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The map label for this gene is yjcF [C]

Identifier: 118578760

GI number: 118578760

Start: 315530

End: 316888

Strand: Direct

Name: yjcF [C]

Synonym: Ppro_0318

Alternate gene names: 118578760

Gene position: 315530-316888 (Clockwise)

Preceding gene: 118578759

Following gene: 118578761

Centisome position: 7.87

GC content: 65.78

Gene sequence:

>1359_bases
ATGCAAAGCGGTTTTTCCCCCGAAACGATCAAGGCGCTTGTGGATGCAGGCGGTTTTTTCTTCTCGGTGCTCTCCGGCGC
GGCCGCTGGCCTGTGGGCGCTGGTAAGGTGGCTCGACGACCGGCGCGACCAGCGACTTCAGGAGGAGCGGCTGGAATCTG
CCCGTCTGGATCAGAAGCGGTTGGCGTCCGAGCAGGCCGAGCAGGCCCGTCGCGCCGAGCTGGAGCGGCGCGAACAGGAG
GAGCAGGGGCGGCGGGCCGAGCGGGCCGCCAACCTGATCTGCGAATTCAGCAAGTCCAAGACGCCGGAAGAGCGTGCCTG
GACGGCCCTGGCCCTCGGCCTGTATCCGGAGGAGACCCTGCGGCTTCTGGTCTGCTCTCTGGGGCAGTTCAGCGAGGAGA
GCGTTCAGGGGGTGCAGCTGGCTCTGGTCTCGTTCGGCAGCCGTGCTGTTGACGAGGTGGTCCGTCTCAACCGGGTTGCC
CGCTCCTTCGAGGCGGACCGCGACGACGAGCCAGCTGACGGCGTCCCGCTGTACGATACGGCCAGGCTGCTGGAGAGGAC
CAAGGTCGTGCTCCAGCATATCCTGCTGCAGATGCCGGCGGAGCAGATTTCCCACCTTGTCCTGGAGGGGGTCGACCTGT
CCGGGGCCCGTTTCCAGGGTGCCGCGCTGCAGGGGGTGGGGTTCAATGACTGCCGCCTGGAGGGGACGATTTTCAAGCGC
GCCAATCTGCGCGGAGCCAGCCTGCGGGAGGTCTCCATCCGTGGCGCGCTATTCACCAGGGCATCCCTGAACGGCGCCGA
CTTCAGTGATGCCTTTGGGGCGGCGGAGATGATCAAGGTGCACGCTGACGATGCCCGCTTTGACCGGGCTTTGCTGCAGG
AGACGAATTTCGACGGCGCCAGTCTGAAGCGCGCCAGCTTCGTCCGGACGCAGCTGGAGGATGCCTCCCTGCAGGGCGCC
CAGCTGCATGATGCCCGCCTGGAAAACGCCTGGCTGGGAAGGGTGCATGGCCGCAAGCTGGTGGCGCCGGAGGCGTCATT
CCGCCATGTGAAGCTGCAGCACGGGGATCTGGAAGAGGCCCGCCTGACCAAGGCGCTCTTCGAACAGTGCGAACTGAACG
GTGCCCGGGCCAAGGGAATGGATGCCGATGGAGTCATCTTCAGAAACTGCAACCTGGGAGGGGTGGATTTCAGCGGATCA
CGCCTGGCCGATGCCTGTTTTGCGGGTTGCAACCTGGGAGGCGCCGATTTCCGCGGCTCCGTCCTGGAGGGGGCCGAGTT
CAGGCACTGCACCAATGGCGGCTCGGCCCATTTCGACCAAGCCGGACAAGATGGGGCGCGCTTCGTTGAGTGCGGCTGA

Upstream 100 bases:

>100_bases
AGTATGCGTAGATTGGTGGTATATGTCAATGGTGAATGTGGAATACGAGATCAGCCGGCGCTTCTGGCAGGGACGGAAGC
GCAGGTAGGCGAGGTGCCCG

Downstream 100 bases:

>100_bases
ATGCGTTGTCTTTCAGATACTCTCTCGGCGTTTCACGCTTCGGCTTTTCGCCACCAGTTCACCATAAGTGACCAGGAGAA
GCCCCCTGGCCTCTCCTCCA

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MQSGFSPETIKALVDAGGFFFSVLSGAAAGLWALVRWLDDRRDQRLQEERLESARLDQKRLASEQAEQARRAELERREQE
EQGRRAERAANLICEFSKSKTPEERAWTALALGLYPEETLRLLVCSLGQFSEESVQGVQLALVSFGSRAVDEVVRLNRVA
RSFEADRDDEPADGVPLYDTARLLERTKVVLQHILLQMPAEQISHLVLEGVDLSGARFQGAALQGVGFNDCRLEGTIFKR
ANLRGASLREVSIRGALFTRASLNGADFSDAFGAAEMIKVHADDARFDRALLQETNFDGASLKRASFVRTQLEDASLQGA
QLHDARLENAWLGRVHGRKLVAPEASFRHVKLQHGDLEEARLTKALFEQCELNGARAKGMDADGVIFRNCNLGGVDFSGS
RLADACFAGCNLGGADFRGSVLEGAEFRHCTNGGSAHFDQAGQDGARFVECG

Sequences:

>Translated_452_residues
MQSGFSPETIKALVDAGGFFFSVLSGAAAGLWALVRWLDDRRDQRLQEERLESARLDQKRLASEQAEQARRAELERREQE
EQGRRAERAANLICEFSKSKTPEERAWTALALGLYPEETLRLLVCSLGQFSEESVQGVQLALVSFGSRAVDEVVRLNRVA
RSFEADRDDEPADGVPLYDTARLLERTKVVLQHILLQMPAEQISHLVLEGVDLSGARFQGAALQGVGFNDCRLEGTIFKR
ANLRGASLREVSIRGALFTRASLNGADFSDAFGAAEMIKVHADDARFDRALLQETNFDGASLKRASFVRTQLEDASLQGA
QLHDARLENAWLGRVHGRKLVAPEASFRHVKLQHGDLEEARLTKALFEQCELNGARAKGMDADGVIFRNCNLGGVDFSGS
RLADACFAGCNLGGADFRGSVLEGAEFRHCTNGGSAHFDQAGQDGARFVECG
>Mature_452_residues
MQSGFSPETIKALVDAGGFFFSVLSGAAAGLWALVRWLDDRRDQRLQEERLESARLDQKRLASEQAEQARRAELERREQE
EQGRRAERAANLICEFSKSKTPEERAWTALALGLYPEETLRLLVCSLGQFSEESVQGVQLALVSFGSRAVDEVVRLNRVA
RSFEADRDDEPADGVPLYDTARLLERTKVVLQHILLQMPAEQISHLVLEGVDLSGARFQGAALQGVGFNDCRLEGTIFKR
ANLRGASLREVSIRGALFTRASLNGADFSDAFGAAEMIKVHADDARFDRALLQETNFDGASLKRASFVRTQLEDASLQGA
QLHDARLENAWLGRVHGRKLVAPEASFRHVKLQHGDLEEARLTKALFEQCELNGARAKGMDADGVIFRNCNLGGVDFSGS
RLADACFAGCNLGGADFRGSVLEGAEFRHCTNGGSAHFDQAGQDGARFVECG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 49601; Mature: 49601

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSGFSPETIKALVDAGGFFFSVLSGAAAGLWALVRWLDDRRDQRLQEERLESARLDQKR
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LASEQAEQARRAELERREQEEQGRRAERAANLICEFSKSKTPEERAWTALALGLYPEETL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHH
RLLVCSLGQFSEESVQGVQLALVSFGSRAVDEVVRLNRVARSFEADRDDEPADGVPLYDT
HHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
ARLLERTKVVLQHILLQMPAEQISHLVLEGVDLSGARFQGAALQGVGFNDCRLEGTIFKR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCEECCEEEEC
ANLRGASLREVSIRGALFTRASLNGADFSDAFGAAEMIKVHADDARFDRALLQETNFDGA
CCCCCCCCCEEEHHHHHEEECCCCCCCCHHHHCHHHEEEEECCHHHHHHHHHHHCCCCCC
SLKRASFVRTQLEDASLQGAQLHDARLENAWLGRVHGRKLVAPEASFRHVKLQHGDLEEA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEECCCCHHHH
RLTKALFEQCELNGARAKGMDADGVIFRNCNLGGVDFSGSRLADACFAGCNLGGADFRGS
HHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCH
VLEGAEFRHCTNGGSAHFDQAGQDGARFVECG
HHCCCCHHCCCCCCCCCCCCCCCCCCEEECCC
>Mature Secondary Structure
MQSGFSPETIKALVDAGGFFFSVLSGAAAGLWALVRWLDDRRDQRLQEERLESARLDQKR
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LASEQAEQARRAELERREQEEQGRRAERAANLICEFSKSKTPEERAWTALALGLYPEETL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHH
RLLVCSLGQFSEESVQGVQLALVSFGSRAVDEVVRLNRVARSFEADRDDEPADGVPLYDT
HHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
ARLLERTKVVLQHILLQMPAEQISHLVLEGVDLSGARFQGAALQGVGFNDCRLEGTIFKR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCEECCEEEEC
ANLRGASLREVSIRGALFTRASLNGADFSDAFGAAEMIKVHADDARFDRALLQETNFDGA
CCCCCCCCCEEEHHHHHEEECCCCCCCCHHHHCHHHEEEEECCHHHHHHHHHHHCCCCCC
SLKRASFVRTQLEDASLQGAQLHDARLENAWLGRVHGRKLVAPEASFRHVKLQHGDLEEA
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEECCCCHHHH
RLTKALFEQCELNGARAKGMDADGVIFRNCNLGGVDFSGSRLADACFAGCNLGGADFRGS
HHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCH
VLEGAEFRHCTNGGSAHFDQAGQDGARFVECG
HHCCCCHHCCCCCCCCCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA