases:

>100_bases
CAAGCAGGCCGCCCTGCGGATGGTCACCGTTTTTTCCGGCGCGGTCAAGGGAATGGCCTTCTATCCCGCGTCGCACCCCG
CCATCAGCCAGCCACTGCTG

Product: HEAT repeat-containing PBS lyase

Products: NA

Alternate protein names: HEAT-Like Repeat-Containing Protein; HEAT Repeat-Containing Protein; PBS Lyase HEAT Domain Protein Repeat-Containing Protein; PBS Lyase Heat-Like Repeat Protein

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MDFYRPSSSQETSDALASIYRTLRAWKFYPTGHPGRTNSIRQAHAAMQALLAGHSLTLVSGRTGFSLPDGGALKDATRLS
LALSFELFSRRVQRITFLADLFPEDLLDLVRTLALSPEEVHAAGGMEKIMAERGVRTIWVNELDLSAIQGKRRGVEASGI
VPPGVDELERPVVSVVAESEALPVSAEDRPDSEETLRSLLLRLARARDGHEYLMLVRQATACADLMVSRNSLAPLLPLVE
LLALHAHGPDREMGEHARSGLEQLAGQRALLLFLLDPPADTEGAAPETLATLFSSADTAAISLVVELLAASESRARRKAL
ATLLVQAGERAVPAITAMMSDQRWYVIRNLVAILGDIASPGVLPVLRECLRHEDNRVCKEAIRSLAKIGGRDAETAIIAV
LKGNDPLLLPQAMASLGGMRSRRSVGALMQLICADDLFLKSLPLKINALAAVAMIGDSSVVPRLLEMLQRRPLMARNRWT
ALKIHVVTCLAGLGEPRAIPVLRKMAHASGELGHACTVVIDSMERTGGGRRAGA

Sequences:

>Translated_534_residues
MDFYRPSSSQETSDALASIYRTLRAWKFYPTGHPGRTNSIRQAHAAMQALLAGHSLTLVSGRTGFSLPDGGALKDATRLS
LALSFELFSRRVQRITFLADLFPEDLLDLVRTLALSPEEVHAAGGMEKIMAERGVRTIWVNELDLSAIQGKRRGVEASGI
VPPGVDELERPVVSVVAESEALPVSAEDRPDSEETLRSLLLRLARARDGHEYLMLVRQATACADLMVSRNSLAPLLPLVE
LLALHAHGPDREMGEHARSGLEQLAGQRALLLFLLDPPADTEGAAPETLATLFSSADTAAISLVVELLAASESRARRKAL
ATLLVQAGERAVPAITAMMSDQRWYVIRNLVAILGDIASPGVLPVLRECLRHEDNRVCKEAIRSLAKIGGRDAETAIIAV
LKGNDPLLLPQAMASLGGMRSRRSVGALMQLICADDLFLKSLPLKINALAAVAMIGDSSVVPRLLEMLQRRPLMARNRWT
ALKIHVVTCLAGLGEPRAIPVLRKMAHASGELGHACTVVIDSMERTGGGRRAGA
>Mature_534_residues
MDFYRPSSSQETSDALASIYRTLRAWKFYPTGHPGRTNSIRQAHAAMQALLAGHSLTLVSGRTGFSLPDGGALKDATRLS
LALSFELFSRRVQRITFLADLFPEDLLDLVRTLALSPEEVHAAGGMEKIMAERGVRTIWVNELDLSAIQGKRRGVEASGI
VPPGVDELERPVVSVVAESEALPVSAEDRPDSEETLRSLLLRLARARDGHEYLMLVRQATACADLMVSRNSLAPLLPLVE
LLALHAHGPDREMGEHARSGLEQLAGQRALLLFLLDPPADTEGAAPETLATLFSSADTAAISLVVELLAASESRARRKAL
ATLLVQAGERAVPAITAMMSDQRWYVIRNLVAILGDIASPGVLPVLRECLRHEDNRVCKEAIRSLAKIGGRDAETAIIAV
LKGNDPLLLPQAMASLGGMRSRRSVGALMQLICADDLFLKSLPLKINALAAVAMIGDSSVVPRLLEMLQRRPLMARNRWT
ALKIHVVTCLAGLGEPRAIPVLRKMAHASGELGHACTVVIDSMERTGGGRRAGA

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57595; Mature: 57595

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFYRPSSSQETSDALASIYRTLRAWKFYPTGHPGRTNSIRQAHAAMQALLAGHSLTLVS
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
GRTGFSLPDGGALKDATRLSLALSFELFSRRVQRITFLADLFPEDLLDLVRTLALSPEEV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHH
HAAGGMEKIMAERGVRTIWVNELDLSAIQGKRRGVEASGIVPPGVDELERPVVSVVAESE
HHCCCHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC
ALPVSAEDRPDSEETLRSLLLRLARARDGHEYLMLVRQATACADLMVSRNSLAPLLPLVE
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LLALHAHGPDREMGEHARSGLEQLAGQRALLLFLLDPPADTEGAAPETLATLFSSADTAA
HHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCHHHH
ISLVVELLAASESRARRKALATLLVQAGERAVPAITAMMSDQRWYVIRNLVAILGDIASP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
GVLPVLRECLRHEDNRVCKEAIRSLAKIGGRDAETAIIAVLKGNDPLLLPQAMASLGGMR
CHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEECHHHHHHHCCHH
SRRSVGALMQLICADDLFLKSLPLKINALAAVAMIGDSSVVPRLLEMLQRRPLMARNRWT
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCH
ALKIHVVTCLAGLGEPRAIPVLRKMAHASGELGHACTVVIDSMERTGGGRRAGA
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHEEHHHHHCCCCCCCCC
>Mature Secondary Structure
MDFYRPSSSQETSDALASIYRTLRAWKFYPTGHPGRTNSIRQAHAAMQALLAGHSLTLVS
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
GRTGFSLPDGGALKDATRLSLALSFELFSRRVQRITFLADLFPEDLLDLVRTLALSPEEV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHH
HAAGGMEKIMAERGVRTIWVNELDLSAIQGKRRGVEASGIVPPGVDELERPVVSVVAESE
HHCCCHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC
ALPVSAEDRPDSEETLRSLLLRLARARDGHEYLMLVRQATACADLMVSRNSLAPLLPLVE
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LLALHAHGPDREMGEHARSGLEQLAGQRALLLFLLDPPADTEGAAPETLATLFSSADTAA
HHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCHHHH
ISLVVELLAASESRARRKALATLLVQAGERAVPAITAMMSDQRWYVIRNLVAILGDIASP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
GVLPVLRECLRHEDNRVCKEAIRSLAKIGGRDAETAIIAVLKGNDPLLLPQAMASLGGMR
CHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEECHHHHHHHCCHH
SRRSVGALMQLICADDLFLKSLPLKINALAAVAMIGDSSVVPRLLEMLQRRPLMARNRWT
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCH
ALKIHVVTCLAGLGEPRAIPVLRKMAHASGELGHACTVVIDSMERTGGGRRAGA
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHEEHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA