Click here to switch to the map view.

The map label for this gene is pqiA [H]

Identifier: 118578843

GI number: 118578843

Start: 412995

End: 413660

Strand: Direct

Name: pqiA [H]

Synonym: Ppro_0401

Alternate gene names: 118578843

Gene position: 412995-413660 (Clockwise)

Preceding gene: 118578842

Following gene: 118578844

Centisome position: 10.3

GC content: 64.41

Gene sequence:

>666_bases
ATGAGCGCCAGTGAGATCAGCCTGGAGCGGTCCGGCGATGGCGATTTGCCGCTGCTGATCGCCTGTCACGAGTGTGACCT
CCTCCAGCGGGAGATCAAGCTTCTCCCCGGCAAAGTGGCTCGTTGCGTACGCTGCGGAGCCAAGCTCTACCGCTCACCCC
ATGCCAGCCTGGACTATACCCTTTCCTTTACCCTGACCGCCGCCCTGGTTTTCATCGTCGCCAATGCCTACCCCATCGTT
GGCATCAACATCCAGGGGACGCGCCACGACACCACCCTCATGGGTGCGGCCCGGGCGCTCTGGAACCAGGACATGACCAC
CATCTCCCTGCTGGTGTTCCTGACCACCCTCCTGATGCCGGCCCTGGAAATCGCCTTCATGCTCCACCTGCTGCTGGCGC
TCAAGTCCGGGCGCCGGCCGGCCGGCCTGAACATCAGCATGCGCATCCTGCGGAACCTGAGCCCCTGGGGCATGGTGGAG
GTGTTCCTGCTGGGGGTGCTGGTGGCGCTGGTGAAGCTCACCCATTTTGCCAGAGTCATCCCCGGCCTGGCCCTCTGGTC
CTTCGGCGTCCTGATCCTGCTGATGGCTGCCGCCGCCGCATCCTTCGATATTCGTGATGTCTGGGTGCGGGCGGAAGCTG
CCGCTGGGGAGAGGAACGGCCCATGA

Upstream 100 bases:

>100_bases
CTTCACATGGCCAGGACAAATTCCCCGCACGCAGTTCCATCCCCACCAGGCCAACCGACTGAGCGATTCAGCGACGGCGT
AAGGGAACAGGAGACACGCC

Downstream 100 bases:

>100_bases
CCAGAGCCCCGCTTACCGCGCAGGATTGCGGACTGTTCTCCTGCCATGTGTGCGGCCTGCTGTCAAAGGGAGTGAAAGGC
AGCGGAGAGTCCCGCTGCCC

Product: paraquat-inducible protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSASEISLERSGDGDLPLLIACHECDLLQREIKLLPGKVARCVRCGAKLYRSPHASLDYTLSFTLTAALVFIVANAYPIV
GINIQGTRHDTTLMGAARALWNQDMTTISLLVFLTTLLMPALEIAFMLHLLLALKSGRRPAGLNISMRILRNLSPWGMVE
VFLLGVLVALVKLTHFARVIPGLALWSFGVLILLMAAAAASFDIRDVWVRAEAAAGERNGP

Sequences:

>Translated_221_residues
MSASEISLERSGDGDLPLLIACHECDLLQREIKLLPGKVARCVRCGAKLYRSPHASLDYTLSFTLTAALVFIVANAYPIV
GINIQGTRHDTTLMGAARALWNQDMTTISLLVFLTTLLMPALEIAFMLHLLLALKSGRRPAGLNISMRILRNLSPWGMVE
VFLLGVLVALVKLTHFARVIPGLALWSFGVLILLMAAAAASFDIRDVWVRAEAAAGERNGP
>Mature_220_residues
SASEISLERSGDGDLPLLIACHECDLLQREIKLLPGKVARCVRCGAKLYRSPHASLDYTLSFTLTAALVFIVANAYPIVG
INIQGTRHDTTLMGAARALWNQDMTTISLLVFLTTLLMPALEIAFMLHLLLALKSGRRPAGLNISMRILRNLSPWGMVEV
FLLGVLVALVKLTHFARVIPGLALWSFGVLILLMAAAAASFDIRDVWVRAEAAAGERNGP

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1787183, Length=188, Percent_Identity=24.468085106383, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1788137, Length=189, Percent_Identity=24.3386243386243, Blast_Score=67, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 24033; Mature: 23902

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASEISLERSGDGDLPLLIACHECDLLQREIKLLPGKVARCVRCGAKLYRSPHASLDYT
CCCCCCEEECCCCCCCEEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHH
LSFTLTAALVFIVANAYPIVGINIQGTRHDTTLMGAARALWNQDMTTISLLVFLTTLLMP
HHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ALEIAFMLHLLLALKSGRRPAGLNISMRILRNLSPWGMVEVFLLGVLVALVKLTHFARVI
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PGLALWSFGVLILLMAAAAASFDIRDVWVRAEAAAGERNGP
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SASEISLERSGDGDLPLLIACHECDLLQREIKLLPGKVARCVRCGAKLYRSPHASLDYT
CCCCCEEECCCCCCCEEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHH
LSFTLTAALVFIVANAYPIVGINIQGTRHDTTLMGAARALWNQDMTTISLLVFLTTLLMP
HHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ALEIAFMLHLLLALKSGRRPAGLNISMRILRNLSPWGMVEVFLLGVLVALVKLTHFARVI
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
PGLALWSFGVLILLMAAAAASFDIRDVWVRAEAAAGERNGP
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]