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The map label for this gene is 118578849

Identifier: 118578849

GI number: 118578849

Start: 420640

End: 422118

Strand: Direct

Name: 118578849

Synonym: Ppro_0407

Alternate gene names: NA

Gene position: 420640-422118 (Clockwise)

Preceding gene: 118578848

Following gene: 118578850

Centisome position: 10.5

GC content: 66.33

Gene sequence:

>1479_bases
ATGAGCGCGTGGCCGCAACATCCGCTTATCTACGAGATCAACACCTGGGTCTGGCTCCGGGAGCTTGGTCAACAACTGGG
CGAGCCGCTGACCCTGGCCAGCGTCCCCAAGAGCGTGTGGGACGACATCGCCTCCTTAGGCTTCGATGGGGTCTGGCTGA
TGGGGGTCTGGGAGCGCAGTCCCGCCGGCATCCAGGTGTCCATGGCCAACCAGGGACTGCTGGATGACTTTTCCCGGGCC
CTGCCCGACTTCAGGGCGGAAGACAACGTCGGTTCCCCCTACTGCGTGCGCAACTACGAGGTGGACCCTTGTCTGGGGGG
GAGGGAGGGGCTGGCGGTTGCCCGTCAGGAACTGGCCAGCCGGGGCCTTGCCCTGATCCTGGACTTGGTCCCCAACCACG
TGGCTCCCGACCACCCCTGGGTGACGGAGCATCCCGACTACTTCATCCGGGGGGATTACGGCGATGTTATGCGGGAACCG
GCGTCGTTTCTGACTACAGGAGGGCATGTGTACGCCTGCGGCCGGGATCCTTTCTTCCCGGCCTGGCCCGACGTCCTGCA
GCTGAACGCCTTCGATCCCGGCCTGCGGGCCGCGGTGAGGGAGACGGTTGGCTCCATCGCCGACCAGTGCGACGGCGTGC
GCTGCGACATGGCCATGCTGGTCATGAACCACATATTCCAGCGCACCTGGGGGGAGCGGGCCGGGGTACCCCCTGCCGTT
GACTACTGGCCGGAGCTGATCGGTGCGGTGCGCGCAACCCACCCCGGCTTCCTCTTCATGGCCGAGGCGTACTGGGAGCT
GGAGTGGGAACTGCAGCAGCAGGGGTTTGACTTCTGCTACGACAAGAAGTTGTACGACCGGCTGGAGCACGGCCCGGCCG
AGAACGTCCGACTGCACCTCTGCGCCGAGGCGACCTATCAGGAGCGGCTGGTGCGTTTCATCGAAAACCACGACGAGCCG
CGGGCCGCCGCCACCTTCTCGCCGGAGAAGGAGAGGGCCGTTGCCCTGCTCACCACCACCCTTCCGGGGGCGGCGCTGCT
CCACGAGGGGCAACTGGAGGGGCGCAGGGTAAGGCTTCCCGTGTTCCTCGGCCGCCGTCCTGCCGAGGAGGTTGACCATA
AGTTACGGGCATTCTACCAGGCCCTGCTGGTGGTAATCGCCCGTGAAGGGGTGCGCGGCGGTCGTTGGCGCCTCTGTGAA
CGGAGCGGCTGGCCGGACAACGCCAGCCACCTGAATATCGTTGCCCACTGCTGGAGCGGGGAGAAGAGCCGCCACCTGAT
CGTCGTAAACTTGAGCGCTACCGCCGCCCAGGCCCGCGTCCAGCTGCCGTGTGAGGAACTGCGGGGGAGAACCTGGCGTC
TGGTGGATCTGCTGACCGCTGAGAGCTGGGACCGGGACGGGGACGAGATGACGGGGGCGGGGCTGTATGTCGACCTGGGG
CCGTGGAAATGCAACATCTTCCGGCTGGAGCCGCTGTGA

Upstream 100 bases:

>100_bases
GCGGAGATGGCGGCGATCAAAAAGACGGTGGGCAAGTAACGGGCGGCGGAAGGGTGCCCGGCTGCCTGTTTTCTACCAGC
CGGGAGATAAGGAGCATGCC

Downstream 100 bases:

>100_bases
GAGGTCCCATGGGACAGGCCTGATCCGGAGGGTGATGGTGGAGGAGAAACGACAGATGGTACTGAATATTCGGATCCTCG
CTGCGGCGGCACTGATGGTA

Product: alpha amylase catalytic subunit

Products: NA

Alternate protein names: Alpha Amylase; Alpha-Amylase Family Protein; Alpha-Amylase; Alpha Amylase Domain-Containing Protein; Alpha Amylase Catalytic Subunit; Alpha Amylase Catalytic Domain-Containing Protein; Alpha Amylase Family Protein; Alpha Amylase Domain Protein; Glycoside Hydrolase

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MSAWPQHPLIYEINTWVWLRELGQQLGEPLTLASVPKSVWDDIASLGFDGVWLMGVWERSPAGIQVSMANQGLLDDFSRA
LPDFRAEDNVGSPYCVRNYEVDPCLGGREGLAVARQELASRGLALILDLVPNHVAPDHPWVTEHPDYFIRGDYGDVMREP
ASFLTTGGHVYACGRDPFFPAWPDVLQLNAFDPGLRAAVRETVGSIADQCDGVRCDMAMLVMNHIFQRTWGERAGVPPAV
DYWPELIGAVRATHPGFLFMAEAYWELEWELQQQGFDFCYDKKLYDRLEHGPAENVRLHLCAEATYQERLVRFIENHDEP
RAAATFSPEKERAVALLTTTLPGAALLHEGQLEGRRVRLPVFLGRRPAEEVDHKLRAFYQALLVVIAREGVRGGRWRLCE
RSGWPDNASHLNIVAHCWSGEKSRHLIVVNLSATAAQARVQLPCEELRGRTWRLVDLLTAESWDRDGDEMTGAGLYVDLG
PWKCNIFRLEPL

Sequences:

>Translated_492_residues
MSAWPQHPLIYEINTWVWLRELGQQLGEPLTLASVPKSVWDDIASLGFDGVWLMGVWERSPAGIQVSMANQGLLDDFSRA
LPDFRAEDNVGSPYCVRNYEVDPCLGGREGLAVARQELASRGLALILDLVPNHVAPDHPWVTEHPDYFIRGDYGDVMREP
ASFLTTGGHVYACGRDPFFPAWPDVLQLNAFDPGLRAAVRETVGSIADQCDGVRCDMAMLVMNHIFQRTWGERAGVPPAV
DYWPELIGAVRATHPGFLFMAEAYWELEWELQQQGFDFCYDKKLYDRLEHGPAENVRLHLCAEATYQERLVRFIENHDEP
RAAATFSPEKERAVALLTTTLPGAALLHEGQLEGRRVRLPVFLGRRPAEEVDHKLRAFYQALLVVIAREGVRGGRWRLCE
RSGWPDNASHLNIVAHCWSGEKSRHLIVVNLSATAAQARVQLPCEELRGRTWRLVDLLTAESWDRDGDEMTGAGLYVDLG
PWKCNIFRLEPL
>Mature_491_residues
SAWPQHPLIYEINTWVWLRELGQQLGEPLTLASVPKSVWDDIASLGFDGVWLMGVWERSPAGIQVSMANQGLLDDFSRAL
PDFRAEDNVGSPYCVRNYEVDPCLGGREGLAVARQELASRGLALILDLVPNHVAPDHPWVTEHPDYFIRGDYGDVMREPA
SFLTTGGHVYACGRDPFFPAWPDVLQLNAFDPGLRAAVRETVGSIADQCDGVRCDMAMLVMNHIFQRTWGERAGVPPAVD
YWPELIGAVRATHPGFLFMAEAYWELEWELQQQGFDFCYDKKLYDRLEHGPAENVRLHLCAEATYQERLVRFIENHDEPR
AAATFSPEKERAVALLTTTLPGAALLHEGQLEGRRVRLPVFLGRRPAEEVDHKLRAFYQALLVVIAREGVRGGRWRLCER
SGWPDNASHLNIVAHCWSGEKSRHLIVVNLSATAAQARVQLPCEELRGRTWRLVDLLTAESWDRDGDEMTGAGLYVDLGP
WKCNIFRLEPL

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55500; Mature: 55368

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAWPQHPLIYEINTWVWLRELGQQLGEPLTLASVPKSVWDDIASLGFDGVWLMGVWERS
CCCCCCCCEEEEECHHHHHHHHHHHHCCCEEHHHCCHHHHHHHHHCCCCCEEEEEEECCC
PAGIQVSMANQGLLDDFSRALPDFRAEDNVGSPYCVRNYEVDPCLGGREGLAVARQELAS
CCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH
RGLALILDLVPNHVAPDHPWVTEHPDYFIRGDYGDVMREPASFLTTGGHVYACGRDPFFP
CCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHCCHHHHCCCCEEEECCCCCCCC
AWPDVLQLNAFDPGLRAAVRETVGSIADQCDGVRCDMAMLVMNHIFQRTWGERAGVPPAV
CCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHH
DYWPELIGAVRATHPGFLFMAEAYWELEWELQQQGFDFCYDKKLYDRLEHGPAENVRLHL
HHHHHHHHHHHCCCCCEEEEEEEHEEEEEEEHHCCCCHHCCHHHHHHHHCCCCCCEEEEE
CAEATYQERLVRFIENHDEPRAAATFSPEKERAVALLTTTLPGAALLHEGQLEGRRVRLP
EECCHHHHHHHHHHHCCCCCCEECCCCCCHHCEEEEEEECCCCHHHEECCCCCCCEEEEE
VFLGRRPAEEVDHKLRAFYQALLVVIAREGVRGGRWRLCERSGWPDNASHLNIVAHCWSG
EEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEEEECCC
EKSRHLIVVNLSATAAQARVQLPCEELRGRTWRLVDLLTAESWDRDGDEMTGAGLYVDLG
CCCCEEEEEEECCHHHHHEEECCHHHHCCCEEEEEEEHHHCCCCCCCCCCCCCEEEEEEC
PWKCNIFRLEPL
CCEEEEEEECCC
>Mature Secondary Structure 
SAWPQHPLIYEINTWVWLRELGQQLGEPLTLASVPKSVWDDIASLGFDGVWLMGVWERS
CCCCCCCEEEEECHHHHHHHHHHHHCCCEEHHHCCHHHHHHHHHCCCCCEEEEEEECCC
PAGIQVSMANQGLLDDFSRALPDFRAEDNVGSPYCVRNYEVDPCLGGREGLAVARQELAS
CCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH
RGLALILDLVPNHVAPDHPWVTEHPDYFIRGDYGDVMREPASFLTTGGHVYACGRDPFFP
CCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHCCHHHHCCCCEEEECCCCCCCC
AWPDVLQLNAFDPGLRAAVRETVGSIADQCDGVRCDMAMLVMNHIFQRTWGERAGVPPAV
CCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHH
DYWPELIGAVRATHPGFLFMAEAYWELEWELQQQGFDFCYDKKLYDRLEHGPAENVRLHL
HHHHHHHHHHHCCCCCEEEEEEEHEEEEEEEHHCCCCHHCCHHHHHHHHCCCCCCEEEEE
CAEATYQERLVRFIENHDEPRAAATFSPEKERAVALLTTTLPGAALLHEGQLEGRRVRLP
EECCHHHHHHHHHHHCCCCCCEECCCCCCHHCEEEEEEECCCCHHHEECCCCCCCEEEEE
VFLGRRPAEEVDHKLRAFYQALLVVIAREGVRGGRWRLCERSGWPDNASHLNIVAHCWSG
EEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEEEECCC
EKSRHLIVVNLSATAAQARVQLPCEELRGRTWRLVDLLTAESWDRDGDEMTGAGLYVDLG
CCCCEEEEEEECCHHHHHEEECCHHHHCCCEEEEEEEHHHCCCCCCCCCCCCCEEEEEEC
PWKCNIFRLEPL
CCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA