Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
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Accession | NC_008609 |
Length | 4,008,000 |
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The map label for this gene is yacH [H]
Identifier: 118578859
GI number: 118578859
Start: 435612
End: 436862
Strand: Direct
Name: yacH [H]
Synonym: Ppro_0417
Alternate gene names: 118578859
Gene position: 435612-436862 (Clockwise)
Preceding gene: 118578858
Following gene: 118578860
Centisome position: 10.87
GC content: 63.39
Gene sequence:
>1251_bases ATGAGACGAACATCCCTTTGGATCAGAGCACTGCATTTCCTGCTCGCCATGCTGCTGGCCATACCCCTTCAGCCAATGGC CCAACAAGGGGGGGGAGGGGCGACCAATAAGCTGTCCCAGCAAGAGCTGGCGCAACTGCTGGCCCCCATCGCCCTCTATC CCGATGAACTGGTTTCACAGGTCCTCATGGCGTCAACCTACCCGCTGGAGGTGGTCCAGGCCGACCGTTGGGTGCAGGGG AACAAGGGGCTCCAGGGTGACGCACTGGCCAAGGCCCTGGAAAAGGAGAGCTGGGATCCCAGCGTCAAGTCGCTGGTCAA CTTCCCCTCCGTGCTTTCTGCCATGAGCCAGAAGCTGGACCTGACCACCAAGCTGGGAGATGCCTTCCTCTCCCAGCAGA AAGAGGTCATGGACACCATCCAGTTCCTGCGCAAGAAGGCCTACGACGCGGGCAACCTGAAGACGACCAAGGAACAGAAG GTTGTCGTGGAGAAGGAAACCATCGTCATCCAGCCGGCACAAACACAGGTCGTCTACGTCCCCTCCTACAGCACGACCGT GGTCTACGGCGCCTGGATGTATCCCGCCTACCCTCCCTACTACTATTATCCTCCCCCTCCGCCGGCCTATCCGGCCTACC ATTTCGCCGCCGGTGTGGCAGTGGGGGCCGCCTGGGGCTACGCCTGGGGGAGCTGCAACTGGCATGGCGGTGATGTGGAT ATCGACTACAACCGAAATACCACCATCAACAACAACATCGACCGGAGCAAGTACCAGAACAGGGTCAATCCCAACGGAAG GGGGACCTGGCAACATGATCCCAGCCACCGTAAAAACGTTGCCTACCGGGACAACGCCACGGCGAAACAGTTCGGTCAGT CCCCCTCACGCTCCGCCGAGTCAAGGCGTGAGGCACGGGGATTCGGCGACGCTGGGGGGAGAGGCGGTGCGGCCCGCCCC TCGGCCGGCACCATGGACCGCGGGGCCGGACAACGGGGCGGATCGGCTGGTGCAAGTGTCTCCGACCGCAGCAGCGGGCA ACGAACTTCCACGGGAAGTGGCCGTGACAGCGCCTTTGGTGGCGGCAGCGGAAGCCAGGAGCGCATGGCCAGCGACAGGG GAACGTCAAGCCGCCAGAGTGCCGGATTGAGCAGCGGTTCCCGCGGTGACAGCGGGTTTTCCCGGTCCAGTGGCGGATTC GGCGGTGGAGGTCGAAGCTTCGGCGGCGGCGGACGTGGCGGCCGCAGGTAG
Upstream 100 bases:
>100_bases CCTGCCCGGTATCAGCTGGTACGGTCGCAGGGTGGCTAAGCTGGATGGCCAGGCATTCGAGAAACAGCAATAACCCGAAC CTGCGCGTAAAGGAGGCCGT
Downstream 100 bases:
>100_bases GGCTACGTTCCTTAGTACCCATACAGACAGGGAGGATAGCGCATCATGTTAATTTCATCCGGAAAGATCCATGCAGCCCT GCTCCTGCTGCTCTCCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MRRTSLWIRALHFLLAMLLAIPLQPMAQQGGGGATNKLSQQELAQLLAPIALYPDELVSQVLMASTYPLEVVQADRWVQG NKGLQGDALAKALEKESWDPSVKSLVNFPSVLSAMSQKLDLTTKLGDAFLSQQKEVMDTIQFLRKKAYDAGNLKTTKEQK VVVEKETIVIQPAQTQVVYVPSYSTTVVYGAWMYPAYPPYYYYPPPPPAYPAYHFAAGVAVGAAWGYAWGSCNWHGGDVD IDYNRNTTINNNIDRSKYQNRVNPNGRGTWQHDPSHRKNVAYRDNATAKQFGQSPSRSAESRREARGFGDAGGRGGAARP SAGTMDRGAGQRGGSAGASVSDRSSGQRTSTGSGRDSAFGGGSGSQERMASDRGTSSRQSAGLSSGSRGDSGFSRSSGGF GGGGRSFGGGGRGGRR
Sequences:
>Translated_416_residues MRRTSLWIRALHFLLAMLLAIPLQPMAQQGGGGATNKLSQQELAQLLAPIALYPDELVSQVLMASTYPLEVVQADRWVQG NKGLQGDALAKALEKESWDPSVKSLVNFPSVLSAMSQKLDLTTKLGDAFLSQQKEVMDTIQFLRKKAYDAGNLKTTKEQK VVVEKETIVIQPAQTQVVYVPSYSTTVVYGAWMYPAYPPYYYYPPPPPAYPAYHFAAGVAVGAAWGYAWGSCNWHGGDVD IDYNRNTTINNNIDRSKYQNRVNPNGRGTWQHDPSHRKNVAYRDNATAKQFGQSPSRSAESRREARGFGDAGGRGGAARP SAGTMDRGAGQRGGSAGASVSDRSSGQRTSTGSGRDSAFGGGSGSQERMASDRGTSSRQSAGLSSGSRGDSGFSRSSGGF GGGGRSFGGGGRGGRR >Mature_416_residues MRRTSLWIRALHFLLAMLLAIPLQPMAQQGGGGATNKLSQQELAQLLAPIALYPDELVSQVLMASTYPLEVVQADRWVQG NKGLQGDALAKALEKESWDPSVKSLVNFPSVLSAMSQKLDLTTKLGDAFLSQQKEVMDTIQFLRKKAYDAGNLKTTKEQK VVVEKETIVIQPAQTQVVYVPSYSTTVVYGAWMYPAYPPYYYYPPPPPAYPAYHFAAGVAVGAAWGYAWGSCNWHGGDVD IDYNRNTTINNNIDRSKYQNRVNPNGRGTWQHDPSHRKNVAYRDNATAKQFGQSPSRSAESRREARGFGDAGGRGGAARP SAGTMDRGAGQRGGSAGASVSDRSSGQRTSTGSGRDSAFGGGSGSQERMASDRGTSSRQSAGLSSGSRGDSGFSRSSGGF GGGGRSFGGGGRGGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786308, Length=321, Percent_Identity=35.202492211838, Blast_Score=171, Evalue=1e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021728 [H]
Pfam domain/function: PF11737 DUF3300 [H]
EC number: NA
Molecular weight: Translated: 44499; Mature: 44499
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTSLWIRALHFLLAMLLAIPLQPMAQQGGGGATNKLSQQELAQLLAPIALYPDELVSQ CCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH VLMASTYPLEVVQADRWVQGNKGLQGDALAKALEKESWDPSVKSLVNFPSVLSAMSQKLD HHHHCCCCHHHHHCCCEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LTTKLGDAFLSQQKEVMDTIQFLRKKAYDAGNLKTTKEQKVVVEKETIVIQPAQTQVVYV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEEEEECCCEEEEEE PSYSTTVVYGAWMYPAYPPYYYYPPPPPAYPAYHFAAGVAVGAAWGYAWGSCNWHGGDVD CCCCCEEEEEEEECCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEE IDYNRNTTINNNIDRSKYQNRVNPNGRGTWQHDPSHRKNVAYRDNATAKQFGQSPSRSAE EECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHCCCCCHHHH SRREARGFGDAGGRGGAARPSAGTMDRGAGQRGGSAGASVSDRSSGQRTSTGSGRDSAFG HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGSGSQERMASDRGTSSRQSAGLSSGSRGDSGFSRSSGGFGGGGRSFGGGGRGGRR CCCCCHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRTSLWIRALHFLLAMLLAIPLQPMAQQGGGGATNKLSQQELAQLLAPIALYPDELVSQ CCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHH VLMASTYPLEVVQADRWVQGNKGLQGDALAKALEKESWDPSVKSLVNFPSVLSAMSQKLD HHHHCCCCHHHHHCCCEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LTTKLGDAFLSQQKEVMDTIQFLRKKAYDAGNLKTTKEQKVVVEKETIVIQPAQTQVVYV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEEEEECCCEEEEEE PSYSTTVVYGAWMYPAYPPYYYYPPPPPAYPAYHFAAGVAVGAAWGYAWGSCNWHGGDVD CCCCCEEEEEEEECCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEE IDYNRNTTINNNIDRSKYQNRVNPNGRGTWQHDPSHRKNVAYRDNATAKQFGQSPSRSAE EECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHCCCCCHHHH SRREARGFGDAGGRGGAARPSAGTMDRGAGQRGGSAGASVSDRSSGQRTSTGSGRDSAFG HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGSGSQERMASDRGTSSRQSAGLSSGSRGDSGFSRSSGGFGGGGRSFGGGGRGGRR CCCCCHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503 [H]